Protein–RNA interactions for Protein: A0A075B617

Trav16d-dv11, T cell receptor alpha variable 16D-DV11 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav16d-dv11A0A075B617 4930583I09Rik-201ENSMUST00000024896 630 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
Trav16d-dv11A0A075B617 Olfr734-201ENSMUST00000050928 1033 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
Trav16d-dv11A0A075B617 Skint10-202ENSMUST00000068851 493 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
Trav16d-dv11A0A075B617 Olfr480-201ENSMUST00000071658 1029 ntBASIC3.19□□□□□ -1.9
Trav16d-dv11A0A075B617 Gm10112-201ENSMUST00000075226 354 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
Trav16d-dv11A0A075B617 Gm22868-201ENSMUST00000083955 164 ntBASIC3.19□□□□□ -1.9
Trav16d-dv11A0A075B617 Gm28242-201ENSMUST00000187274 1492 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
Trav16d-dv11A0A075B617 Gm43843-201ENSMUST00000202396 1587 ntBASIC3.19□□□□□ -1.9
Trav16d-dv11A0A075B617 Csmd3-209ENSMUST00000162830 13012 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
Trav16d-dv11A0A075B617 Gm37323-201ENSMUST00000195771 2773 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
Trav16d-dv11A0A075B617 Zfp458-201ENSMUST00000045969 3488 ntAPPRIS P2 TSL 1 (best) BASIC3.19□□□□□ -1.9
Trav16d-dv11A0A075B617 Olfr711-201ENSMUST00000051715 3035 ntAPPRIS P1 TSL 2 BASIC3.19□□□□□ -1.9
Trav16d-dv11A0A075B617 Gm42949-201ENSMUST00000197054 2202 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
Trav16d-dv11A0A075B617 5930409G06Rik-201ENSMUST00000192347 1544 ntBASIC3.19□□□□□ -1.9
Trav16d-dv11A0A075B617 AC121997.2-203ENSMUST00000228613 4192 ntBASIC3.19□□□□□ -1.9
Trav16d-dv11A0A075B617 Olfr1277-202ENSMUST00000214760 5944 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
Trav16d-dv11A0A075B617 Mmp12-203ENSMUST00000120655 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC3.18□□□□□ -1.9
Trav16d-dv11A0A075B617 Gm28488-203ENSMUST00000188792 1498 ntTSL 5 BASIC3.18□□□□□ -1.9
Trav16d-dv11A0A075B617 Gm5724-201ENSMUST00000148411 2449 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
Trav16d-dv11A0A075B617 Gm7451-201ENSMUST00000208382 1392 ntBASIC3.18□□□□□ -1.9
Trav16d-dv11A0A075B617 Nat2-201ENSMUST00000093470 1396 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
Trav16d-dv11A0A075B617 Arrdc3-201ENSMUST00000099356 4101 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
Trav16d-dv11A0A075B617 Neto2-201ENSMUST00000109686 5610 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
Trav16d-dv11A0A075B617 Gm22374-201ENSMUST00000104583 132 ntBASIC3.18□□□□□ -1.9
Trav16d-dv11A0A075B617 Apoa2-203ENSMUST00000111320 470 ntAPPRIS P1 TSL 2 BASIC3.18□□□□□ -1.9
Trav16d-dv11A0A075B617 Apool-202ENSMUST00000113415 783 ntAPPRIS ALT2 TSL 5 BASIC3.18□□□□□ -1.9
Trav16d-dv11A0A075B617 Gm14786-201ENSMUST00000117127 944 ntBASIC3.18□□□□□ -1.9
Trav16d-dv11A0A075B617 Gm13737-201ENSMUST00000119793 232 ntBASIC3.18□□□□□ -1.9
Trav16d-dv11A0A075B617 Gm16068-201ENSMUST00000136557 504 ntTSL 3 BASIC3.18□□□□□ -1.9
Trav16d-dv11A0A075B617 Gm13617-201ENSMUST00000155350 675 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
Trav16d-dv11A0A075B617 Gm23959-201ENSMUST00000157208 324 ntBASIC3.18□□□□□ -1.9
Trav16d-dv11A0A075B617 Gm24435-201ENSMUST00000157886 110 ntBASIC3.18□□□□□ -1.9
Trav16d-dv11A0A075B617 Gm10319-202ENSMUST00000159439 846 ntBASIC3.18□□□□□ -1.9
Trav16d-dv11A0A075B617 Snrpe-201ENSMUST00000164096 669 ntTSL 2 BASIC3.18□□□□□ -1.9
Trav16d-dv11A0A075B617 Vmn2r-ps35-201ENSMUST00000169206 831 ntBASIC3.18□□□□□ -1.9
Trav16d-dv11A0A075B617 Svs4-201ENSMUST00000017142 731 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
Trav16d-dv11A0A075B617 Mir3473g-201ENSMUST00000183494 136 ntBASIC3.18□□□□□ -1.9
Trav16d-dv11A0A075B617 Ly6c1-203ENSMUST00000185200 540 ntTSL 2 BASIC3.18□□□□□ -1.9
Trav16d-dv11A0A075B617 1700111N16Rik-201ENSMUST00000188663 1133 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
Trav16d-dv11A0A075B617 Gm28769-201ENSMUST00000190176 615 ntBASIC3.18□□□□□ -1.9
Trav16d-dv11A0A075B617 Gm42484-201ENSMUST00000196075 2104 ntBASIC3.18□□□□□ -1.9
Trav16d-dv11A0A075B617 Gm42619-201ENSMUST00000197564 1136 ntBASIC3.18□□□□□ -1.9
Trav16d-dv11A0A075B617 Gm7825-201ENSMUST00000204046 416 ntBASIC3.18□□□□□ -1.9
Trav16d-dv11A0A075B617 Gm19237-201ENSMUST00000205036 1132 ntBASIC3.18□□□□□ -1.9
Trav16d-dv11A0A075B617 B130024G19Rik-205ENSMUST00000207952 485 ntTSL 3 BASIC3.18□□□□□ -1.9
Trav16d-dv11A0A075B617 Gm32916-203ENSMUST00000208033 789 ntTSL 5 BASIC3.18□□□□□ -1.9
Trav16d-dv11A0A075B617 Gm18258-201ENSMUST00000210413 542 ntBASIC3.18□□□□□ -1.9
Trav16d-dv11A0A075B617 Gm45334-201ENSMUST00000211118 1227 ntTSL 5 BASIC3.18□□□□□ -1.9
Trav16d-dv11A0A075B617 Gm33756-201ENSMUST00000211358 636 ntTSL 5 BASIC3.18□□□□□ -1.9
Trav16d-dv11A0A075B617 Gm32975-201ENSMUST00000211651 584 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
Trav16d-dv11A0A075B617 Olfr367-ps-203ENSMUST00000213819 541 ntTSL 3 BASIC3.18□□□□□ -1.9
Trav16d-dv11A0A075B617 AC123832.2-201ENSMUST00000215151 129 ntBASIC3.18□□□□□ -1.9
Trav16d-dv11A0A075B617 Gm3942-201ENSMUST00000218495 666 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
Trav16d-dv11A0A075B617 A330049N07Rik-202ENSMUST00000219920 587 ntTSL 5 BASIC3.18□□□□□ -1.9
Trav16d-dv11A0A075B617 4930452L12Rik-201ENSMUST00000220158 785 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
Trav16d-dv11A0A075B617 AC127337.1-201ENSMUST00000220423 625 ntTSL 2 BASIC3.18□□□□□ -1.9
Trav16d-dv11A0A075B617 Rpl29-ps2-202ENSMUST00000220540 1165 ntTSL 5 BASIC3.18□□□□□ -1.9
Trav16d-dv11A0A075B617 Gm40658-202ENSMUST00000221900 701 ntTSL 5 BASIC3.18□□□□□ -1.9
Trav16d-dv11A0A075B617 Gm30198-201ENSMUST00000222873 824 ntTSL 2 BASIC3.18□□□□□ -1.9
Trav16d-dv11A0A075B617 AC118006.1-201ENSMUST00000224211 501 ntBASIC3.18□□□□□ -1.9
Trav16d-dv11A0A075B617 AC133910.1-201ENSMUST00000228128 624 ntBASIC3.18□□□□□ -1.9
Trav16d-dv11A0A075B617 Gm10491-201ENSMUST00000085330 117 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
Trav16d-dv11A0A075B617 Olfr599-201ENSMUST00000098201 1050 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
Trav16d-dv11A0A075B617 Olfr1242-204ENSMUST00000216001 2569 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
Trav16d-dv11A0A075B617 Gm17308-201ENSMUST00000181749 1997 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
Trav16d-dv11A0A075B617 Esp3-201ENSMUST00000177574 1316 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
Trav16d-dv11A0A075B617 Olfr1323-203ENSMUST00000213556 5431 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
Trav16d-dv11A0A075B617 Gm37527-201ENSMUST00000192406 3547 ntBASIC3.17□□□□□ -1.9
Trav16d-dv11A0A075B617 Pak3-201ENSMUST00000033640 8348 ntAPPRIS ALT1 TSL 1 (best) BASIC3.17□□□□□ -1.9
Trav16d-dv11A0A075B617 Gtf3c3-201ENSMUST00000041638 4582 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
Trav16d-dv11A0A075B617 Olfr726-206ENSMUST00000217025 1363 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
Trav16d-dv11A0A075B617 AC153964.1-201ENSMUST00000219677 3142 ntBASIC3.17□□□□□ -1.9
Trav16d-dv11A0A075B617 Igkv4-69-201ENSMUST00000103349 348 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
Trav16d-dv11A0A075B617 Trav8-1-201ENSMUST00000103643 328 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
Trav16d-dv11A0A075B617 Traj11-201ENSMUST00000103730 59 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
Trav16d-dv11A0A075B617 Gm24124-201ENSMUST00000104103 132 ntBASIC3.17□□□□□ -1.9
Trav16d-dv11A0A075B617 Vmn1r120-201ENSMUST00000105202 918 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
Trav16d-dv11A0A075B617 Gm15293-201ENSMUST00000110754 418 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
Trav16d-dv11A0A075B617 Gm14836-201ENSMUST00000118567 471 ntBASIC3.17□□□□□ -1.9
Trav16d-dv11A0A075B617 Gm14541-201ENSMUST00000118985 157 ntBASIC3.17□□□□□ -1.9
Trav16d-dv11A0A075B617 Gm6062-201ENSMUST00000120462 631 ntBASIC3.17□□□□□ -1.9
Trav16d-dv11A0A075B617 Gm7879-201ENSMUST00000122204 774 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
Trav16d-dv11A0A075B617 Chrna1os-201ENSMUST00000125413 680 ntTSL 3 BASIC3.17□□□□□ -1.9
Trav16d-dv11A0A075B617 Gm11844-201ENSMUST00000129207 459 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
Trav16d-dv11A0A075B617 Xaf1-202ENSMUST00000140842 651 ntTSL 3 BASIC3.17□□□□□ -1.9
Trav16d-dv11A0A075B617 Igfl3-201ENSMUST00000152973 575 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
Trav16d-dv11A0A075B617 Gm14549-201ENSMUST00000154993 1035 ntTSL 5 BASIC3.17□□□□□ -1.9
Trav16d-dv11A0A075B617 Gm26187-201ENSMUST00000157693 101 ntBASIC3.17□□□□□ -1.9
Trav16d-dv11A0A075B617 Gm8224-201ENSMUST00000166178 497 ntBASIC3.17□□□□□ -1.9
Trav16d-dv11A0A075B617 Gm2056-201ENSMUST00000178852 435 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
Trav16d-dv11A0A075B617 Gm26895-201ENSMUST00000181295 619 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
Trav16d-dv11A0A075B617 Gm27409-201ENSMUST00000184727 80 ntBASIC3.17□□□□□ -1.9
Trav16d-dv11A0A075B617 Gm28471-201ENSMUST00000185994 615 ntBASIC3.17□□□□□ -1.9
Trav16d-dv11A0A075B617 Gm28598-201ENSMUST00000186490 615 ntBASIC3.17□□□□□ -1.9
Trav16d-dv11A0A075B617 Gm29268-201ENSMUST00000188669 615 ntBASIC3.17□□□□□ -1.9
Trav16d-dv11A0A075B617 Gm5252-201ENSMUST00000189030 909 ntBASIC3.17□□□□□ -1.9
Trav16d-dv11A0A075B617 Gm9775-201ENSMUST00000189402 331 ntBASIC3.17□□□□□ -1.9
Trav16d-dv11A0A075B617 Scgb2b9-ps-201ENSMUST00000189522 334 ntBASIC3.17□□□□□ -1.9
Trav16d-dv11A0A075B617 Gm29218-205ENSMUST00000190846 615 ntBASIC3.17□□□□□ -1.9
Trav16d-dv11A0A075B617 Gm28969-211ENSMUST00000190992 615 ntBASIC3.17□□□□□ -1.9
Retrieved 100 of 76,532 protein–RNA pairs in 112.8 ms