Protein–RNA interactions for Protein: A0A0G2JF93

Trav13n-2, T cell receptor alpha variable 13D-2 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13n-2A0A0G2JF93 Gm22238-201ENSMUST00000175222 88 ntBASIC11.65□□□□□ -0.54
Trav13n-2A0A0G2JF93 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC11.65□□□□□ -0.54
Trav13n-2A0A0G2JF93 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Trav13n-2A0A0G2JF93 Rps24-207ENSMUST00000224568 714 ntBASIC11.65□□□□□ -0.54
Trav13n-2A0A0G2JF93 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC11.65□□□□□ -0.54
Trav13n-2A0A0G2JF93 Gm9959-201ENSMUST00000068277 390 ntBASIC11.65□□□□□ -0.54
Trav13n-2A0A0G2JF93 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC11.65□□□□□ -0.54
Trav13n-2A0A0G2JF93 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC11.65□□□□□ -0.54
Trav13n-2A0A0G2JF93 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC11.65□□□□□ -0.54
Trav13n-2A0A0G2JF93 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.54
Trav13n-2A0A0G2JF93 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav13n-2A0A0G2JF93 Gm43672-201ENSMUST00000199072 1731 ntBASIC11.65□□□□□ -0.54
Trav13n-2A0A0G2JF93 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav13n-2A0A0G2JF93 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC11.65□□□□□ -0.54
Trav13n-2A0A0G2JF93 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.54
Trav13n-2A0A0G2JF93 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
Trav13n-2A0A0G2JF93 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC11.65□□□□□ -0.55
Trav13n-2A0A0G2JF93 Gm43808-201ENSMUST00000202534 2065 ntBASIC11.64□□□□□ -0.55
Trav13n-2A0A0G2JF93 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav13n-2A0A0G2JF93 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav13n-2A0A0G2JF93 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav13n-2A0A0G2JF93 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC11.64□□□□□ -0.55
Trav13n-2A0A0G2JF93 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav13n-2A0A0G2JF93 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav13n-2A0A0G2JF93 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC11.64□□□□□ -0.55
Trav13n-2A0A0G2JF93 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav13n-2A0A0G2JF93 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav13n-2A0A0G2JF93 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC11.64□□□□□ -0.55
Trav13n-2A0A0G2JF93 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC11.64□□□□□ -0.55
Trav13n-2A0A0G2JF93 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Trav13n-2A0A0G2JF93 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC11.64□□□□□ -0.55
Trav13n-2A0A0G2JF93 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav13n-2A0A0G2JF93 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav13n-2A0A0G2JF93 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC11.64□□□□□ -0.55
Trav13n-2A0A0G2JF93 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav13n-2A0A0G2JF93 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav13n-2A0A0G2JF93 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav13n-2A0A0G2JF93 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav13n-2A0A0G2JF93 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC11.64□□□□□ -0.55
Trav13n-2A0A0G2JF93 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav13n-2A0A0G2JF93 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav13n-2A0A0G2JF93 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav13n-2A0A0G2JF93 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav13n-2A0A0G2JF93 Tgds-204ENSMUST00000228543 1594 ntBASIC11.63□□□□□ -0.55
Trav13n-2A0A0G2JF93 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Trav13n-2A0A0G2JF93 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav13n-2A0A0G2JF93 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC11.63□□□□□ -0.55
Trav13n-2A0A0G2JF93 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav13n-2A0A0G2JF93 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Trav13n-2A0A0G2JF93 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC11.63□□□□□ -0.55
Trav13n-2A0A0G2JF93 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav13n-2A0A0G2JF93 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav13n-2A0A0G2JF93 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav13n-2A0A0G2JF93 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav13n-2A0A0G2JF93 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav13n-2A0A0G2JF93 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav13n-2A0A0G2JF93 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Trav13n-2A0A0G2JF93 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav13n-2A0A0G2JF93 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav13n-2A0A0G2JF93 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav13n-2A0A0G2JF93 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Trav13n-2A0A0G2JF93 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Trav13n-2A0A0G2JF93 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav13n-2A0A0G2JF93 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav13n-2A0A0G2JF93 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav13n-2A0A0G2JF93 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC11.63□□□□□ -0.55
Trav13n-2A0A0G2JF93 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC11.62□□□□□ -0.55
Trav13n-2A0A0G2JF93 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC11.62□□□□□ -0.55
Trav13n-2A0A0G2JF93 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav13n-2A0A0G2JF93 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Trav13n-2A0A0G2JF93 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav13n-2A0A0G2JF93 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav13n-2A0A0G2JF93 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav13n-2A0A0G2JF93 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav13n-2A0A0G2JF93 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC11.62□□□□□ -0.55
Trav13n-2A0A0G2JF93 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav13n-2A0A0G2JF93 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav13n-2A0A0G2JF93 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav13n-2A0A0G2JF93 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav13n-2A0A0G2JF93 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav13n-2A0A0G2JF93 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav13n-2A0A0G2JF93 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
Trav13n-2A0A0G2JF93 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav13n-2A0A0G2JF93 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.55
Trav13n-2A0A0G2JF93 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC11.62□□□□□ -0.55
Trav13n-2A0A0G2JF93 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav13n-2A0A0G2JF93 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav13n-2A0A0G2JF93 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav13n-2A0A0G2JF93 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav13n-2A0A0G2JF93 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav13n-2A0A0G2JF93 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav13n-2A0A0G2JF93 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav13n-2A0A0G2JF93 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav13n-2A0A0G2JF93 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav13n-2A0A0G2JF93 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC11.61□□□□□ -0.55
Trav13n-2A0A0G2JF93 Gm37374-201ENSMUST00000194954 1829 ntBASIC11.61□□□□□ -0.55
Trav13n-2A0A0G2JF93 Gm14117-201ENSMUST00000122417 843 ntBASIC11.61□□□□□ -0.55
Trav13n-2A0A0G2JF93 Gm37805-201ENSMUST00000192612 1094 ntBASIC11.61□□□□□ -0.55
Trav13n-2A0A0G2JF93 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC11.61□□□□□ -0.55
Trav13n-2A0A0G2JF93 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC11.61□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 44.2 ms