Protein–RNA interactions for Protein: A0A0A6YYP6

Sirpb1a, Signal-regulatory protein beta 1A, mousemouse

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sirpb1aA0A0A6YYP6 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Sirpb1aA0A0A6YYP6 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Sirpb1aA0A0A6YYP6 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Sirpb1aA0A0A6YYP6 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Sirpb1aA0A0A6YYP6 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC16.66■□□□□ 0.26
Sirpb1aA0A0A6YYP6 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Sirpb1aA0A0A6YYP6 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Sirpb1aA0A0A6YYP6 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Sirpb1aA0A0A6YYP6 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC16.65■□□□□ 0.26
Sirpb1aA0A0A6YYP6 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Sirpb1aA0A0A6YYP6 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Sirpb1aA0A0A6YYP6 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Sirpb1aA0A0A6YYP6 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Sirpb1aA0A0A6YYP6 Gm15743-202ENSMUST00000182690 1901 ntBASIC16.65■□□□□ 0.26
Sirpb1aA0A0A6YYP6 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC16.65■□□□□ 0.26
Sirpb1aA0A0A6YYP6 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Sirpb1aA0A0A6YYP6 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC16.65■□□□□ 0.26
Sirpb1aA0A0A6YYP6 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC16.65■□□□□ 0.26
Sirpb1aA0A0A6YYP6 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Sirpb1aA0A0A6YYP6 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Sirpb1aA0A0A6YYP6 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Sirpb1aA0A0A6YYP6 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Sirpb1aA0A0A6YYP6 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Sirpb1aA0A0A6YYP6 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Sirpb1aA0A0A6YYP6 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.25
Sirpb1aA0A0A6YYP6 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Sirpb1aA0A0A6YYP6 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Sirpb1aA0A0A6YYP6 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC16.64■□□□□ 0.25
Sirpb1aA0A0A6YYP6 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Sirpb1aA0A0A6YYP6 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Sirpb1aA0A0A6YYP6 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC16.64■□□□□ 0.25
Sirpb1aA0A0A6YYP6 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC16.64■□□□□ 0.25
Sirpb1aA0A0A6YYP6 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Sirpb1aA0A0A6YYP6 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Sirpb1aA0A0A6YYP6 Gm6420-201ENSMUST00000193885 723 ntBASIC16.64■□□□□ 0.25
Sirpb1aA0A0A6YYP6 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Sirpb1aA0A0A6YYP6 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Sirpb1aA0A0A6YYP6 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
Sirpb1aA0A0A6YYP6 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Sirpb1aA0A0A6YYP6 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
Sirpb1aA0A0A6YYP6 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC16.64■□□□□ 0.25
Sirpb1aA0A0A6YYP6 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Sirpb1aA0A0A6YYP6 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Sirpb1aA0A0A6YYP6 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Sirpb1aA0A0A6YYP6 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Sirpb1aA0A0A6YYP6 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Sirpb1aA0A0A6YYP6 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Sirpb1aA0A0A6YYP6 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Sirpb1aA0A0A6YYP6 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Sirpb1aA0A0A6YYP6 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC16.63■□□□□ 0.25
Sirpb1aA0A0A6YYP6 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Sirpb1aA0A0A6YYP6 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Sirpb1aA0A0A6YYP6 Nespas-201ENSMUST00000143738 1083 ntBASIC16.63■□□□□ 0.25
Sirpb1aA0A0A6YYP6 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC16.63■□□□□ 0.25
Sirpb1aA0A0A6YYP6 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
Sirpb1aA0A0A6YYP6 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Sirpb1aA0A0A6YYP6 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Sirpb1aA0A0A6YYP6 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Sirpb1aA0A0A6YYP6 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Sirpb1aA0A0A6YYP6 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Sirpb1aA0A0A6YYP6 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Sirpb1aA0A0A6YYP6 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Sirpb1aA0A0A6YYP6 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Sirpb1aA0A0A6YYP6 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Sirpb1aA0A0A6YYP6 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Sirpb1aA0A0A6YYP6 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Sirpb1aA0A0A6YYP6 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Sirpb1aA0A0A6YYP6 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Sirpb1aA0A0A6YYP6 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Sirpb1aA0A0A6YYP6 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Sirpb1aA0A0A6YYP6 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Sirpb1aA0A0A6YYP6 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Sirpb1aA0A0A6YYP6 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Sirpb1aA0A0A6YYP6 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
Sirpb1aA0A0A6YYP6 AC164629.5-201ENSMUST00000220387 632 ntBASIC16.62■□□□□ 0.25
Sirpb1aA0A0A6YYP6 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Sirpb1aA0A0A6YYP6 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Sirpb1aA0A0A6YYP6 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC16.62■□□□□ 0.25
Sirpb1aA0A0A6YYP6 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Sirpb1aA0A0A6YYP6 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC16.62■□□□□ 0.25
Sirpb1aA0A0A6YYP6 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC16.62■□□□□ 0.25
Sirpb1aA0A0A6YYP6 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Sirpb1aA0A0A6YYP6 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Sirpb1aA0A0A6YYP6 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Sirpb1aA0A0A6YYP6 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC16.62■□□□□ 0.25
Sirpb1aA0A0A6YYP6 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Sirpb1aA0A0A6YYP6 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Sirpb1aA0A0A6YYP6 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Sirpb1aA0A0A6YYP6 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Sirpb1aA0A0A6YYP6 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Sirpb1aA0A0A6YYP6 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC16.61■□□□□ 0.25
Sirpb1aA0A0A6YYP6 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Sirpb1aA0A0A6YYP6 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC16.61■□□□□ 0.25
Sirpb1aA0A0A6YYP6 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC16.61■□□□□ 0.25
Sirpb1aA0A0A6YYP6 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Sirpb1aA0A0A6YYP6 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC16.61■□□□□ 0.25
Sirpb1aA0A0A6YYP6 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Sirpb1aA0A0A6YYP6 Gm29257-201ENSMUST00000186115 639 ntBASIC16.61■□□□□ 0.25
Sirpb1aA0A0A6YYP6 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
Sirpb1aA0A0A6YYP6 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC16.61■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 31.8 ms