Protein–RNA interactions for Protein: Q05722

Col9a1, Collagen alpha-1(IX) chain, mousemouse

Predictions only

Length 921 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a1Q05722 Rfc1-201ENSMUST00000172732 4699 ntAPPRIS ALT2 TSL 1 (best) BASIC6.69□□□□□ -1.34
Col9a1Q05722 1500004A13Rik-206ENSMUST00000184170 576 ntTSL 3 BASIC6.69□□□□□ -1.34
Col9a1Q05722 Gm28921-201ENSMUST00000190219 378 ntBASIC6.69□□□□□ -1.34
Col9a1Q05722 Gm19193-201ENSMUST00000190263 590 ntBASIC6.69□□□□□ -1.34
Col9a1Q05722 Gm37295-201ENSMUST00000192186 109 ntBASIC6.69□□□□□ -1.34
Col9a1Q05722 Gm38150-201ENSMUST00000192996 452 ntBASIC6.69□□□□□ -1.34
Col9a1Q05722 Gm42500-201ENSMUST00000199898 517 ntTSL 3 BASIC6.69□□□□□ -1.34
Col9a1Q05722 Gm44977-201ENSMUST00000205283 420 ntBASIC6.69□□□□□ -1.34
Col9a1Q05722 Gm18016-201ENSMUST00000216119 801 ntBASIC6.69□□□□□ -1.34
Col9a1Q05722 Olfr1456-ps1-201ENSMUST00000087769 518 ntBASIC6.69□□□□□ -1.34
Col9a1Q05722 Mir496a-201ENSMUST00000093627 79 ntBASIC6.69□□□□□ -1.34
Col9a1Q05722 Defa31-201ENSMUST00000098896 377 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
Col9a1Q05722 Gm15169-201ENSMUST00000126095 2753 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
Col9a1Q05722 Gm33680-202ENSMUST00000219411 3401 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
Col9a1Q05722 Gm10637-202ENSMUST00000184702 3233 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
Col9a1Q05722 Gm43496-201ENSMUST00000201682 3001 ntBASIC6.69□□□□□ -1.34
Col9a1Q05722 Gm43618-201ENSMUST00000197392 3451 ntBASIC6.69□□□□□ -1.34
Col9a1Q05722 Gm29660-201ENSMUST00000185631 2166 ntTSL 5 BASIC6.69□□□□□ -1.34
Col9a1Q05722 Gm29309-201ENSMUST00000186251 2166 ntTSL 5 BASIC6.69□□□□□ -1.34
Col9a1Q05722 Gm29632-201ENSMUST00000190335 2166 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
Col9a1Q05722 Gm28538-201ENSMUST00000190919 2166 ntTSL 5 BASIC6.69□□□□□ -1.34
Col9a1Q05722 Cbll1-203ENSMUST00000101499 3900 ntAPPRIS P2 TSL 1 (best) BASIC6.69□□□□□ -1.34
Col9a1Q05722 Gm37916-201ENSMUST00000192153 2435 ntBASIC6.69□□□□□ -1.34
Col9a1Q05722 Olfr1384-202ENSMUST00000213776 4437 ntAPPRIS P1 TSL 5 BASIC6.69□□□□□ -1.34
Col9a1Q05722 Olfr741-203ENSMUST00000213903 3305 ntAPPRIS P1 TSL 5 BASIC6.69□□□□□ -1.34
Col9a1Q05722 Zmynd8-202ENSMUST00000088113 3757 ntAPPRIS ALT2 TSL 5 BASIC6.69□□□□□ -1.34
Col9a1Q05722 AC163731.1-201ENSMUST00000225696 3118 ntBASIC6.69□□□□□ -1.34
Col9a1Q05722 Ablim1-201ENSMUST00000079360 7152 ntAPPRIS P3 TSL 5 BASIC6.69□□□□□ -1.34
Col9a1Q05722 Afm-201ENSMUST00000113179 2038 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
Col9a1Q05722 Mccc1os-201ENSMUST00000124469 3353 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
Col9a1Q05722 Rab8b-201ENSMUST00000041139 4733 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
Col9a1Q05722 Ocln-202ENSMUST00000069756 4052 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
Col9a1Q05722 AC158605.3-201ENSMUST00000218999 2538 ntBASIC6.69□□□□□ -1.34
Col9a1Q05722 Cyp4a31-202ENSMUST00000030486 2509 ntAPPRIS P1 TSL 5 BASIC6.69□□□□□ -1.34
Col9a1Q05722 Fryl-202ENSMUST00000101127 11340 ntAPPRIS P1 TSL 5 BASIC6.69□□□□□ -1.34
Col9a1Q05722 Usp54-202ENSMUST00000035340 6495 ntAPPRIS P1 TSL 5 BASIC6.69□□□□□ -1.34
Col9a1Q05722 Rp1-203ENSMUST00000208660 4170 ntAPPRIS P1 TSL 5 BASIC6.68□□□□□ -1.34
Col9a1Q05722 Arhgef6-202ENSMUST00000114735 1614 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
Col9a1Q05722 Grip1-208ENSMUST00000138410 3532 ntAPPRIS P3 TSL 1 (best) BASIC6.68□□□□□ -1.34
Col9a1Q05722 Dgkb-201ENSMUST00000040500 6373 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
Col9a1Q05722 Klra1-201ENSMUST00000032288 1668 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
Col9a1Q05722 Olfr293-202ENSMUST00000214401 2852 ntAPPRIS P1 TSL 5 BASIC6.68□□□□□ -1.34
Col9a1Q05722 Olfr1340-202ENSMUST00000213436 1948 ntAPPRIS P1 TSL 5 BASIC6.68□□□□□ -1.34
Col9a1Q05722 Cyp2c65-201ENSMUST00000087236 1928 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
Col9a1Q05722 Son-205ENSMUST00000122302 2449 ntTSL 5 BASIC6.68□□□□□ -1.34
Col9a1Q05722 Rnf24-204ENSMUST00000165420 5833 ntAPPRIS P1 TSL 3 BASIC6.68□□□□□ -1.34
Col9a1Q05722 Erc2-208ENSMUST00000210924 4871 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
Col9a1Q05722 Sgip1-202ENSMUST00000072481 3915 ntAPPRIS ALT2 TSL 1 (best) BASIC6.68□□□□□ -1.34
Col9a1Q05722 Usp14-202ENSMUST00000116669 2019 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
Col9a1Q05722 Slco6d1-202ENSMUST00000160796 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC6.68□□□□□ -1.34
Col9a1Q05722 Gm42397-201ENSMUST00000207472 2002 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
Col9a1Q05722 Gm13648-201ENSMUST00000138361 1536 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
Col9a1Q05722 Sh3d19-203ENSMUST00000182666 6886 ntAPPRIS P1 TSL 5 BASIC6.68□□□□□ -1.34
Col9a1Q05722 Gm11032-201ENSMUST00000109941 102 ntAPPRIS P1 TSL 5 BASIC6.68□□□□□ -1.34
Col9a1Q05722 Hnmt-202ENSMUST00000114497 994 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
Col9a1Q05722 Gm12710-201ENSMUST00000119011 216 ntBASIC6.68□□□□□ -1.34
Col9a1Q05722 Gm11504-201ENSMUST00000120211 173 ntBASIC6.68□□□□□ -1.34
Col9a1Q05722 Fam229b-205ENSMUST00000135785 674 ntAPPRIS P1 TSL 3 BASIC6.68□□□□□ -1.34
Col9a1Q05722 Lrrc75aos1-201ENSMUST00000142492 779 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
Col9a1Q05722 Gm22420-201ENSMUST00000178795 126 ntBASIC6.68□□□□□ -1.34
Col9a1Q05722 Gm21850-201ENSMUST00000179792 359 ntBASIC6.68□□□□□ -1.34
Col9a1Q05722 Gm28017-201ENSMUST00000183434 126 ntBASIC6.68□□□□□ -1.34
Col9a1Q05722 Gm27997-201ENSMUST00000184942 69 ntBASIC6.68□□□□□ -1.34
Col9a1Q05722 Gm29060-201ENSMUST00000185339 457 ntTSL 5 BASIC6.68□□□□□ -1.34
Col9a1Q05722 Gm28664-201ENSMUST00000186118 457 ntTSL 5 BASIC6.68□□□□□ -1.34
Col9a1Q05722 Gm29209-201ENSMUST00000188176 457 ntTSL 5 BASIC6.68□□□□□ -1.34
Col9a1Q05722 Gm29090-201ENSMUST00000188526 457 ntTSL 5 BASIC6.68□□□□□ -1.34
Col9a1Q05722 Gm6059-201ENSMUST00000196903 340 ntBASIC6.68□□□□□ -1.34
Col9a1Q05722 1300002E11Rik-206ENSMUST00000209728 701 ntTSL 2 BASIC6.68□□□□□ -1.34
Col9a1Q05722 Gm10038-201ENSMUST00000077233 441 ntBASIC6.68□□□□□ -1.34
Col9a1Q05722 Gm25682-201ENSMUST00000083942 164 ntBASIC6.68□□□□□ -1.34
Col9a1Q05722 Gm6818-201ENSMUST00000190556 2558 ntBASIC6.68□□□□□ -1.34
Col9a1Q05722 Kcnrg-202ENSMUST00000225582 1821 ntAPPRIS ALT2 BASIC6.68□□□□□ -1.34
Col9a1Q05722 Eif4e2-207ENSMUST00000113235 3473 ntTSL 5 BASIC6.68□□□□□ -1.34
Col9a1Q05722 Mpdz-203ENSMUST00000107262 7518 ntAPPRIS ALT2 TSL 5 BASIC6.68□□□□□ -1.34
Col9a1Q05722 Lum-201ENSMUST00000038160 2448 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
Col9a1Q05722 Gm45406-201ENSMUST00000210161 1637 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
Col9a1Q05722 Gm44007-201ENSMUST00000203845 2189 ntBASIC6.68□□□□□ -1.34
Col9a1Q05722 3110035E14Rik-201ENSMUST00000088666 3256 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
Col9a1Q05722 Pfkfb2-211ENSMUST00000189534 2454 ntAPPRIS ALT2 TSL 1 (best) BASIC6.68□□□□□ -1.34
Col9a1Q05722 Cyhr1-202ENSMUST00000081291 3959 ntAPPRIS P3 TSL 1 (best) BASIC6.67□□□□□ -1.34
Col9a1Q05722 Mlip-211ENSMUST00000184415 1726 ntAPPRIS ALT2 TSL 5 BASIC6.67□□□□□ -1.34
Col9a1Q05722 Olfr857-202ENSMUST00000212013 2306 ntAPPRIS P1 TSL 3 BASIC6.67□□□□□ -1.34
Col9a1Q05722 Gm28178-201ENSMUST00000188544 2943 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
Col9a1Q05722 Gramd1b-204ENSMUST00000121357 7334 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
Col9a1Q05722 Ctnnd1-224ENSMUST00000111698 5850 ntTSL 5 BASIC6.67□□□□□ -1.34
Col9a1Q05722 Cdc40-201ENSMUST00000044166 3534 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
Col9a1Q05722 Rbm46-203ENSMUST00000182818 2115 ntTSL 5 BASIC6.67□□□□□ -1.34
Col9a1Q05722 Tom1l1-204ENSMUST00000107869 1826 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
Col9a1Q05722 Gm17203-201ENSMUST00000164379 4017 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
Col9a1Q05722 Psg22-202ENSMUST00000108481 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC6.67□□□□□ -1.34
Col9a1Q05722 Gm37647-201ENSMUST00000194556 3143 ntBASIC6.67□□□□□ -1.34
Col9a1Q05722 Gm37043-201ENSMUST00000194609 3105 ntBASIC6.67□□□□□ -1.34
Col9a1Q05722 Psg22-203ENSMUST00000208221 1871 ntAPPRIS P2 TSL 1 (best) BASIC6.67□□□□□ -1.34
Col9a1Q05722 Psg22-201ENSMUST00000051973 1869 ntAPPRIS P2 TSL 1 (best) BASIC6.67□□□□□ -1.34
Col9a1Q05722 Gm20486-201ENSMUST00000101544 128 ntBASIC6.67□□□□□ -1.34
Col9a1Q05722 Mir697-201ENSMUST00000102316 109 ntBASIC6.67□□□□□ -1.34
Col9a1Q05722 Trav2-201ENSMUST00000103568 325 ntAPPRIS ALT2 BASIC6.67□□□□□ -1.34
Col9a1Q05722 Trav10n-201ENSMUST00000103612 343 ntAPPRIS P1 BASIC6.67□□□□□ -1.34
Col9a1Q05722 Mir881-201ENSMUST00000104844 78 ntBASIC6.67□□□□□ -1.34
Retrieved 100 of 76,532 protein–RNA pairs in 82.8 ms