Protein–RNA interactions for Protein: A0A1B0GSK3

Lnp1, Leukemia NUP98 fusion partner 1, mousemouse

Predictions only

Length 178 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lnp1A0A1B0GSK3 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Lnp1A0A1B0GSK3 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC14.6□□□□□ -0.07
Lnp1A0A1B0GSK3 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Lnp1A0A1B0GSK3 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Lnp1A0A1B0GSK3 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Lnp1A0A1B0GSK3 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Lnp1A0A1B0GSK3 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC14.6□□□□□ -0.07
Lnp1A0A1B0GSK3 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC14.6□□□□□ -0.07
Lnp1A0A1B0GSK3 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
Lnp1A0A1B0GSK3 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Lnp1A0A1B0GSK3 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Lnp1A0A1B0GSK3 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC14.6□□□□□ -0.07
Lnp1A0A1B0GSK3 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC14.6□□□□□ -0.07
Lnp1A0A1B0GSK3 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
Lnp1A0A1B0GSK3 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
Lnp1A0A1B0GSK3 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Lnp1A0A1B0GSK3 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Lnp1A0A1B0GSK3 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
Lnp1A0A1B0GSK3 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Lnp1A0A1B0GSK3 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
Lnp1A0A1B0GSK3 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC14.6□□□□□ -0.07
Lnp1A0A1B0GSK3 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Lnp1A0A1B0GSK3 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Lnp1A0A1B0GSK3 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Lnp1A0A1B0GSK3 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC14.59□□□□□ -0.07
Lnp1A0A1B0GSK3 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
Lnp1A0A1B0GSK3 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
Lnp1A0A1B0GSK3 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Lnp1A0A1B0GSK3 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
Lnp1A0A1B0GSK3 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC14.59□□□□□ -0.07
Lnp1A0A1B0GSK3 Gm37856-201ENSMUST00000191634 999 ntBASIC14.59□□□□□ -0.07
Lnp1A0A1B0GSK3 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Lnp1A0A1B0GSK3 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Lnp1A0A1B0GSK3 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Lnp1A0A1B0GSK3 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Lnp1A0A1B0GSK3 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
Lnp1A0A1B0GSK3 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Lnp1A0A1B0GSK3 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Lnp1A0A1B0GSK3 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Lnp1A0A1B0GSK3 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Lnp1A0A1B0GSK3 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Lnp1A0A1B0GSK3 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Lnp1A0A1B0GSK3 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.07
Lnp1A0A1B0GSK3 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Lnp1A0A1B0GSK3 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.07
Lnp1A0A1B0GSK3 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Lnp1A0A1B0GSK3 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC14.58□□□□□ -0.07
Lnp1A0A1B0GSK3 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Lnp1A0A1B0GSK3 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Lnp1A0A1B0GSK3 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC14.58□□□□□ -0.08
Lnp1A0A1B0GSK3 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Lnp1A0A1B0GSK3 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Lnp1A0A1B0GSK3 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
Lnp1A0A1B0GSK3 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
Lnp1A0A1B0GSK3 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC14.58□□□□□ -0.08
Lnp1A0A1B0GSK3 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Lnp1A0A1B0GSK3 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Lnp1A0A1B0GSK3 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Lnp1A0A1B0GSK3 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC14.58□□□□□ -0.08
Lnp1A0A1B0GSK3 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Lnp1A0A1B0GSK3 Gm10654-201ENSMUST00000098653 1633 ntBASIC14.58□□□□□ -0.08
Lnp1A0A1B0GSK3 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Lnp1A0A1B0GSK3 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
Lnp1A0A1B0GSK3 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Lnp1A0A1B0GSK3 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Lnp1A0A1B0GSK3 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
Lnp1A0A1B0GSK3 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Lnp1A0A1B0GSK3 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
Lnp1A0A1B0GSK3 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Lnp1A0A1B0GSK3 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC14.57□□□□□ -0.08
Lnp1A0A1B0GSK3 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC14.57□□□□□ -0.08
Lnp1A0A1B0GSK3 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Lnp1A0A1B0GSK3 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
Lnp1A0A1B0GSK3 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Lnp1A0A1B0GSK3 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Lnp1A0A1B0GSK3 Trmt13-210ENSMUST00000198454 880 ntBASIC14.57□□□□□ -0.08
Lnp1A0A1B0GSK3 Gm29791-202ENSMUST00000207888 369 ntBASIC14.57□□□□□ -0.08
Lnp1A0A1B0GSK3 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Lnp1A0A1B0GSK3 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Lnp1A0A1B0GSK3 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Lnp1A0A1B0GSK3 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Lnp1A0A1B0GSK3 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Lnp1A0A1B0GSK3 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Lnp1A0A1B0GSK3 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Lnp1A0A1B0GSK3 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Lnp1A0A1B0GSK3 Gm45560-201ENSMUST00000211492 1472 ntBASIC14.57□□□□□ -0.08
Lnp1A0A1B0GSK3 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Lnp1A0A1B0GSK3 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Lnp1A0A1B0GSK3 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Lnp1A0A1B0GSK3 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Lnp1A0A1B0GSK3 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
Lnp1A0A1B0GSK3 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Lnp1A0A1B0GSK3 Gm10138-203ENSMUST00000206952 366 ntBASIC14.56□□□□□ -0.08
Lnp1A0A1B0GSK3 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC14.56□□□□□ -0.08
Lnp1A0A1B0GSK3 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Lnp1A0A1B0GSK3 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Lnp1A0A1B0GSK3 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Lnp1A0A1B0GSK3 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
Lnp1A0A1B0GSK3 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Lnp1A0A1B0GSK3 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 22.4 ms