Protein–RNA interactions for Protein: A0A075B653

Trav16, T cell receptor alpha variable 16 (Fragment), mousemouse

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav16A0A075B653 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav16A0A075B653 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC13.59□□□□□ -0.23
Trav16A0A075B653 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC13.59□□□□□ -0.23
Trav16A0A075B653 Gm40848-201ENSMUST00000221998 324 ntBASIC13.59□□□□□ -0.23
Trav16A0A075B653 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Trav16A0A075B653 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav16A0A075B653 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC13.59□□□□□ -0.23
Trav16A0A075B653 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
Trav16A0A075B653 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Trav16A0A075B653 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC13.59□□□□□ -0.23
Trav16A0A075B653 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav16A0A075B653 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC13.59□□□□□ -0.23
Trav16A0A075B653 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav16A0A075B653 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC13.59□□□□□ -0.23
Trav16A0A075B653 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav16A0A075B653 Gm43808-201ENSMUST00000202534 2065 ntBASIC13.59□□□□□ -0.23
Trav16A0A075B653 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.23
Trav16A0A075B653 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Trav16A0A075B653 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Trav16A0A075B653 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Trav16A0A075B653 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav16A0A075B653 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav16A0A075B653 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Trav16A0A075B653 Gm26833-201ENSMUST00000180899 440 ntBASIC13.58□□□□□ -0.24
Trav16A0A075B653 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
Trav16A0A075B653 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC13.58□□□□□ -0.24
Trav16A0A075B653 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav16A0A075B653 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
Trav16A0A075B653 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Trav16A0A075B653 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav16A0A075B653 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Trav16A0A075B653 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav16A0A075B653 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav16A0A075B653 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Trav16A0A075B653 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav16A0A075B653 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav16A0A075B653 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav16A0A075B653 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Trav16A0A075B653 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav16A0A075B653 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav16A0A075B653 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
Trav16A0A075B653 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav16A0A075B653 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav16A0A075B653 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav16A0A075B653 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Trav16A0A075B653 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
Trav16A0A075B653 AC160393.1-201ENSMUST00000218378 1279 ntBASIC13.57□□□□□ -0.24
Trav16A0A075B653 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
Trav16A0A075B653 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC13.57□□□□□ -0.24
Trav16A0A075B653 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
Trav16A0A075B653 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav16A0A075B653 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav16A0A075B653 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav16A0A075B653 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav16A0A075B653 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC13.57□□□□□ -0.24
Trav16A0A075B653 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav16A0A075B653 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Trav16A0A075B653 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Trav16A0A075B653 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav16A0A075B653 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav16A0A075B653 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Trav16A0A075B653 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Trav16A0A075B653 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav16A0A075B653 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
Trav16A0A075B653 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav16A0A075B653 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav16A0A075B653 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav16A0A075B653 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav16A0A075B653 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC13.56□□□□□ -0.24
Trav16A0A075B653 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav16A0A075B653 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav16A0A075B653 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC13.56□□□□□ -0.24
Trav16A0A075B653 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav16A0A075B653 Gm13241-201ENSMUST00000094493 780 ntBASIC13.56□□□□□ -0.24
Trav16A0A075B653 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav16A0A075B653 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav16A0A075B653 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav16A0A075B653 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC13.56□□□□□ -0.24
Trav16A0A075B653 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Trav16A0A075B653 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav16A0A075B653 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Trav16A0A075B653 Gm38345-201ENSMUST00000192635 1748 ntBASIC13.56□□□□□ -0.24
Trav16A0A075B653 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC13.55□□□□□ -0.24
Trav16A0A075B653 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
Trav16A0A075B653 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav16A0A075B653 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
Trav16A0A075B653 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Trav16A0A075B653 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC13.55□□□□□ -0.24
Trav16A0A075B653 CT010467.1-202ENSMUST00000205406 714 ntBASIC13.55□□□□□ -0.24
Trav16A0A075B653 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav16A0A075B653 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav16A0A075B653 Gm20628-201ENSMUST00000177363 3215 ntBASIC13.55□□□□□ -0.24
Trav16A0A075B653 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav16A0A075B653 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
Trav16A0A075B653 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC13.55□□□□□ -0.24
Trav16A0A075B653 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav16A0A075B653 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Trav16A0A075B653 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
Trav16A0A075B653 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav16A0A075B653 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 19.9 ms