Protein–RNA interactions for Protein: Q9ESN2

Trim39, E3 ubiquitin-protein ligase TRIM39, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39Q9ESN2 Cbll1-203ENSMUST00000101499 3900 ntAPPRIS P2 TSL 1 (best) BASIC5.83□□□□□ -1.48
Trim39Q9ESN2 1700097M23Rik-201ENSMUST00000204079 1522 ntBASIC5.83□□□□□ -1.48
Trim39Q9ESN2 Mdn1-211ENSMUST00000178134 17959 ntAPPRIS P2 TSL 5 BASIC5.83□□□□□ -1.48
Trim39Q9ESN2 1700030N03Rik-203ENSMUST00000190575 3146 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
Trim39Q9ESN2 Olfr542-ps1-202ENSMUST00000218525 4039 ntTSL 5 BASIC5.83□□□□□ -1.48
Trim39Q9ESN2 Gm12018-201ENSMUST00000150694 3375 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
Trim39Q9ESN2 Olfr118-202ENSMUST00000215811 1742 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
Trim39Q9ESN2 CT009504.2-201ENSMUST00000217951 2960 ntTSL 5 BASIC5.82□□□□□ -1.48
Trim39Q9ESN2 Cwf19l1-201ENSMUST00000026218 3574 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
Trim39Q9ESN2 Mfap1a-201ENSMUST00000089926 4198 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
Trim39Q9ESN2 Ifi44-201ENSMUST00000029671 2910 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
Trim39Q9ESN2 Zfp37-202ENSMUST00000129511 1691 ntTSL 5 BASIC5.82□□□□□ -1.48
Trim39Q9ESN2 Gm37677-201ENSMUST00000194520 7634 ntBASIC5.82□□□□□ -1.48
Trim39Q9ESN2 Olfr127-202ENSMUST00000217223 3733 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
Trim39Q9ESN2 Olfr1056-202ENSMUST00000216547 2213 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
Trim39Q9ESN2 Olfr1111-203ENSMUST00000216378 1636 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
Trim39Q9ESN2 BC046251-201ENSMUST00000154632 3653 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
Trim39Q9ESN2 Scn1a-203ENSMUST00000112366 8386 ntAPPRIS ALT1 TSL 5 BASIC5.82□□□□□ -1.48
Trim39Q9ESN2 Mef2c-202ENSMUST00000163888 6277 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
Trim39Q9ESN2 Olfr1242-203ENSMUST00000143935 2406 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
Trim39Q9ESN2 Rabgap1-201ENSMUST00000061179 4967 ntAPPRIS P4 TSL 1 (best) BASIC5.82□□□□□ -1.48
Trim39Q9ESN2 Igkv9-120-201ENSMUST00000103316 353 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
Trim39Q9ESN2 Igkv6-14-201ENSMUST00000103394 347 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
Trim39Q9ESN2 Gm26422-201ENSMUST00000104276 132 ntBASIC5.82□□□□□ -1.48
Trim39Q9ESN2 Gm22021-201ENSMUST00000104353 107 ntBASIC5.82□□□□□ -1.48
Trim39Q9ESN2 Gm11409-201ENSMUST00000118621 403 ntBASIC5.82□□□□□ -1.48
Trim39Q9ESN2 Gm11805-201ENSMUST00000121238 600 ntBASIC5.82□□□□□ -1.48
Trim39Q9ESN2 Gm13009-201ENSMUST00000121307 267 ntBASIC5.82□□□□□ -1.48
Trim39Q9ESN2 Gm14761-201ENSMUST00000121363 262 ntBASIC5.82□□□□□ -1.48
Trim39Q9ESN2 1700025O08Rik-201ENSMUST00000123729 456 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
Trim39Q9ESN2 Gm3669-202ENSMUST00000127852 397 ntTSL 3 BASIC5.82□□□□□ -1.48
Trim39Q9ESN2 Gm2101-201ENSMUST00000128191 397 ntTSL 3 BASIC5.82□□□□□ -1.48
Trim39Q9ESN2 Gm14978-201ENSMUST00000129000 304 ntTSL 3 BASIC5.82□□□□□ -1.48
Trim39Q9ESN2 Gm12119-201ENSMUST00000136083 700 ntTSL 3 BASIC5.82□□□□□ -1.48
Trim39Q9ESN2 Gm11963-201ENSMUST00000149826 500 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
Trim39Q9ESN2 Gm2165-205ENSMUST00000155337 397 ntTSL 3 BASIC5.82□□□□□ -1.48
Trim39Q9ESN2 Gm3470-201ENSMUST00000160819 420 ntBASIC5.82□□□□□ -1.48
Trim39Q9ESN2 Gm3140-201ENSMUST00000163523 481 ntBASIC5.82□□□□□ -1.48
Trim39Q9ESN2 Gm20454-201ENSMUST00000172713 221 ntBASIC5.82□□□□□ -1.48
Trim39Q9ESN2 Gm5871-201ENSMUST00000176461 718 ntBASIC5.82□□□□□ -1.48
Trim39Q9ESN2 Gm25671-201ENSMUST00000178612 105 ntBASIC5.82□□□□□ -1.48
Trim39Q9ESN2 Gm23307-201ENSMUST00000179167 105 ntBASIC5.82□□□□□ -1.48
Trim39Q9ESN2 Gm25286-201ENSMUST00000179790 105 ntBASIC5.82□□□□□ -1.48
Trim39Q9ESN2 Rian-203ENSMUST00000181527 989 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
Trim39Q9ESN2 Gm10105-201ENSMUST00000184601 270 ntBASIC5.82□□□□□ -1.48
Trim39Q9ESN2 2310043O21Rik-201ENSMUST00000185323 622 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
Trim39Q9ESN2 Rpl23a-ps10-201ENSMUST00000185511 462 ntBASIC5.82□□□□□ -1.48
Trim39Q9ESN2 Krtdap-203ENSMUST00000187493 420 ntTSL 2 BASIC5.82□□□□□ -1.48
Trim39Q9ESN2 Krtdap-205ENSMUST00000189673 345 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
Trim39Q9ESN2 Gm30043-201ENSMUST00000196689 733 ntTSL 2 BASIC5.82□□□□□ -1.48
Trim39Q9ESN2 Gm43144-201ENSMUST00000198256 485 ntBASIC5.82□□□□□ -1.48
Trim39Q9ESN2 Gm8953-201ENSMUST00000198497 904 ntTSL 5 BASIC5.82□□□□□ -1.48
Trim39Q9ESN2 Gm19252-201ENSMUST00000204705 305 ntBASIC5.82□□□□□ -1.48
Trim39Q9ESN2 Gm45196-201ENSMUST00000206751 825 ntBASIC5.82□□□□□ -1.48
Trim39Q9ESN2 Gm7780-201ENSMUST00000214787 406 ntBASIC5.82□□□□□ -1.48
Trim39Q9ESN2 Gm31849-201ENSMUST00000220306 375 ntBASIC5.82□□□□□ -1.48
Trim39Q9ESN2 Gm40932-202ENSMUST00000221315 511 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
Trim39Q9ESN2 Gm5928-201ENSMUST00000221839 466 ntBASIC5.82□□□□□ -1.48
Trim39Q9ESN2 AC170086.2-201ENSMUST00000224733 803 ntBASIC5.82□□□□□ -1.48
Trim39Q9ESN2 2900092C05Rik-201ENSMUST00000032541 887 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
Trim39Q9ESN2 Cryba1-201ENSMUST00000078623 778 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
Trim39Q9ESN2 Olfr746-201ENSMUST00000080616 945 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
Trim39Q9ESN2 Tas2r110-201ENSMUST00000082014 1002 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
Trim39Q9ESN2 Olfr203-201ENSMUST00000089305 924 ntBASIC5.82□□□□□ -1.48
Trim39Q9ESN2 1700008P02Rik-201ENSMUST00000091364 783 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
Trim39Q9ESN2 Krtap14-201ENSMUST00000099562 216 ntTSL 5 BASIC5.82□□□□□ -1.48
Trim39Q9ESN2 Fat1-203ENSMUST00000189017 14651 ntTSL 5 BASIC5.82□□□□□ -1.48
Trim39Q9ESN2 Pkn2-210ENSMUST00000174422 2904 ntTSL 5 BASIC5.82□□□□□ -1.48
Trim39Q9ESN2 Ccl28-201ENSMUST00000099241 3740 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
Trim39Q9ESN2 AC137871.4-201ENSMUST00000226323 3901 ntBASIC5.82□□□□□ -1.48
Trim39Q9ESN2 Lrrtm4-203ENSMUST00000126399 3050 ntAPPRIS ALT1 TSL 5 BASIC5.82□□□□□ -1.48
Trim39Q9ESN2 Glb1l3-203ENSMUST00000210274 2532 ntAPPRIS P2 TSL 1 (best) BASIC5.82□□□□□ -1.48
Trim39Q9ESN2 Dock11-202ENSMUST00000115264 1725 ntTSL 5 BASIC5.82□□□□□ -1.48
Trim39Q9ESN2 AC154612.1-202ENSMUST00000224806 1725 ntBASIC5.82□□□□□ -1.48
Trim39Q9ESN2 Gm26538-201ENSMUST00000180512 3498 ntTSL 5 BASIC5.82□□□□□ -1.48
Trim39Q9ESN2 Gm20287-201ENSMUST00000172848 2367 ntBASIC5.81□□□□□ -1.48
Trim39Q9ESN2 Gm43164-201ENSMUST00000202529 2128 ntBASIC5.81□□□□□ -1.48
Trim39Q9ESN2 Olfr193-203ENSMUST00000208455 2855 ntAPPRIS P1 TSL 3 BASIC5.81□□□□□ -1.48
Trim39Q9ESN2 Vmn1r184-206ENSMUST00000228145 5888 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
Trim39Q9ESN2 Bivm-201ENSMUST00000035991 3313 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
Trim39Q9ESN2 4933434E20Rik-201ENSMUST00000029551 3097 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Trim39Q9ESN2 Olfr771-202ENSMUST00000214271 2098 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
Trim39Q9ESN2 Clec4e-201ENSMUST00000032239 2518 ntAPPRIS P2 TSL 1 (best) BASIC5.81□□□□□ -1.48
Trim39Q9ESN2 Abi3bp-201ENSMUST00000048471 4687 ntAPPRIS P4 TSL 1 (best) BASIC5.81□□□□□ -1.48
Trim39Q9ESN2 Olfr1487-204ENSMUST00000216688 2038 ntTSL 5 BASIC5.81□□□□□ -1.48
Trim39Q9ESN2 Olfr1392-206ENSMUST00000215861 3670 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
Trim39Q9ESN2 Neb-201ENSMUST00000028320 10298 ntTSL 5 BASIC5.81□□□□□ -1.48
Trim39Q9ESN2 Gm18879-201ENSMUST00000221187 1537 ntBASIC5.81□□□□□ -1.48
Trim39Q9ESN2 Gria2-201ENSMUST00000075316 10371 ntAPPRIS P3 TSL 1 (best) BASIC5.81□□□□□ -1.48
Trim39Q9ESN2 Trbv5-201ENSMUST00000103266 368 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
Trim39Q9ESN2 Gm23979-201ENSMUST00000104071 128 ntBASIC5.81□□□□□ -1.48
Trim39Q9ESN2 Rnu11-201ENSMUST00000104135 134 ntBASIC5.81□□□□□ -1.48
Trim39Q9ESN2 Scgb1b22-ps-201ENSMUST00000116008 280 ntBASIC5.81□□□□□ -1.48
Trim39Q9ESN2 Gm15750-201ENSMUST00000120970 616 ntBASIC5.81□□□□□ -1.48
Trim39Q9ESN2 Gm25325-201ENSMUST00000122559 86 ntBASIC5.81□□□□□ -1.48
Trim39Q9ESN2 Zfp950-205ENSMUST00000148569 192 ntTSL 5 BASIC5.81□□□□□ -1.48
Trim39Q9ESN2 Gm22136-201ENSMUST00000158751 268 ntBASIC5.81□□□□□ -1.48
Trim39Q9ESN2 Gm9006-201ENSMUST00000165520 841 ntBASIC5.81□□□□□ -1.48
Trim39Q9ESN2 Gm17201-201ENSMUST00000167226 390 ntTSL 5 BASIC5.81□□□□□ -1.48
Trim39Q9ESN2 Gm25244-201ENSMUST00000178089 132 ntBASIC5.81□□□□□ -1.48
Retrieved 100 of 76,532 protein–RNA pairs in 100.6 ms