Protein–RNA interactions for Protein: A0A140LHH9

Gm35339, Predicted gene, 35339, mousemouse

Predictions only

Length 1,649 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm35339A0A140LHH9 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC36.9■■■■□ 3.5
Gm35339A0A140LHH9 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC36.9■■■■□ 3.5
Gm35339A0A140LHH9 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC36.9■■■■□ 3.5
Gm35339A0A140LHH9 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC36.9■■■■□ 3.5
Gm35339A0A140LHH9 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC36.9■■■■□ 3.5
Gm35339A0A140LHH9 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC36.9■■■■□ 3.5
Gm35339A0A140LHH9 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC36.9■■■■□ 3.5
Gm35339A0A140LHH9 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC36.89■■■■□ 3.5
Gm35339A0A140LHH9 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC36.89■■■■□ 3.5
Gm35339A0A140LHH9 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC36.89■■■■□ 3.5
Gm35339A0A140LHH9 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC36.89■■■■□ 3.5
Gm35339A0A140LHH9 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC36.89■■■■□ 3.5
Gm35339A0A140LHH9 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC36.89■■■■□ 3.5
Gm35339A0A140LHH9 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC36.89■■■■□ 3.5
Gm35339A0A140LHH9 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC36.89■■■■□ 3.5
Gm35339A0A140LHH9 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC36.88■■■■□ 3.5
Gm35339A0A140LHH9 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC36.88■■■■□ 3.5
Gm35339A0A140LHH9 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC36.88■■■■□ 3.5
Gm35339A0A140LHH9 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC36.88■■■■□ 3.49
Gm35339A0A140LHH9 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC36.88■■■■□ 3.49
Gm35339A0A140LHH9 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC36.88■■■■□ 3.49
Gm35339A0A140LHH9 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC36.88■■■■□ 3.49
Gm35339A0A140LHH9 Vti1a-206ENSMUST00000225529 1244 ntBASIC36.88■■■■□ 3.49
Gm35339A0A140LHH9 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC36.88■■■■□ 3.49
Gm35339A0A140LHH9 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC36.88■■■■□ 3.49
Gm35339A0A140LHH9 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC36.88■■■■□ 3.49
Gm35339A0A140LHH9 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC36.87■■■■□ 3.49
Gm35339A0A140LHH9 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC36.87■■■■□ 3.49
Gm35339A0A140LHH9 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC36.87■■■■□ 3.49
Gm35339A0A140LHH9 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC36.87■■■■□ 3.49
Gm35339A0A140LHH9 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC36.87■■■■□ 3.49
Gm35339A0A140LHH9 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC36.87■■■■□ 3.49
Gm35339A0A140LHH9 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC36.87■■■■□ 3.49
Gm35339A0A140LHH9 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC36.86■■■■□ 3.49
Gm35339A0A140LHH9 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC36.86■■■■□ 3.49
Gm35339A0A140LHH9 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC36.86■■■■□ 3.49
Gm35339A0A140LHH9 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC36.86■■■■□ 3.49
Gm35339A0A140LHH9 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC36.85■■■■□ 3.49
Gm35339A0A140LHH9 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC36.85■■■■□ 3.49
Gm35339A0A140LHH9 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC36.85■■■■□ 3.49
Gm35339A0A140LHH9 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC36.85■■■■□ 3.49
Gm35339A0A140LHH9 Gm27000-201ENSMUST00000182943 842 ntBASIC36.85■■■■□ 3.49
Gm35339A0A140LHH9 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC36.85■■■■□ 3.49
Gm35339A0A140LHH9 AC138767.1-201ENSMUST00000222661 415 ntBASIC36.85■■■■□ 3.49
Gm35339A0A140LHH9 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC36.85■■■■□ 3.49
Gm35339A0A140LHH9 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC36.85■■■■□ 3.49
Gm35339A0A140LHH9 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC36.85■■■■□ 3.49
Gm35339A0A140LHH9 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC36.85■■■■□ 3.49
Gm35339A0A140LHH9 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC36.85■■■■□ 3.49
Gm35339A0A140LHH9 Gm10052-201ENSMUST00000168019 960 ntBASIC36.85■■■■□ 3.49
Gm35339A0A140LHH9 Mir5126-201ENSMUST00000175513 77 ntBASIC36.85■■■■□ 3.49
Gm35339A0A140LHH9 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC36.85■■■■□ 3.49
Gm35339A0A140LHH9 Gm7729-201ENSMUST00000050143 801 ntBASIC36.85■■■■□ 3.49
Gm35339A0A140LHH9 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC36.84■■■■□ 3.49
Gm35339A0A140LHH9 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC36.84■■■■□ 3.49
Gm35339A0A140LHH9 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC36.84■■■■□ 3.49
Gm35339A0A140LHH9 Gm11452-201ENSMUST00000122376 690 ntBASIC36.84■■■■□ 3.49
Gm35339A0A140LHH9 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC36.84■■■■□ 3.49
Gm35339A0A140LHH9 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC36.84■■■■□ 3.49
Gm35339A0A140LHH9 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC36.84■■■■□ 3.49
Gm35339A0A140LHH9 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC36.83■■■■□ 3.49
Gm35339A0A140LHH9 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC36.83■■■■□ 3.49
Gm35339A0A140LHH9 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC36.83■■■■□ 3.49
Gm35339A0A140LHH9 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC36.83■■■■□ 3.49
Gm35339A0A140LHH9 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC36.82■■■■□ 3.49
Gm35339A0A140LHH9 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC36.82■■■■□ 3.49
Gm35339A0A140LHH9 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC36.82■■■■□ 3.49
Gm35339A0A140LHH9 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC36.82■■■■□ 3.48
Gm35339A0A140LHH9 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC36.82■■■■□ 3.48
Gm35339A0A140LHH9 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC36.82■■■■□ 3.48
Gm35339A0A140LHH9 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC36.81■■■■□ 3.48
Gm35339A0A140LHH9 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC36.81■■■■□ 3.48
Gm35339A0A140LHH9 Gm38160-201ENSMUST00000193090 2499 ntBASIC36.81■■■■□ 3.48
Gm35339A0A140LHH9 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC36.81■■■■□ 3.48
Gm35339A0A140LHH9 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC36.81■■■■□ 3.48
Gm35339A0A140LHH9 Gm18195-201ENSMUST00000207604 706 ntBASIC36.81■■■■□ 3.48
Gm35339A0A140LHH9 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC36.81■■■■□ 3.48
Gm35339A0A140LHH9 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC36.81■■■■□ 3.48
Gm35339A0A140LHH9 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC36.8■■■■□ 3.48
Gm35339A0A140LHH9 Gm43272-201ENSMUST00000200599 1584 ntBASIC36.8■■■■□ 3.48
Gm35339A0A140LHH9 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC36.8■■■■□ 3.48
Gm35339A0A140LHH9 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC36.8■■■■□ 3.48
Gm35339A0A140LHH9 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC36.8■■■■□ 3.48
Gm35339A0A140LHH9 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC36.8■■■■□ 3.48
Gm35339A0A140LHH9 Gm13186-201ENSMUST00000118031 316 ntBASIC36.8■■■■□ 3.48
Gm35339A0A140LHH9 Gm12644-201ENSMUST00000119935 606 ntBASIC36.8■■■■□ 3.48
Gm35339A0A140LHH9 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC36.8■■■■□ 3.48
Gm35339A0A140LHH9 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC36.79■■■■□ 3.48
Gm35339A0A140LHH9 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC36.79■■■■□ 3.48
Gm35339A0A140LHH9 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC36.79■■■■□ 3.48
Gm35339A0A140LHH9 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC36.79■■■■□ 3.48
Gm35339A0A140LHH9 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC36.79■■■■□ 3.48
Gm35339A0A140LHH9 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC36.79■■■■□ 3.48
Gm35339A0A140LHH9 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC36.79■■■■□ 3.48
Gm35339A0A140LHH9 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC36.78■■■■□ 3.48
Gm35339A0A140LHH9 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC36.78■■■■□ 3.48
Gm35339A0A140LHH9 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC36.78■■■■□ 3.48
Gm35339A0A140LHH9 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC36.78■■■■□ 3.48
Gm35339A0A140LHH9 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC36.78■■■■□ 3.48
Gm35339A0A140LHH9 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC36.77■■■■□ 3.48
Retrieved 100 of 76,532 protein–RNA pairs in 23.7 ms