Protein–RNA interactions for Protein: A0A0A6YXN5

Ighv1-43, Immunoglobulin heavy variable V1-43 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-43A0A0A6YXN5 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.18
Ighv1-43A0A0A6YXN5 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
Ighv1-43A0A0A6YXN5 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC16.21■□□□□ 0.18
Ighv1-43A0A0A6YXN5 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ighv1-43A0A0A6YXN5 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
Ighv1-43A0A0A6YXN5 Dmtn-210ENSMUST00000228824 2377 ntBASIC16.2■□□□□ 0.18
Ighv1-43A0A0A6YXN5 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ighv1-43A0A0A6YXN5 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Ighv1-43A0A0A6YXN5 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Ighv1-43A0A0A6YXN5 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Ighv1-43A0A0A6YXN5 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ighv1-43A0A0A6YXN5 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
Ighv1-43A0A0A6YXN5 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
Ighv1-43A0A0A6YXN5 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Ighv1-43A0A0A6YXN5 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
Ighv1-43A0A0A6YXN5 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Ighv1-43A0A0A6YXN5 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ighv1-43A0A0A6YXN5 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC16.2■□□□□ 0.18
Ighv1-43A0A0A6YXN5 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ighv1-43A0A0A6YXN5 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ighv1-43A0A0A6YXN5 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ighv1-43A0A0A6YXN5 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC16.2■□□□□ 0.18
Ighv1-43A0A0A6YXN5 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ighv1-43A0A0A6YXN5 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ighv1-43A0A0A6YXN5 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
Ighv1-43A0A0A6YXN5 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ighv1-43A0A0A6YXN5 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ighv1-43A0A0A6YXN5 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
Ighv1-43A0A0A6YXN5 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC16.19■□□□□ 0.18
Ighv1-43A0A0A6YXN5 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ighv1-43A0A0A6YXN5 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ighv1-43A0A0A6YXN5 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ighv1-43A0A0A6YXN5 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ighv1-43A0A0A6YXN5 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC16.18■□□□□ 0.18
Ighv1-43A0A0A6YXN5 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
Ighv1-43A0A0A6YXN5 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Ighv1-43A0A0A6YXN5 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Ighv1-43A0A0A6YXN5 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ighv1-43A0A0A6YXN5 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ighv1-43A0A0A6YXN5 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
Ighv1-43A0A0A6YXN5 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Ighv1-43A0A0A6YXN5 Gm7791-201ENSMUST00000219066 539 ntBASIC16.18■□□□□ 0.18
Ighv1-43A0A0A6YXN5 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ighv1-43A0A0A6YXN5 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ighv1-43A0A0A6YXN5 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
Ighv1-43A0A0A6YXN5 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ighv1-43A0A0A6YXN5 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC16.17■□□□□ 0.18
Ighv1-43A0A0A6YXN5 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC16.17■□□□□ 0.18
Ighv1-43A0A0A6YXN5 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ighv1-43A0A0A6YXN5 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ighv1-43A0A0A6YXN5 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ighv1-43A0A0A6YXN5 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
Ighv1-43A0A0A6YXN5 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC16.17■□□□□ 0.18
Ighv1-43A0A0A6YXN5 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ighv1-43A0A0A6YXN5 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC16.17■□□□□ 0.18
Ighv1-43A0A0A6YXN5 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC16.17■□□□□ 0.18
Ighv1-43A0A0A6YXN5 Gm9731-201ENSMUST00000209480 747 ntBASIC16.17■□□□□ 0.18
Ighv1-43A0A0A6YXN5 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Ighv1-43A0A0A6YXN5 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ighv1-43A0A0A6YXN5 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ighv1-43A0A0A6YXN5 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ighv1-43A0A0A6YXN5 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ighv1-43A0A0A6YXN5 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Ighv1-43A0A0A6YXN5 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
Ighv1-43A0A0A6YXN5 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Ighv1-43A0A0A6YXN5 Gm43182-201ENSMUST00000199476 2528 ntBASIC16.16■□□□□ 0.18
Ighv1-43A0A0A6YXN5 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ighv1-43A0A0A6YXN5 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ighv1-43A0A0A6YXN5 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ighv1-43A0A0A6YXN5 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC16.16■□□□□ 0.18
Ighv1-43A0A0A6YXN5 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC16.16■□□□□ 0.18
Ighv1-43A0A0A6YXN5 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC16.16■□□□□ 0.18
Ighv1-43A0A0A6YXN5 Mir5130-201ENSMUST00000175160 84 ntBASIC16.16■□□□□ 0.18
Ighv1-43A0A0A6YXN5 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ighv1-43A0A0A6YXN5 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
Ighv1-43A0A0A6YXN5 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
Ighv1-43A0A0A6YXN5 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ighv1-43A0A0A6YXN5 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ighv1-43A0A0A6YXN5 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ighv1-43A0A0A6YXN5 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ighv1-43A0A0A6YXN5 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ighv1-43A0A0A6YXN5 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ighv1-43A0A0A6YXN5 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ighv1-43A0A0A6YXN5 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Ighv1-43A0A0A6YXN5 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Ighv1-43A0A0A6YXN5 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Ighv1-43A0A0A6YXN5 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ighv1-43A0A0A6YXN5 Mir8112-201ENSMUST00000184382 131 ntBASIC16.15■□□□□ 0.18
Ighv1-43A0A0A6YXN5 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC16.15■□□□□ 0.18
Ighv1-43A0A0A6YXN5 Il3ra-202ENSMUST00000223589 738 ntBASIC16.15■□□□□ 0.18
Ighv1-43A0A0A6YXN5 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ighv1-43A0A0A6YXN5 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ighv1-43A0A0A6YXN5 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC16.15■□□□□ 0.18
Ighv1-43A0A0A6YXN5 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC16.15■□□□□ 0.18
Ighv1-43A0A0A6YXN5 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ighv1-43A0A0A6YXN5 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ighv1-43A0A0A6YXN5 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
Ighv1-43A0A0A6YXN5 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Ighv1-43A0A0A6YXN5 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ighv1-43A0A0A6YXN5 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 19.5 ms