Protein–RNA interactions for Protein: A0A075B654

Trav3-4, T cell receptor alpha variable 3-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-4A0A075B654 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav3-4A0A075B654 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav3-4A0A075B654 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav3-4A0A075B654 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav3-4A0A075B654 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav3-4A0A075B654 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav3-4A0A075B654 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC11.86□□□□□ -0.51
Trav3-4A0A075B654 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Trav3-4A0A075B654 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav3-4A0A075B654 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav3-4A0A075B654 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav3-4A0A075B654 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Trav3-4A0A075B654 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC11.86□□□□□ -0.51
Trav3-4A0A075B654 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Trav3-4A0A075B654 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Trav3-4A0A075B654 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC11.86□□□□□ -0.51
Trav3-4A0A075B654 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Trav3-4A0A075B654 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC11.86□□□□□ -0.51
Trav3-4A0A075B654 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav3-4A0A075B654 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC11.86□□□□□ -0.51
Trav3-4A0A075B654 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav3-4A0A075B654 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Trav3-4A0A075B654 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav3-4A0A075B654 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav3-4A0A075B654 Adgrb2-208ENSMUST00000121049 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav3-4A0A075B654 Eif4g1-203ENSMUST00000115457 5440 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
Trav3-4A0A075B654 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Trav3-4A0A075B654 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
Trav3-4A0A075B654 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav3-4A0A075B654 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC11.86□□□□□ -0.51
Trav3-4A0A075B654 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
Trav3-4A0A075B654 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav3-4A0A075B654 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC11.85□□□□□ -0.51
Trav3-4A0A075B654 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Trav3-4A0A075B654 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav3-4A0A075B654 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav3-4A0A075B654 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav3-4A0A075B654 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC11.85□□□□□ -0.51
Trav3-4A0A075B654 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC11.85□□□□□ -0.51
Trav3-4A0A075B654 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC11.85□□□□□ -0.51
Trav3-4A0A075B654 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC11.85□□□□□ -0.51
Trav3-4A0A075B654 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC11.85□□□□□ -0.51
Trav3-4A0A075B654 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav3-4A0A075B654 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC11.85□□□□□ -0.51
Trav3-4A0A075B654 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav3-4A0A075B654 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav3-4A0A075B654 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Trav3-4A0A075B654 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC11.85□□□□□ -0.51
Trav3-4A0A075B654 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav3-4A0A075B654 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC11.85□□□□□ -0.51
Trav3-4A0A075B654 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav3-4A0A075B654 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Trav3-4A0A075B654 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC11.85□□□□□ -0.51
Trav3-4A0A075B654 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Trav3-4A0A075B654 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav3-4A0A075B654 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav3-4A0A075B654 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav3-4A0A075B654 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav3-4A0A075B654 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav3-4A0A075B654 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav3-4A0A075B654 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC11.84□□□□□ -0.51
Trav3-4A0A075B654 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav3-4A0A075B654 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Trav3-4A0A075B654 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav3-4A0A075B654 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav3-4A0A075B654 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC11.84□□□□□ -0.51
Trav3-4A0A075B654 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav3-4A0A075B654 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC11.84□□□□□ -0.51
Trav3-4A0A075B654 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav3-4A0A075B654 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Trav3-4A0A075B654 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav3-4A0A075B654 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav3-4A0A075B654 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav3-4A0A075B654 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav3-4A0A075B654 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Trav3-4A0A075B654 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav3-4A0A075B654 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav3-4A0A075B654 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.51
Trav3-4A0A075B654 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.51
Trav3-4A0A075B654 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Trav3-4A0A075B654 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Trav3-4A0A075B654 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav3-4A0A075B654 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav3-4A0A075B654 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC11.83□□□□□ -0.52
Trav3-4A0A075B654 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav3-4A0A075B654 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC11.83□□□□□ -0.52
Trav3-4A0A075B654 Piezo1-209ENSMUST00000156333 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav3-4A0A075B654 Piezo1-201ENSMUST00000067252 8216 ntAPPRIS P2 TSL 5 BASIC11.83□□□□□ -0.52
Trav3-4A0A075B654 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav3-4A0A075B654 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Trav3-4A0A075B654 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC11.83□□□□□ -0.52
Trav3-4A0A075B654 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Trav3-4A0A075B654 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav3-4A0A075B654 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav3-4A0A075B654 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav3-4A0A075B654 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav3-4A0A075B654 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav3-4A0A075B654 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav3-4A0A075B654 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Trav3-4A0A075B654 Gm45605-201ENSMUST00000210265 4269 ntBASIC11.83□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 21 ms