Protein–RNA interactions for Protein: A0A0B4J1J8

Tcrg-V4, T cell receptor gamma, variable 4 (Fragment), mousemouse

Predictions only

Length 138 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tcrg-V4A0A0B4J1J8 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC13.21□□□□□ -0.29
Tcrg-V4A0A0B4J1J8 Gm32699-201ENSMUST00000221728 1988 ntBASIC13.21□□□□□ -0.29
Tcrg-V4A0A0B4J1J8 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Tcrg-V4A0A0B4J1J8 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Tcrg-V4A0A0B4J1J8 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Tcrg-V4A0A0B4J1J8 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Tcrg-V4A0A0B4J1J8 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Tcrg-V4A0A0B4J1J8 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Tcrg-V4A0A0B4J1J8 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Tcrg-V4A0A0B4J1J8 Gm45546-201ENSMUST00000211053 2394 ntBASIC13.21□□□□□ -0.29
Tcrg-V4A0A0B4J1J8 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Tcrg-V4A0A0B4J1J8 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC13.21□□□□□ -0.29
Tcrg-V4A0A0B4J1J8 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC13.21□□□□□ -0.29
Tcrg-V4A0A0B4J1J8 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
Tcrg-V4A0A0B4J1J8 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
Tcrg-V4A0A0B4J1J8 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC13.21□□□□□ -0.29
Tcrg-V4A0A0B4J1J8 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC13.21□□□□□ -0.29
Tcrg-V4A0A0B4J1J8 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Tcrg-V4A0A0B4J1J8 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
Tcrg-V4A0A0B4J1J8 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
Tcrg-V4A0A0B4J1J8 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
Tcrg-V4A0A0B4J1J8 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Tcrg-V4A0A0B4J1J8 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC13.21□□□□□ -0.3
Tcrg-V4A0A0B4J1J8 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.3
Tcrg-V4A0A0B4J1J8 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Tcrg-V4A0A0B4J1J8 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.3
Tcrg-V4A0A0B4J1J8 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Tcrg-V4A0A0B4J1J8 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Tcrg-V4A0A0B4J1J8 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Tcrg-V4A0A0B4J1J8 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Tcrg-V4A0A0B4J1J8 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Tcrg-V4A0A0B4J1J8 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Tcrg-V4A0A0B4J1J8 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Tcrg-V4A0A0B4J1J8 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Tcrg-V4A0A0B4J1J8 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Tcrg-V4A0A0B4J1J8 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Tcrg-V4A0A0B4J1J8 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Tcrg-V4A0A0B4J1J8 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC13.2□□□□□ -0.3
Tcrg-V4A0A0B4J1J8 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Tcrg-V4A0A0B4J1J8 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Tcrg-V4A0A0B4J1J8 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Tcrg-V4A0A0B4J1J8 AC154266.1-201ENSMUST00000223190 503 ntBASIC13.2□□□□□ -0.3
Tcrg-V4A0A0B4J1J8 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Tcrg-V4A0A0B4J1J8 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Tcrg-V4A0A0B4J1J8 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Tcrg-V4A0A0B4J1J8 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Tcrg-V4A0A0B4J1J8 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Tcrg-V4A0A0B4J1J8 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Tcrg-V4A0A0B4J1J8 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Tcrg-V4A0A0B4J1J8 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Tcrg-V4A0A0B4J1J8 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Tcrg-V4A0A0B4J1J8 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Tcrg-V4A0A0B4J1J8 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC13.2□□□□□ -0.3
Tcrg-V4A0A0B4J1J8 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Tcrg-V4A0A0B4J1J8 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC13.2□□□□□ -0.3
Tcrg-V4A0A0B4J1J8 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Tcrg-V4A0A0B4J1J8 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Tcrg-V4A0A0B4J1J8 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Tcrg-V4A0A0B4J1J8 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Tcrg-V4A0A0B4J1J8 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Tcrg-V4A0A0B4J1J8 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Tcrg-V4A0A0B4J1J8 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Tcrg-V4A0A0B4J1J8 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Tcrg-V4A0A0B4J1J8 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Tcrg-V4A0A0B4J1J8 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Tcrg-V4A0A0B4J1J8 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC13.19□□□□□ -0.3
Tcrg-V4A0A0B4J1J8 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Tcrg-V4A0A0B4J1J8 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC13.19□□□□□ -0.3
Tcrg-V4A0A0B4J1J8 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC13.19□□□□□ -0.3
Tcrg-V4A0A0B4J1J8 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Tcrg-V4A0A0B4J1J8 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Tcrg-V4A0A0B4J1J8 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Tcrg-V4A0A0B4J1J8 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Tcrg-V4A0A0B4J1J8 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Tcrg-V4A0A0B4J1J8 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC13.19□□□□□ -0.3
Tcrg-V4A0A0B4J1J8 AC153526.5-201ENSMUST00000218661 2147 ntBASIC13.19□□□□□ -0.3
Tcrg-V4A0A0B4J1J8 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Tcrg-V4A0A0B4J1J8 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Tcrg-V4A0A0B4J1J8 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Tcrg-V4A0A0B4J1J8 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Tcrg-V4A0A0B4J1J8 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Tcrg-V4A0A0B4J1J8 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Tcrg-V4A0A0B4J1J8 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Tcrg-V4A0A0B4J1J8 Dnajc6-202ENSMUST00000094953 5322 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Tcrg-V4A0A0B4J1J8 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Tcrg-V4A0A0B4J1J8 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Tcrg-V4A0A0B4J1J8 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Tcrg-V4A0A0B4J1J8 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Tcrg-V4A0A0B4J1J8 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Tcrg-V4A0A0B4J1J8 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Tcrg-V4A0A0B4J1J8 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Tcrg-V4A0A0B4J1J8 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC13.18□□□□□ -0.3
Tcrg-V4A0A0B4J1J8 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Tcrg-V4A0A0B4J1J8 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Tcrg-V4A0A0B4J1J8 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Tcrg-V4A0A0B4J1J8 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Tcrg-V4A0A0B4J1J8 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Tcrg-V4A0A0B4J1J8 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Tcrg-V4A0A0B4J1J8 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Tcrg-V4A0A0B4J1J8 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 31.6 ms