Protein–RNA interactions for Protein: Q8CCB4

Vps53, Vacuolar protein sorting-associated protein 53 homolog, mousemouse

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps53Q8CCB4 CT009754.2-201ENSMUST00000221683 3661 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
Vps53Q8CCB4 Ralgapa1-211ENSMUST00000220367 7473 ntAPPRIS ALT2 TSL 5 BASIC5.72□□□□□ -1.49
Vps53Q8CCB4 Gm11674-201ENSMUST00000124855 3005 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
Vps53Q8CCB4 Gm11867-201ENSMUST00000133363 1909 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
Vps53Q8CCB4 Fam169a-202ENSMUST00000169863 6013 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Vps53Q8CCB4 Lrrn3-201ENSMUST00000043884 3865 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Vps53Q8CCB4 Cacnb4-202ENSMUST00000102760 7872 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Vps53Q8CCB4 Mtm1-213ENSMUST00000171933 3488 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Vps53Q8CCB4 H2al1n-201ENSMUST00000105137 514 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
Vps53Q8CCB4 4933413L06Rik-201ENSMUST00000110292 809 ntTSL 2 BASIC5.72□□□□□ -1.49
Vps53Q8CCB4 Eif3s6-ps1-201ENSMUST00000117907 470 ntBASIC5.72□□□□□ -1.49
Vps53Q8CCB4 Defa-ps1-201ENSMUST00000119062 282 ntBASIC5.72□□□□□ -1.49
Vps53Q8CCB4 Mup-ps18-201ENSMUST00000120145 531 ntBASIC5.72□□□□□ -1.49
Vps53Q8CCB4 Sult2a-ps1-201ENSMUST00000120317 341 ntBASIC5.72□□□□□ -1.49
Vps53Q8CCB4 Defa-ps6-201ENSMUST00000122172 282 ntBASIC5.72□□□□□ -1.49
Vps53Q8CCB4 Olfr1003-ps1-201ENSMUST00000122238 717 ntBASIC5.72□□□□□ -1.49
Vps53Q8CCB4 Gm12854-201ENSMUST00000128518 297 ntBASIC5.72□□□□□ -1.49
Vps53Q8CCB4 Tslrn1-201ENSMUST00000129479 747 ntTSL 3 BASIC5.72□□□□□ -1.49
Vps53Q8CCB4 8030443G20Rik-201ENSMUST00000140919 903 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
Vps53Q8CCB4 Gm12195-201ENSMUST00000144990 469 ntTSL 3 BASIC5.72□□□□□ -1.49
Vps53Q8CCB4 Gm25278-201ENSMUST00000157267 120 ntBASIC5.72□□□□□ -1.49
Vps53Q8CCB4 Gm24962-201ENSMUST00000157917 109 ntBASIC5.72□□□□□ -1.49
Vps53Q8CCB4 Gm23318-201ENSMUST00000158000 108 ntBASIC5.72□□□□□ -1.49
Vps53Q8CCB4 Gm25605-201ENSMUST00000158364 124 ntBASIC5.72□□□□□ -1.49
Vps53Q8CCB4 Ear-ps9-201ENSMUST00000161963 460 ntBASIC5.72□□□□□ -1.49
Vps53Q8CCB4 Gm17669-201ENSMUST00000163749 465 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
Vps53Q8CCB4 1700071M16Rik-201ENSMUST00000164150 537 ntTSL 3 BASIC5.72□□□□□ -1.49
Vps53Q8CCB4 Vmn1r170-201ENSMUST00000170166 915 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
Vps53Q8CCB4 Gm17430-201ENSMUST00000171339 474 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
Vps53Q8CCB4 Trav14n-1-201ENSMUST00000177578 340 ntAPPRIS ALT2 BASIC5.72□□□□□ -1.49
Vps53Q8CCB4 Gm3453-202ENSMUST00000178308 618 ntAPPRIS ALT2 TSL 5 BASIC5.72□□□□□ -1.49
Vps53Q8CCB4 Gm3127-203ENSMUST00000178386 618 ntAPPRIS ALT2 TSL 5 BASIC5.72□□□□□ -1.49
Vps53Q8CCB4 Zfp950-206ENSMUST00000178819 171 ntBASIC5.72□□□□□ -1.49
Vps53Q8CCB4 Gm3685-202ENSMUST00000179199 618 ntAPPRIS ALT2 TSL 5 BASIC5.72□□□□□ -1.49
Vps53Q8CCB4 Trav14d-1-202ENSMUST00000187138 340 ntAPPRIS ALT2 BASIC5.72□□□□□ -1.49
Vps53Q8CCB4 1700031M16Rik-207ENSMUST00000191513 847 ntAPPRIS ALT2 TSL 1 (best) BASIC5.72□□□□□ -1.49
Vps53Q8CCB4 Gm2623-201ENSMUST00000199229 286 ntBASIC5.72□□□□□ -1.49
Vps53Q8CCB4 Gm42579-201ENSMUST00000200512 734 ntBASIC5.72□□□□□ -1.49
Vps53Q8CCB4 Gm43550-201ENSMUST00000200597 303 ntBASIC5.72□□□□□ -1.49
Vps53Q8CCB4 Gm6261-201ENSMUST00000204707 760 ntBASIC5.72□□□□□ -1.49
Vps53Q8CCB4 Gm44773-201ENSMUST00000207374 557 ntBASIC5.72□□□□□ -1.49
Vps53Q8CCB4 Gm44693-201ENSMUST00000208141 460 ntTSL 3 BASIC5.72□□□□□ -1.49
Vps53Q8CCB4 Gm44515-201ENSMUST00000209045 379 ntTSL 5 BASIC5.72□□□□□ -1.49
Vps53Q8CCB4 Gm19709-201ENSMUST00000215403 482 ntBASIC5.72□□□□□ -1.49
Vps53Q8CCB4 Gm4057-201ENSMUST00000221407 368 ntBASIC5.72□□□□□ -1.49
Vps53Q8CCB4 Gm26571-203ENSMUST00000221865 555 ntTSL 2 BASIC5.72□□□□□ -1.49
Vps53Q8CCB4 Gm9512-201ENSMUST00000223112 497 ntBASIC5.72□□□□□ -1.49
Vps53Q8CCB4 Olfr1489-201ENSMUST00000053113 1111 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
Vps53Q8CCB4 Olfr211-201ENSMUST00000065786 930 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
Vps53Q8CCB4 Gm7665-201ENSMUST00000076710 297 ntBASIC5.72□□□□□ -1.49
Vps53Q8CCB4 Olfr206-201ENSMUST00000084791 1005 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
Vps53Q8CCB4 Olfr833-ps1-201ENSMUST00000086493 913 ntBASIC5.72□□□□□ -1.49
Vps53Q8CCB4 Olfr259-201ENSMUST00000099862 939 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
Vps53Q8CCB4 Olfr887-202ENSMUST00000212502 6281 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
Vps53Q8CCB4 2700016F22Rik-201ENSMUST00000181556 3605 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
Vps53Q8CCB4 4933403O08Rik-203ENSMUST00000164272 1517 ntAPPRIS P2 TSL 1 (best) BASIC5.72□□□□□ -1.49
Vps53Q8CCB4 Gm16513-201ENSMUST00000101023 2832 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Vps53Q8CCB4 Olfr1317-204ENSMUST00000216988 2488 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
Vps53Q8CCB4 Gm18594-201ENSMUST00000175733 1403 ntBASIC5.72□□□□□ -1.49
Vps53Q8CCB4 1700129L04Rik-202ENSMUST00000189291 1401 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
Vps53Q8CCB4 Olfr1303-202ENSMUST00000216114 2976 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
Vps53Q8CCB4 Olfr1085-203ENSMUST00000214566 5129 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
Vps53Q8CCB4 AC160931.3-201ENSMUST00000222111 2267 ntBASIC5.72□□□□□ -1.49
Vps53Q8CCB4 Plcz1-201ENSMUST00000032356 2271 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Vps53Q8CCB4 Ndst4-205ENSMUST00000174648 4996 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
Vps53Q8CCB4 Gm19176-201ENSMUST00000222149 1831 ntBASIC5.71□□□□□ -1.49
Vps53Q8CCB4 Olfr1195-202ENSMUST00000213545 2585 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.49
Vps53Q8CCB4 Slco1a5-201ENSMUST00000081380 2572 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
Vps53Q8CCB4 AC154681.1-201ENSMUST00000225876 1735 ntBASIC5.71□□□□□ -1.49
Vps53Q8CCB4 Clec5a-202ENSMUST00000101491 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.49
Vps53Q8CCB4 Zfp65-201ENSMUST00000073157 3957 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
Vps53Q8CCB4 Gm44250-201ENSMUST00000203092 4229 ntBASIC5.71□□□□□ -1.49
Vps53Q8CCB4 Clk4-203ENSMUST00000109113 1627 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
Vps53Q8CCB4 AC122357.1-201ENSMUST00000221652 1515 ntBASIC5.71□□□□□ -1.5
Vps53Q8CCB4 Postn-202ENSMUST00000081564 2670 ntAPPRIS ALT2 TSL 5 BASIC5.71□□□□□ -1.5
Vps53Q8CCB4 Mir680-3-201ENSMUST00000102298 87 ntBASIC5.71□□□□□ -1.5
Vps53Q8CCB4 Igkc-201ENSMUST00000103410 532 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
Vps53Q8CCB4 Gm17146-201ENSMUST00000108464 372 ntTSL 3 BASIC5.71□□□□□ -1.5
Vps53Q8CCB4 Fbxo48-202ENSMUST00000109635 1098 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
Vps53Q8CCB4 Gm8145-201ENSMUST00000118220 745 ntBASIC5.71□□□□□ -1.5
Vps53Q8CCB4 Gm12717-201ENSMUST00000118427 983 ntBASIC5.71□□□□□ -1.5
Vps53Q8CCB4 Gm12889-201ENSMUST00000118684 241 ntBASIC5.71□□□□□ -1.5
Vps53Q8CCB4 Gimap4-204ENSMUST00000119575 900 ntTSL 3 BASIC5.71□□□□□ -1.5
Vps53Q8CCB4 Gm12881-201ENSMUST00000121191 203 ntBASIC5.71□□□□□ -1.5
Vps53Q8CCB4 Defa-ps14-201ENSMUST00000121373 418 ntBASIC5.71□□□□□ -1.5
Vps53Q8CCB4 Gm23111-201ENSMUST00000122652 105 ntBASIC5.71□□□□□ -1.5
Vps53Q8CCB4 Gm24371-201ENSMUST00000122662 267 ntBASIC5.71□□□□□ -1.5
Vps53Q8CCB4 Gm16365-204ENSMUST00000143877 779 ntTSL 2 BASIC5.71□□□□□ -1.5
Vps53Q8CCB4 Gm3362-201ENSMUST00000148102 466 ntBASIC5.71□□□□□ -1.5
Vps53Q8CCB4 Gm24188-201ENSMUST00000157980 108 ntBASIC5.71□□□□□ -1.5
Vps53Q8CCB4 4930598F16Rik-201ENSMUST00000187352 761 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
Vps53Q8CCB4 Mrgprb13-201ENSMUST00000188191 985 ntBASIC5.71□□□□□ -1.5
Vps53Q8CCB4 C4bp-ps1-201ENSMUST00000189393 706 ntBASIC5.71□□□□□ -1.5
Vps53Q8CCB4 4930520M14Rik-201ENSMUST00000196947 701 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
Vps53Q8CCB4 Gm9245-201ENSMUST00000200528 983 ntBASIC5.71□□□□□ -1.5
Vps53Q8CCB4 Gm44181-201ENSMUST00000203106 483 ntBASIC5.71□□□□□ -1.5
Vps53Q8CCB4 Gm44138-201ENSMUST00000204939 271 ntBASIC5.71□□□□□ -1.5
Vps53Q8CCB4 AC161456.1-201ENSMUST00000206771 887 ntBASIC5.71□□□□□ -1.5
Vps53Q8CCB4 Olfr494-201ENSMUST00000209743 1002 ntAPPRIS P1 TSL 3 BASIC5.71□□□□□ -1.5
Vps53Q8CCB4 Gm8264-201ENSMUST00000217801 465 ntBASIC5.71□□□□□ -1.5
Retrieved 100 of 76,532 protein–RNA pairs in 67.7 ms