Protein–RNA interactions for Protein: A0A0G2JGB9

Trdv2-1, T cell receptor delta variable 2-1 (Fragment), mousemouse

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trdv2-1A0A0G2JGB9 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trdv2-1A0A0G2JGB9 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC12.92□□□□□ -0.34
Trdv2-1A0A0G2JGB9 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trdv2-1A0A0G2JGB9 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trdv2-1A0A0G2JGB9 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC12.92□□□□□ -0.34
Trdv2-1A0A0G2JGB9 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trdv2-1A0A0G2JGB9 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trdv2-1A0A0G2JGB9 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trdv2-1A0A0G2JGB9 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Trdv2-1A0A0G2JGB9 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Trdv2-1A0A0G2JGB9 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trdv2-1A0A0G2JGB9 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trdv2-1A0A0G2JGB9 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Trdv2-1A0A0G2JGB9 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC12.91□□□□□ -0.34
Trdv2-1A0A0G2JGB9 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trdv2-1A0A0G2JGB9 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trdv2-1A0A0G2JGB9 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Trdv2-1A0A0G2JGB9 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trdv2-1A0A0G2JGB9 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trdv2-1A0A0G2JGB9 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC12.91□□□□□ -0.34
Trdv2-1A0A0G2JGB9 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC12.91□□□□□ -0.34
Trdv2-1A0A0G2JGB9 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trdv2-1A0A0G2JGB9 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trdv2-1A0A0G2JGB9 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC12.91□□□□□ -0.34
Trdv2-1A0A0G2JGB9 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trdv2-1A0A0G2JGB9 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trdv2-1A0A0G2JGB9 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
Trdv2-1A0A0G2JGB9 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trdv2-1A0A0G2JGB9 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trdv2-1A0A0G2JGB9 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Trdv2-1A0A0G2JGB9 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC12.91□□□□□ -0.34
Trdv2-1A0A0G2JGB9 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trdv2-1A0A0G2JGB9 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trdv2-1A0A0G2JGB9 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trdv2-1A0A0G2JGB9 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trdv2-1A0A0G2JGB9 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC12.91□□□□□ -0.34
Trdv2-1A0A0G2JGB9 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Trdv2-1A0A0G2JGB9 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC12.9□□□□□ -0.34
Trdv2-1A0A0G2JGB9 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
Trdv2-1A0A0G2JGB9 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trdv2-1A0A0G2JGB9 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trdv2-1A0A0G2JGB9 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trdv2-1A0A0G2JGB9 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trdv2-1A0A0G2JGB9 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC12.9□□□□□ -0.34
Trdv2-1A0A0G2JGB9 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trdv2-1A0A0G2JGB9 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Trdv2-1A0A0G2JGB9 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trdv2-1A0A0G2JGB9 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trdv2-1A0A0G2JGB9 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC12.9□□□□□ -0.34
Trdv2-1A0A0G2JGB9 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trdv2-1A0A0G2JGB9 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trdv2-1A0A0G2JGB9 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trdv2-1A0A0G2JGB9 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trdv2-1A0A0G2JGB9 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trdv2-1A0A0G2JGB9 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trdv2-1A0A0G2JGB9 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trdv2-1A0A0G2JGB9 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC12.9□□□□□ -0.35
Trdv2-1A0A0G2JGB9 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC12.9□□□□□ -0.35
Trdv2-1A0A0G2JGB9 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trdv2-1A0A0G2JGB9 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Trdv2-1A0A0G2JGB9 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trdv2-1A0A0G2JGB9 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC12.89□□□□□ -0.35
Trdv2-1A0A0G2JGB9 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Trdv2-1A0A0G2JGB9 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Trdv2-1A0A0G2JGB9 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trdv2-1A0A0G2JGB9 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trdv2-1A0A0G2JGB9 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC12.89□□□□□ -0.35
Trdv2-1A0A0G2JGB9 Gm5812-201ENSMUST00000061073 957 ntBASIC12.89□□□□□ -0.35
Trdv2-1A0A0G2JGB9 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Trdv2-1A0A0G2JGB9 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trdv2-1A0A0G2JGB9 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trdv2-1A0A0G2JGB9 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trdv2-1A0A0G2JGB9 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Trdv2-1A0A0G2JGB9 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Trdv2-1A0A0G2JGB9 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
Trdv2-1A0A0G2JGB9 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC12.89□□□□□ -0.35
Trdv2-1A0A0G2JGB9 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trdv2-1A0A0G2JGB9 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trdv2-1A0A0G2JGB9 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trdv2-1A0A0G2JGB9 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trdv2-1A0A0G2JGB9 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trdv2-1A0A0G2JGB9 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Trdv2-1A0A0G2JGB9 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trdv2-1A0A0G2JGB9 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trdv2-1A0A0G2JGB9 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trdv2-1A0A0G2JGB9 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trdv2-1A0A0G2JGB9 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trdv2-1A0A0G2JGB9 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trdv2-1A0A0G2JGB9 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trdv2-1A0A0G2JGB9 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Trdv2-1A0A0G2JGB9 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC12.88□□□□□ -0.35
Trdv2-1A0A0G2JGB9 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC12.88□□□□□ -0.35
Trdv2-1A0A0G2JGB9 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC12.88□□□□□ -0.35
Trdv2-1A0A0G2JGB9 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trdv2-1A0A0G2JGB9 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trdv2-1A0A0G2JGB9 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
Trdv2-1A0A0G2JGB9 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trdv2-1A0A0G2JGB9 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trdv2-1A0A0G2JGB9 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trdv2-1A0A0G2JGB9 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 22.3 ms