Protein–RNA interactions for Protein: A0A075B639

Trav6-7-dv9, T cell receptor alpha variable 6-7-DV9 (Fragment), mousemouse

Predictions only

Length 125 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-7-dv9A0A075B639 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trav6-7-dv9A0A075B639 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Trav6-7-dv9A0A075B639 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trav6-7-dv9A0A075B639 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Trav6-7-dv9A0A075B639 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trav6-7-dv9A0A075B639 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
Trav6-7-dv9A0A075B639 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trav6-7-dv9A0A075B639 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Trav6-7-dv9A0A075B639 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Trav6-7-dv9A0A075B639 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
Trav6-7-dv9A0A075B639 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC15.56■□□□□ 0.08
Trav6-7-dv9A0A075B639 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trav6-7-dv9A0A075B639 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trav6-7-dv9A0A075B639 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trav6-7-dv9A0A075B639 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trav6-7-dv9A0A075B639 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
Trav6-7-dv9A0A075B639 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trav6-7-dv9A0A075B639 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trav6-7-dv9A0A075B639 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trav6-7-dv9A0A075B639 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trav6-7-dv9A0A075B639 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
Trav6-7-dv9A0A075B639 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trav6-7-dv9A0A075B639 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trav6-7-dv9A0A075B639 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trav6-7-dv9A0A075B639 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC15.55■□□□□ 0.08
Trav6-7-dv9A0A075B639 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trav6-7-dv9A0A075B639 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trav6-7-dv9A0A075B639 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC15.55■□□□□ 0.08
Trav6-7-dv9A0A075B639 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trav6-7-dv9A0A075B639 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trav6-7-dv9A0A075B639 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC15.55■□□□□ 0.08
Trav6-7-dv9A0A075B639 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC15.55■□□□□ 0.08
Trav6-7-dv9A0A075B639 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC15.55■□□□□ 0.08
Trav6-7-dv9A0A075B639 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC15.55■□□□□ 0.08
Trav6-7-dv9A0A075B639 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Trav6-7-dv9A0A075B639 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC15.55■□□□□ 0.08
Trav6-7-dv9A0A075B639 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC15.55■□□□□ 0.08
Trav6-7-dv9A0A075B639 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trav6-7-dv9A0A075B639 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trav6-7-dv9A0A075B639 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
Trav6-7-dv9A0A075B639 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trav6-7-dv9A0A075B639 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trav6-7-dv9A0A075B639 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trav6-7-dv9A0A075B639 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC15.55■□□□□ 0.08
Trav6-7-dv9A0A075B639 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC15.54■□□□□ 0.08
Trav6-7-dv9A0A075B639 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trav6-7-dv9A0A075B639 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trav6-7-dv9A0A075B639 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC15.54■□□□□ 0.08
Trav6-7-dv9A0A075B639 Gm43272-201ENSMUST00000200599 1584 ntBASIC15.54■□□□□ 0.08
Trav6-7-dv9A0A075B639 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trav6-7-dv9A0A075B639 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trav6-7-dv9A0A075B639 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trav6-7-dv9A0A075B639 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trav6-7-dv9A0A075B639 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trav6-7-dv9A0A075B639 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trav6-7-dv9A0A075B639 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
Trav6-7-dv9A0A075B639 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC15.54■□□□□ 0.08
Trav6-7-dv9A0A075B639 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
Trav6-7-dv9A0A075B639 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
Trav6-7-dv9A0A075B639 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Trav6-7-dv9A0A075B639 Gm15375-201ENSMUST00000119510 849 ntBASIC15.54■□□□□ 0.08
Trav6-7-dv9A0A075B639 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Trav6-7-dv9A0A075B639 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Trav6-7-dv9A0A075B639 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trav6-7-dv9A0A075B639 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC15.54■□□□□ 0.08
Trav6-7-dv9A0A075B639 Gm43808-201ENSMUST00000202534 2065 ntBASIC15.54■□□□□ 0.08
Trav6-7-dv9A0A075B639 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trav6-7-dv9A0A075B639 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trav6-7-dv9A0A075B639 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trav6-7-dv9A0A075B639 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trav6-7-dv9A0A075B639 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trav6-7-dv9A0A075B639 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trav6-7-dv9A0A075B639 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trav6-7-dv9A0A075B639 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trav6-7-dv9A0A075B639 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trav6-7-dv9A0A075B639 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
Trav6-7-dv9A0A075B639 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trav6-7-dv9A0A075B639 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC15.53■□□□□ 0.08
Trav6-7-dv9A0A075B639 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Trav6-7-dv9A0A075B639 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trav6-7-dv9A0A075B639 Gm12896-201ENSMUST00000118430 226 ntBASIC15.53■□□□□ 0.08
Trav6-7-dv9A0A075B639 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
Trav6-7-dv9A0A075B639 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Trav6-7-dv9A0A075B639 Mtag2-201ENSMUST00000058665 714 ntBASIC15.53■□□□□ 0.08
Trav6-7-dv9A0A075B639 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
Trav6-7-dv9A0A075B639 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trav6-7-dv9A0A075B639 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Trav6-7-dv9A0A075B639 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
Trav6-7-dv9A0A075B639 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trav6-7-dv9A0A075B639 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Trav6-7-dv9A0A075B639 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC15.53■□□□□ 0.08
Trav6-7-dv9A0A075B639 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC15.52■□□□□ 0.08
Trav6-7-dv9A0A075B639 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trav6-7-dv9A0A075B639 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trav6-7-dv9A0A075B639 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trav6-7-dv9A0A075B639 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
Trav6-7-dv9A0A075B639 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Trav6-7-dv9A0A075B639 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trav6-7-dv9A0A075B639 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC15.52■□□□□ 0.08
Trav6-7-dv9A0A075B639 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 20.9 ms