Protein–RNA interactions for Protein: A0A0A6YXG2

Ighv1-56, Immunoglobulin heavy variable 1-56 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-56A0A0A6YXG2 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ighv1-56A0A0A6YXG2 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC11.8□□□□□ -0.52
Ighv1-56A0A0A6YXG2 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ighv1-56A0A0A6YXG2 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ighv1-56A0A0A6YXG2 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ighv1-56A0A0A6YXG2 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC11.8□□□□□ -0.52
Ighv1-56A0A0A6YXG2 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC11.8□□□□□ -0.52
Ighv1-56A0A0A6YXG2 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC11.8□□□□□ -0.52
Ighv1-56A0A0A6YXG2 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC11.8□□□□□ -0.52
Ighv1-56A0A0A6YXG2 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ighv1-56A0A0A6YXG2 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ighv1-56A0A0A6YXG2 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ighv1-56A0A0A6YXG2 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ighv1-56A0A0A6YXG2 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ighv1-56A0A0A6YXG2 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ighv1-56A0A0A6YXG2 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ighv1-56A0A0A6YXG2 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Ighv1-56A0A0A6YXG2 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ighv1-56A0A0A6YXG2 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ighv1-56A0A0A6YXG2 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ighv1-56A0A0A6YXG2 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ighv1-56A0A0A6YXG2 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Ighv1-56A0A0A6YXG2 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Ighv1-56A0A0A6YXG2 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ighv1-56A0A0A6YXG2 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ighv1-56A0A0A6YXG2 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ighv1-56A0A0A6YXG2 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ighv1-56A0A0A6YXG2 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Ighv1-56A0A0A6YXG2 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Ighv1-56A0A0A6YXG2 Haglr-201ENSMUST00000100000 2085 ntBASIC11.79□□□□□ -0.52
Ighv1-56A0A0A6YXG2 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC11.79□□□□□ -0.52
Ighv1-56A0A0A6YXG2 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Ighv1-56A0A0A6YXG2 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC11.79□□□□□ -0.52
Ighv1-56A0A0A6YXG2 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Ighv1-56A0A0A6YXG2 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC11.79□□□□□ -0.52
Ighv1-56A0A0A6YXG2 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC11.79□□□□□ -0.52
Ighv1-56A0A0A6YXG2 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ighv1-56A0A0A6YXG2 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ighv1-56A0A0A6YXG2 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ighv1-56A0A0A6YXG2 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ighv1-56A0A0A6YXG2 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ighv1-56A0A0A6YXG2 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ighv1-56A0A0A6YXG2 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ighv1-56A0A0A6YXG2 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ighv1-56A0A0A6YXG2 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ighv1-56A0A0A6YXG2 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ighv1-56A0A0A6YXG2 Gm28265-201ENSMUST00000188201 2319 ntBASIC11.78□□□□□ -0.52
Ighv1-56A0A0A6YXG2 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ighv1-56A0A0A6YXG2 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ighv1-56A0A0A6YXG2 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ighv1-56A0A0A6YXG2 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ighv1-56A0A0A6YXG2 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ighv1-56A0A0A6YXG2 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC11.78□□□□□ -0.52
Ighv1-56A0A0A6YXG2 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ighv1-56A0A0A6YXG2 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC11.78□□□□□ -0.52
Ighv1-56A0A0A6YXG2 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ighv1-56A0A0A6YXG2 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC11.78□□□□□ -0.52
Ighv1-56A0A0A6YXG2 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC11.78□□□□□ -0.52
Ighv1-56A0A0A6YXG2 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC11.78□□□□□ -0.52
Ighv1-56A0A0A6YXG2 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ighv1-56A0A0A6YXG2 Gm42642-201ENSMUST00000200683 355 ntBASIC11.78□□□□□ -0.52
Ighv1-56A0A0A6YXG2 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC11.78□□□□□ -0.52
Ighv1-56A0A0A6YXG2 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC11.78□□□□□ -0.52
Ighv1-56A0A0A6YXG2 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ighv1-56A0A0A6YXG2 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ighv1-56A0A0A6YXG2 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ighv1-56A0A0A6YXG2 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ighv1-56A0A0A6YXG2 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Ighv1-56A0A0A6YXG2 Gm13509-201ENSMUST00000119733 1308 ntBASIC11.78□□□□□ -0.52
Ighv1-56A0A0A6YXG2 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC11.78□□□□□ -0.52
Ighv1-56A0A0A6YXG2 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ighv1-56A0A0A6YXG2 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ighv1-56A0A0A6YXG2 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC11.78□□□□□ -0.52
Ighv1-56A0A0A6YXG2 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Ighv1-56A0A0A6YXG2 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.52
Ighv1-56A0A0A6YXG2 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.52
Ighv1-56A0A0A6YXG2 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.52
Ighv1-56A0A0A6YXG2 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.52
Ighv1-56A0A0A6YXG2 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
Ighv1-56A0A0A6YXG2 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Ighv1-56A0A0A6YXG2 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Ighv1-56A0A0A6YXG2 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
Ighv1-56A0A0A6YXG2 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Ighv1-56A0A0A6YXG2 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Ighv1-56A0A0A6YXG2 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC11.77□□□□□ -0.53
Ighv1-56A0A0A6YXG2 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Ighv1-56A0A0A6YXG2 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC11.77□□□□□ -0.53
Ighv1-56A0A0A6YXG2 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC11.77□□□□□ -0.53
Ighv1-56A0A0A6YXG2 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC11.77□□□□□ -0.53
Ighv1-56A0A0A6YXG2 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC11.77□□□□□ -0.53
Ighv1-56A0A0A6YXG2 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Ighv1-56A0A0A6YXG2 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Ighv1-56A0A0A6YXG2 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Ighv1-56A0A0A6YXG2 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Ighv1-56A0A0A6YXG2 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
Ighv1-56A0A0A6YXG2 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Ighv1-56A0A0A6YXG2 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Ighv1-56A0A0A6YXG2 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Ighv1-56A0A0A6YXG2 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Ighv1-56A0A0A6YXG2 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 25.7 ms