Protein–RNA interactions for Protein: A0A0B4J1K2

Trav9-4, T cell receptor alpha variable 9-4 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9-4A0A0B4J1K2 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav9-4A0A0B4J1K2 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav9-4A0A0B4J1K2 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav9-4A0A0B4J1K2 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav9-4A0A0B4J1K2 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Trav9-4A0A0B4J1K2 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav9-4A0A0B4J1K2 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Trav9-4A0A0B4J1K2 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav9-4A0A0B4J1K2 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC13.17□□□□□ -0.3
Trav9-4A0A0B4J1K2 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC13.17□□□□□ -0.3
Trav9-4A0A0B4J1K2 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC13.17□□□□□ -0.3
Trav9-4A0A0B4J1K2 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
Trav9-4A0A0B4J1K2 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav9-4A0A0B4J1K2 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav9-4A0A0B4J1K2 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav9-4A0A0B4J1K2 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav9-4A0A0B4J1K2 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Trav9-4A0A0B4J1K2 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Trav9-4A0A0B4J1K2 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Trav9-4A0A0B4J1K2 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav9-4A0A0B4J1K2 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav9-4A0A0B4J1K2 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav9-4A0A0B4J1K2 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Trav9-4A0A0B4J1K2 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav9-4A0A0B4J1K2 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Trav9-4A0A0B4J1K2 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Trav9-4A0A0B4J1K2 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Trav9-4A0A0B4J1K2 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC13.16□□□□□ -0.3
Trav9-4A0A0B4J1K2 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Trav9-4A0A0B4J1K2 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC13.16□□□□□ -0.3
Trav9-4A0A0B4J1K2 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC13.16□□□□□ -0.3
Trav9-4A0A0B4J1K2 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Trav9-4A0A0B4J1K2 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav9-4A0A0B4J1K2 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav9-4A0A0B4J1K2 Gm37194-201ENSMUST00000193092 3031 ntBASIC13.16□□□□□ -0.3
Trav9-4A0A0B4J1K2 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav9-4A0A0B4J1K2 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav9-4A0A0B4J1K2 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav9-4A0A0B4J1K2 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC13.16□□□□□ -0.3
Trav9-4A0A0B4J1K2 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav9-4A0A0B4J1K2 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC13.16□□□□□ -0.3
Trav9-4A0A0B4J1K2 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav9-4A0A0B4J1K2 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav9-4A0A0B4J1K2 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav9-4A0A0B4J1K2 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav9-4A0A0B4J1K2 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Trav9-4A0A0B4J1K2 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav9-4A0A0B4J1K2 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav9-4A0A0B4J1K2 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
Trav9-4A0A0B4J1K2 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Trav9-4A0A0B4J1K2 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav9-4A0A0B4J1K2 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav9-4A0A0B4J1K2 Gm10418-201ENSMUST00000100943 576 ntBASIC13.15□□□□□ -0.3
Trav9-4A0A0B4J1K2 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC13.15□□□□□ -0.3
Trav9-4A0A0B4J1K2 Gm15378-201ENSMUST00000121894 207 ntBASIC13.15□□□□□ -0.3
Trav9-4A0A0B4J1K2 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Trav9-4A0A0B4J1K2 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Trav9-4A0A0B4J1K2 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC13.15□□□□□ -0.3
Trav9-4A0A0B4J1K2 Gm10698-201ENSMUST00000182663 604 ntBASIC13.15□□□□□ -0.3
Trav9-4A0A0B4J1K2 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC13.15□□□□□ -0.3
Trav9-4A0A0B4J1K2 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC13.15□□□□□ -0.3
Trav9-4A0A0B4J1K2 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Trav9-4A0A0B4J1K2 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav9-4A0A0B4J1K2 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav9-4A0A0B4J1K2 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Trav9-4A0A0B4J1K2 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Trav9-4A0A0B4J1K2 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Trav9-4A0A0B4J1K2 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav9-4A0A0B4J1K2 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav9-4A0A0B4J1K2 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
Trav9-4A0A0B4J1K2 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav9-4A0A0B4J1K2 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav9-4A0A0B4J1K2 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav9-4A0A0B4J1K2 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Trav9-4A0A0B4J1K2 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
Trav9-4A0A0B4J1K2 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav9-4A0A0B4J1K2 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav9-4A0A0B4J1K2 Gm12382-201ENSMUST00000122005 922 ntBASIC13.14□□□□□ -0.31
Trav9-4A0A0B4J1K2 Gm22240-201ENSMUST00000175225 82 ntBASIC13.14□□□□□ -0.31
Trav9-4A0A0B4J1K2 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
Trav9-4A0A0B4J1K2 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Trav9-4A0A0B4J1K2 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
Trav9-4A0A0B4J1K2 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav9-4A0A0B4J1K2 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC13.14□□□□□ -0.31
Trav9-4A0A0B4J1K2 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav9-4A0A0B4J1K2 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Trav9-4A0A0B4J1K2 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav9-4A0A0B4J1K2 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Trav9-4A0A0B4J1K2 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Trav9-4A0A0B4J1K2 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav9-4A0A0B4J1K2 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav9-4A0A0B4J1K2 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav9-4A0A0B4J1K2 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Trav9-4A0A0B4J1K2 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC13.13□□□□□ -0.31
Trav9-4A0A0B4J1K2 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Trav9-4A0A0B4J1K2 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav9-4A0A0B4J1K2 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Trav9-4A0A0B4J1K2 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC13.13□□□□□ -0.31
Trav9-4A0A0B4J1K2 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Trav9-4A0A0B4J1K2 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 22 ms