Protein–RNA interactions for Protein: P39061

Col18a1, Collagen alpha-1(XVIII) chain, mousemouse

Predictions only

Length 1,774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col18a1P39061 Zfp473-207ENSMUST00000149011 9230 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
Col18a1P39061 AC156636.1-201ENSMUST00000218639 2229 ntBASIC6.51□□□□□ -1.37
Col18a1P39061 Med12l-204ENSMUST00000164225 10264 ntAPPRIS ALT2 TSL 5 BASIC6.51□□□□□ -1.37
Col18a1P39061 Prickle2-204ENSMUST00000113447 7679 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
Col18a1P39061 6330410L21Rik-201ENSMUST00000199846 3871 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
Col18a1P39061 Sult6b1-204ENSMUST00000169544 2060 ntAPPRIS P1 TSL 5 BASIC6.51□□□□□ -1.37
Col18a1P39061 Zfp760-201ENSMUST00000073312 4209 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
Col18a1P39061 Gm42725-201ENSMUST00000199296 4193 ntBASIC6.5□□□□□ -1.37
Col18a1P39061 Hmgb1-203ENSMUST00000110505 1720 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
Col18a1P39061 A730017C20Rik-205ENSMUST00000165666 1911 ntAPPRIS P2 TSL 2 BASIC6.5□□□□□ -1.37
Col18a1P39061 Ttc39d-201ENSMUST00000053168 2022 ntAPPRIS P1 BASIC6.5□□□□□ -1.37
Col18a1P39061 AC169985.1-201ENSMUST00000223648 2439 ntBASIC6.5□□□□□ -1.37
Col18a1P39061 CT025710.1-201ENSMUST00000222949 2533 ntBASIC6.5□□□□□ -1.37
Col18a1P39061 Tmem245-201ENSMUST00000068792 15981 ntAPPRIS ALT2 TSL 5 BASIC6.5□□□□□ -1.37
Col18a1P39061 Gm44026-201ENSMUST00000203985 2088 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
Col18a1P39061 Vmn1r196-202ENSMUST00000226245 5312 ntAPPRIS ALT2 BASIC6.5□□□□□ -1.37
Col18a1P39061 Gm28673-201ENSMUST00000186562 1498 ntTSL 5 BASIC6.5□□□□□ -1.37
Col18a1P39061 Gm37344-203ENSMUST00000195490 1498 ntTSL 5 BASIC6.5□□□□□ -1.37
Col18a1P39061 Olfr457-202ENSMUST00000203396 4404 ntAPPRIS P1 TSL 3 BASIC6.5□□□□□ -1.37
Col18a1P39061 Pbsn-202ENSMUST00000114041 697 ntTSL 2 BASIC6.5□□□□□ -1.37
Col18a1P39061 Gm13132-201ENSMUST00000121194 472 ntBASIC6.5□□□□□ -1.37
Col18a1P39061 Gm12609-201ENSMUST00000129908 610 ntTSL 2 BASIC6.5□□□□□ -1.37
Col18a1P39061 Gm24754-201ENSMUST00000177997 107 ntBASIC6.5□□□□□ -1.37
Col18a1P39061 Gm10719-203ENSMUST00000179272 675 ntAPPRIS ALT2 TSL 5 BASIC6.5□□□□□ -1.37
Col18a1P39061 Gm21894-201ENSMUST00000179631 546 ntBASIC6.5□□□□□ -1.37
Col18a1P39061 Sult2a6-202ENSMUST00000184731 664 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
Col18a1P39061 Gm43645-201ENSMUST00000200129 341 ntTSL 2 BASIC6.5□□□□□ -1.37
Col18a1P39061 Gm44727-201ENSMUST00000204225 451 ntBASIC6.5□□□□□ -1.37
Col18a1P39061 Gm44871-201ENSMUST00000207821 497 ntBASIC6.5□□□□□ -1.37
Col18a1P39061 Olfr1073-ps1-202ENSMUST00000215705 478 ntBASIC6.5□□□□□ -1.37
Col18a1P39061 AC153526.4-201ENSMUST00000217713 379 ntBASIC6.5□□□□□ -1.37
Col18a1P39061 AC115750.1-201ENSMUST00000220441 567 ntBASIC6.5□□□□□ -1.37
Col18a1P39061 Gm4894-201ENSMUST00000067007 357 ntAPPRIS P1 TSL 5 BASIC6.5□□□□□ -1.37
Col18a1P39061 Gm25140-201ENSMUST00000083254 140 ntBASIC6.5□□□□□ -1.37
Col18a1P39061 Mir193a-201ENSMUST00000083461 66 ntBASIC6.5□□□□□ -1.37
Col18a1P39061 Mir338-201ENSMUST00000083666 98 ntBASIC6.5□□□□□ -1.37
Col18a1P39061 Cd59b-201ENSMUST00000090429 796 ntAPPRIS P1 TSL 5 BASIC6.5□□□□□ -1.37
Col18a1P39061 Cfap70-203ENSMUST00000056073 3615 ntAPPRIS P4 TSL 1 (best) BASIC6.5□□□□□ -1.37
Col18a1P39061 Trrap-203ENSMUST00000100467 12479 ntAPPRIS P2 TSL 1 (best) BASIC6.5□□□□□ -1.37
Col18a1P39061 Trrap-202ENSMUST00000094120 12456 ntAPPRIS ALT2 TSL 5 BASIC6.5□□□□□ -1.37
Col18a1P39061 Ktn1-209ENSMUST00000187262 3913 ntAPPRIS ALT2 TSL 5 BASIC6.5□□□□□ -1.37
Col18a1P39061 Olfr1037-202ENSMUST00000213333 1610 ntAPPRIS P1 TSL 5 BASIC6.5□□□□□ -1.37
Col18a1P39061 Lair1-203ENSMUST00000086401 2496 ntAPPRIS P3 TSL 1 (best) BASIC6.5□□□□□ -1.37
Col18a1P39061 Kat6b-ps1-201ENSMUST00000187624 3433 ntBASIC6.5□□□□□ -1.37
Col18a1P39061 Tyr-201ENSMUST00000004770 6042 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
Col18a1P39061 Grik2-207ENSMUST00000218823 9427 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
Col18a1P39061 Vmn1r188-203ENSMUST00000228243 8473 ntAPPRIS P1 BASIC6.5□□□□□ -1.37
Col18a1P39061 Fsbp-201ENSMUST00000180239 4358 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
Col18a1P39061 Mapre1-201ENSMUST00000028981 7336 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
Col18a1P39061 1700006E09Rik-201ENSMUST00000010985 698 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
Col18a1P39061 Gm14899-201ENSMUST00000118673 548 ntBASIC6.49□□□□□ -1.37
Col18a1P39061 Gm15263-201ENSMUST00000121556 642 ntBASIC6.49□□□□□ -1.37
Col18a1P39061 Gm4128-201ENSMUST00000154338 461 ntTSL 3 BASIC6.49□□□□□ -1.37
Col18a1P39061 Gm25713-201ENSMUST00000158625 109 ntBASIC6.49□□□□□ -1.37
Col18a1P39061 Vmn2r-ps74-201ENSMUST00000174705 917 ntBASIC6.49□□□□□ -1.37
Col18a1P39061 Gm9569-201ENSMUST00000187492 787 ntBASIC6.49□□□□□ -1.37
Col18a1P39061 Gm28994-201ENSMUST00000188556 621 ntTSL 5 BASIC6.49□□□□□ -1.37
Col18a1P39061 Gm29545-201ENSMUST00000188878 694 ntBASIC6.49□□□□□ -1.37
Col18a1P39061 Gm19124-201ENSMUST00000191041 832 ntBASIC6.49□□□□□ -1.37
Col18a1P39061 Gm44474-201ENSMUST00000196525 127 ntBASIC6.49□□□□□ -1.37
Col18a1P39061 Gm38413-201ENSMUST00000197852 348 ntTSL 2 BASIC6.49□□□□□ -1.37
Col18a1P39061 Smr2-204ENSMUST00000199635 680 ntAPPRIS ALT2 TSL 1 (best) BASIC6.49□□□□□ -1.37
Col18a1P39061 Gm43505-201ENSMUST00000200579 139 ntBASIC6.49□□□□□ -1.37
Col18a1P39061 Gm20948-201ENSMUST00000211091 449 ntBASIC6.49□□□□□ -1.37
Col18a1P39061 AC122905.1-201ENSMUST00000218181 456 ntTSL 5 BASIC6.49□□□□□ -1.37
Col18a1P39061 CT025602.1-201ENSMUST00000227281 382 ntBASIC6.49□□□□□ -1.37
Col18a1P39061 AC131997.2-201ENSMUST00000227452 362 ntBASIC6.49□□□□□ -1.37
Col18a1P39061 Gm15421-201ENSMUST00000051985 443 ntTSL 3 BASIC6.49□□□□□ -1.37
Col18a1P39061 Mup21-201ENSMUST00000077719 677 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
Col18a1P39061 Gm23300-201ENSMUST00000082712 125 ntBASIC6.49□□□□□ -1.37
Col18a1P39061 Olfr606-201ENSMUST00000098200 960 ntAPPRIS P1 BASIC6.49□□□□□ -1.37
Col18a1P39061 Slc22a29-201ENSMUST00000113298 2271 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
Col18a1P39061 Gabrb3-202ENSMUST00000085240 5712 ntTSL 5 BASIC6.49□□□□□ -1.37
Col18a1P39061 Sytl2-202ENSMUST00000107210 3718 ntAPPRIS ALT2 TSL 1 (best) BASIC6.49□□□□□ -1.37
Col18a1P39061 Olfr965-203ENSMUST00000215164 1722 ntAPPRIS P1 TSL 5 BASIC6.49□□□□□ -1.37
Col18a1P39061 Fcrl5-204ENSMUST00000193229 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC6.49□□□□□ -1.37
Col18a1P39061 Trp53inp1-201ENSMUST00000029865 5404 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
Col18a1P39061 Mboat2-204ENSMUST00000221952 6792 ntAPPRIS ALT2 TSL 1 (best) BASIC6.49□□□□□ -1.37
Col18a1P39061 Pcdh15-202ENSMUST00000092420 6917 ntAPPRIS ALT2 TSL 1 (best) BASIC6.49□□□□□ -1.37
Col18a1P39061 Gm37541-201ENSMUST00000192464 2315 ntBASIC6.49□□□□□ -1.37
Col18a1P39061 Nlrp4c-202ENSMUST00000121583 3373 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
Col18a1P39061 Spta1-201ENSMUST00000027817 8406 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
Col18a1P39061 Stk38l-201ENSMUST00000001675 4550 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
Col18a1P39061 Gm13630-201ENSMUST00000127849 3650 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
Col18a1P39061 Slc22a27-201ENSMUST00000075619 2152 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
Col18a1P39061 Olfr615-203ENSMUST00000215673 3469 ntAPPRIS P1 TSL 5 BASIC6.49□□□□□ -1.37
Col18a1P39061 Mcmdc2-202ENSMUST00000118098 2072 ntTSL 5 BASIC6.49□□□□□ -1.37
Col18a1P39061 Scn9a-203ENSMUST00000112354 6471 ntAPPRIS ALT2 TSL 5 BASIC6.49□□□□□ -1.37
Col18a1P39061 Olfr684-203ENSMUST00000215744 3084 ntAPPRIS P1 TSL 5 BASIC6.49□□□□□ -1.37
Col18a1P39061 Gm12370-201ENSMUST00000117809 604 ntBASIC6.49□□□□□ -1.37
Col18a1P39061 Gm12290-201ENSMUST00000145095 2112 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
Col18a1P39061 Gm24939-201ENSMUST00000158325 137 ntBASIC6.49□□□□□ -1.37
Col18a1P39061 Gm22160-201ENSMUST00000158405 328 ntBASIC6.49□□□□□ -1.37
Col18a1P39061 Gm26005-201ENSMUST00000158802 134 ntBASIC6.49□□□□□ -1.37
Col18a1P39061 Zfp131-202ENSMUST00000178271 2966 ntAPPRIS P3 TSL 1 (best) BASIC6.49□□□□□ -1.37
Col18a1P39061 Mir6951-201ENSMUST00000183910 75 ntBASIC6.49□□□□□ -1.37
Col18a1P39061 Mir8097-201ENSMUST00000185150 119 ntBASIC6.49□□□□□ -1.37
Col18a1P39061 Gm31230-201ENSMUST00000199725 785 ntBASIC6.49□□□□□ -1.37
Col18a1P39061 Gm45639-201ENSMUST00000211205 710 ntTSL 5 BASIC6.49□□□□□ -1.37
Col18a1P39061 Olfr1142-ps1-201ENSMUST00000213624 805 ntBASIC6.49□□□□□ -1.37
Retrieved 100 of 76,532 protein–RNA pairs in 106.6 ms