Protein–RNA interactions for Protein: A0A075B641

Trav8-1, T cell receptor alpha variable 8-1 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8-1A0A075B641 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Trav8-1A0A075B641 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav8-1A0A075B641 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav8-1A0A075B641 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav8-1A0A075B641 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav8-1A0A075B641 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Trav8-1A0A075B641 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
Trav8-1A0A075B641 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav8-1A0A075B641 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Trav8-1A0A075B641 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav8-1A0A075B641 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav8-1A0A075B641 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Trav8-1A0A075B641 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC12.62□□□□□ -0.39
Trav8-1A0A075B641 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav8-1A0A075B641 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Trav8-1A0A075B641 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC12.62□□□□□ -0.39
Trav8-1A0A075B641 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
Trav8-1A0A075B641 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Trav8-1A0A075B641 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav8-1A0A075B641 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Trav8-1A0A075B641 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav8-1A0A075B641 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC12.62□□□□□ -0.39
Trav8-1A0A075B641 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav8-1A0A075B641 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Trav8-1A0A075B641 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Trav8-1A0A075B641 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC12.62□□□□□ -0.39
Trav8-1A0A075B641 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Trav8-1A0A075B641 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav8-1A0A075B641 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Trav8-1A0A075B641 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Trav8-1A0A075B641 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Trav8-1A0A075B641 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav8-1A0A075B641 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
Trav8-1A0A075B641 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav8-1A0A075B641 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Trav8-1A0A075B641 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav8-1A0A075B641 Gm37519-201ENSMUST00000191687 2210 ntBASIC12.61□□□□□ -0.39
Trav8-1A0A075B641 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC12.61□□□□□ -0.39
Trav8-1A0A075B641 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Trav8-1A0A075B641 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav8-1A0A075B641 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav8-1A0A075B641 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC12.61□□□□□ -0.39
Trav8-1A0A075B641 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Trav8-1A0A075B641 Gm22238-201ENSMUST00000175222 88 ntBASIC12.61□□□□□ -0.39
Trav8-1A0A075B641 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav8-1A0A075B641 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav8-1A0A075B641 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav8-1A0A075B641 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Trav8-1A0A075B641 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav8-1A0A075B641 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav8-1A0A075B641 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Trav8-1A0A075B641 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav8-1A0A075B641 Gm43808-201ENSMUST00000202534 2065 ntBASIC12.61□□□□□ -0.39
Trav8-1A0A075B641 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC12.61□□□□□ -0.39
Trav8-1A0A075B641 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav8-1A0A075B641 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav8-1A0A075B641 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Trav8-1A0A075B641 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Trav8-1A0A075B641 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav8-1A0A075B641 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav8-1A0A075B641 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav8-1A0A075B641 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Trav8-1A0A075B641 Adgrl1-210ENSMUST00000152978 5734 ntTSL 5 BASIC12.61□□□□□ -0.39
Trav8-1A0A075B641 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav8-1A0A075B641 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC12.61□□□□□ -0.39
Trav8-1A0A075B641 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav8-1A0A075B641 Gm44443-201ENSMUST00000204396 5633 ntBASIC12.6□□□□□ -0.39
Trav8-1A0A075B641 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav8-1A0A075B641 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC12.6□□□□□ -0.39
Trav8-1A0A075B641 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC12.6□□□□□ -0.39
Trav8-1A0A075B641 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav8-1A0A075B641 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav8-1A0A075B641 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav8-1A0A075B641 Haglr-201ENSMUST00000100000 2085 ntBASIC12.6□□□□□ -0.39
Trav8-1A0A075B641 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav8-1A0A075B641 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav8-1A0A075B641 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC12.6□□□□□ -0.39
Trav8-1A0A075B641 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC12.6□□□□□ -0.39
Trav8-1A0A075B641 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
Trav8-1A0A075B641 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Trav8-1A0A075B641 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC12.6□□□□□ -0.39
Trav8-1A0A075B641 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav8-1A0A075B641 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Trav8-1A0A075B641 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav8-1A0A075B641 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav8-1A0A075B641 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav8-1A0A075B641 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav8-1A0A075B641 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav8-1A0A075B641 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav8-1A0A075B641 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Trav8-1A0A075B641 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav8-1A0A075B641 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav8-1A0A075B641 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav8-1A0A075B641 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav8-1A0A075B641 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Trav8-1A0A075B641 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Trav8-1A0A075B641 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav8-1A0A075B641 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC12.59□□□□□ -0.39
Trav8-1A0A075B641 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav8-1A0A075B641 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 40.9 ms