Protein–RNA interactions for Protein: A0A0G2JG37

Trav9d-4, T cell receptor alpha variable 9D-4 (Fragment), mousemouse

Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9d-4A0A0G2JG37 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav9d-4A0A0G2JG37 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav9d-4A0A0G2JG37 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav9d-4A0A0G2JG37 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav9d-4A0A0G2JG37 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav9d-4A0A0G2JG37 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Trav9d-4A0A0G2JG37 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC12.05□□□□□ -0.48
Trav9d-4A0A0G2JG37 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav9d-4A0A0G2JG37 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Trav9d-4A0A0G2JG37 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav9d-4A0A0G2JG37 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
Trav9d-4A0A0G2JG37 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav9d-4A0A0G2JG37 Gm12251-201ENSMUST00000117893 792 ntBASIC12.05□□□□□ -0.48
Trav9d-4A0A0G2JG37 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC12.05□□□□□ -0.48
Trav9d-4A0A0G2JG37 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC12.05□□□□□ -0.48
Trav9d-4A0A0G2JG37 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC12.05□□□□□ -0.48
Trav9d-4A0A0G2JG37 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Trav9d-4A0A0G2JG37 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Trav9d-4A0A0G2JG37 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Trav9d-4A0A0G2JG37 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav9d-4A0A0G2JG37 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC12.05□□□□□ -0.48
Trav9d-4A0A0G2JG37 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Trav9d-4A0A0G2JG37 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Trav9d-4A0A0G2JG37 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
Trav9d-4A0A0G2JG37 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Trav9d-4A0A0G2JG37 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav9d-4A0A0G2JG37 Gm37374-201ENSMUST00000194954 1829 ntBASIC12.04□□□□□ -0.48
Trav9d-4A0A0G2JG37 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC12.04□□□□□ -0.48
Trav9d-4A0A0G2JG37 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav9d-4A0A0G2JG37 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Trav9d-4A0A0G2JG37 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC12.04□□□□□ -0.48
Trav9d-4A0A0G2JG37 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC12.04□□□□□ -0.48
Trav9d-4A0A0G2JG37 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Trav9d-4A0A0G2JG37 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Trav9d-4A0A0G2JG37 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Trav9d-4A0A0G2JG37 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav9d-4A0A0G2JG37 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Trav9d-4A0A0G2JG37 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC12.04□□□□□ -0.48
Trav9d-4A0A0G2JG37 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav9d-4A0A0G2JG37 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav9d-4A0A0G2JG37 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav9d-4A0A0G2JG37 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav9d-4A0A0G2JG37 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Trav9d-4A0A0G2JG37 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav9d-4A0A0G2JG37 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav9d-4A0A0G2JG37 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav9d-4A0A0G2JG37 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Trav9d-4A0A0G2JG37 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav9d-4A0A0G2JG37 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav9d-4A0A0G2JG37 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Trav9d-4A0A0G2JG37 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav9d-4A0A0G2JG37 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav9d-4A0A0G2JG37 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Trav9d-4A0A0G2JG37 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav9d-4A0A0G2JG37 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC12.03□□□□□ -0.48
Trav9d-4A0A0G2JG37 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav9d-4A0A0G2JG37 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Trav9d-4A0A0G2JG37 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Trav9d-4A0A0G2JG37 Mir7075-201ENSMUST00000184187 82 ntBASIC12.03□□□□□ -0.48
Trav9d-4A0A0G2JG37 Flvcr1-202ENSMUST00000191946 1216 ntBASIC12.03□□□□□ -0.48
Trav9d-4A0A0G2JG37 Wdr70-203ENSMUST00000227371 1130 ntBASIC12.03□□□□□ -0.48
Trav9d-4A0A0G2JG37 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Trav9d-4A0A0G2JG37 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav9d-4A0A0G2JG37 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav9d-4A0A0G2JG37 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav9d-4A0A0G2JG37 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav9d-4A0A0G2JG37 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav9d-4A0A0G2JG37 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav9d-4A0A0G2JG37 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav9d-4A0A0G2JG37 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav9d-4A0A0G2JG37 Arhgef12-202ENSMUST00000165665 10752 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav9d-4A0A0G2JG37 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Trav9d-4A0A0G2JG37 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC12.03□□□□□ -0.48
Trav9d-4A0A0G2JG37 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Trav9d-4A0A0G2JG37 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Trav9d-4A0A0G2JG37 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Trav9d-4A0A0G2JG37 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Trav9d-4A0A0G2JG37 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Trav9d-4A0A0G2JG37 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Trav9d-4A0A0G2JG37 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Trav9d-4A0A0G2JG37 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC12.02□□□□□ -0.48
Trav9d-4A0A0G2JG37 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav9d-4A0A0G2JG37 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Trav9d-4A0A0G2JG37 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav9d-4A0A0G2JG37 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav9d-4A0A0G2JG37 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC12.02□□□□□ -0.49
Trav9d-4A0A0G2JG37 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav9d-4A0A0G2JG37 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav9d-4A0A0G2JG37 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC12.02□□□□□ -0.49
Trav9d-4A0A0G2JG37 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav9d-4A0A0G2JG37 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Trav9d-4A0A0G2JG37 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav9d-4A0A0G2JG37 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC12.02□□□□□ -0.49
Trav9d-4A0A0G2JG37 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav9d-4A0A0G2JG37 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC12.02□□□□□ -0.49
Trav9d-4A0A0G2JG37 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC12.02□□□□□ -0.49
Trav9d-4A0A0G2JG37 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav9d-4A0A0G2JG37 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav9d-4A0A0G2JG37 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC12.01□□□□□ -0.49
Trav9d-4A0A0G2JG37 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 22 ms