Protein–RNA interactions for Protein: Q69ZI1

Sh3rf1, E3 ubiquitin-protein ligase SH3RF1, mousemouse

Predictions only

Length 892 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf1Q69ZI1 Gm25428-201ENSMUST00000157608 114 ntBASIC5.92□□□□□ -1.46
Sh3rf1Q69ZI1 Gm17196-201ENSMUST00000164074 345 ntTSL 5 BASIC5.92□□□□□ -1.46
Sh3rf1Q69ZI1 Gm24757-201ENSMUST00000176987 371 ntBASIC5.92□□□□□ -1.46
Sh3rf1Q69ZI1 Gm9944-201ENSMUST00000177649 309 ntAPPRIS P1 BASIC5.92□□□□□ -1.46
Sh3rf1Q69ZI1 Gm26969-201ENSMUST00000183203 648 ntTSL 3 BASIC5.92□□□□□ -1.46
Sh3rf1Q69ZI1 Gm27960-201ENSMUST00000183445 184 ntBASIC5.92□□□□□ -1.46
Sh3rf1Q69ZI1 Gm29591-201ENSMUST00000188215 357 ntTSL 5 BASIC5.92□□□□□ -1.46
Sh3rf1Q69ZI1 Gm28080-201ENSMUST00000188552 722 ntBASIC5.92□□□□□ -1.46
Sh3rf1Q69ZI1 BC037156-201ENSMUST00000196993 430 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
Sh3rf1Q69ZI1 Gm32591-202ENSMUST00000204063 403 ntTSL 3 BASIC5.92□□□□□ -1.46
Sh3rf1Q69ZI1 Gm45026-201ENSMUST00000205292 833 ntBASIC5.92□□□□□ -1.46
Sh3rf1Q69ZI1 Gm45069-201ENSMUST00000208604 317 ntTSL 2 BASIC5.92□□□□□ -1.46
Sh3rf1Q69ZI1 Gm45556-201ENSMUST00000210689 345 ntTSL 5 BASIC5.92□□□□□ -1.46
Sh3rf1Q69ZI1 CAAA01216754.4-202ENSMUST00000215276 610 ntBASIC5.92□□□□□ -1.46
Sh3rf1Q69ZI1 AC133650.1-201ENSMUST00000217243 578 ntBASIC5.92□□□□□ -1.46
Sh3rf1Q69ZI1 AC147240.1-201ENSMUST00000218767 431 ntBASIC5.92□□□□□ -1.46
Sh3rf1Q69ZI1 AC153548.2-201ENSMUST00000219770 885 ntBASIC5.92□□□□□ -1.46
Sh3rf1Q69ZI1 Cd160-201ENSMUST00000047702 1121 ntAPPRIS P3 TSL 1 (best) BASIC5.92□□□□□ -1.46
Sh3rf1Q69ZI1 Olfr131-201ENSMUST00000059560 1030 ntAPPRIS P1 BASIC5.92□□□□□ -1.46
Sh3rf1Q69ZI1 B020031M17Rik-201ENSMUST00000080505 522 ntAPPRIS P1 BASIC5.92□□□□□ -1.46
Sh3rf1Q69ZI1 Gm38190-201ENSMUST00000192350 4755 ntBASIC5.92□□□□□ -1.46
Sh3rf1Q69ZI1 Olfr1173-201ENSMUST00000099830 2268 ntAPPRIS P1 TSL 5 BASIC5.92□□□□□ -1.46
Sh3rf1Q69ZI1 Psd3-206ENSMUST00000120071 9203 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
Sh3rf1Q69ZI1 Armc4-201ENSMUST00000081275 3477 ntAPPRIS P1 TSL 5 BASIC5.92□□□□□ -1.46
Sh3rf1Q69ZI1 Vmn1r220-205ENSMUST00000228239 7849 ntAPPRIS P1 BASIC5.92□□□□□ -1.46
Sh3rf1Q69ZI1 Nat1-201ENSMUST00000026677 1347 ntAPPRIS P2 BASIC5.92□□□□□ -1.46
Sh3rf1Q69ZI1 Stx19-201ENSMUST00000055557 2812 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
Sh3rf1Q69ZI1 Usp47-202ENSMUST00000210309 5816 ntAPPRIS ALT2 TSL 1 (best) BASIC5.92□□□□□ -1.46
Sh3rf1Q69ZI1 Map7d3-201ENSMUST00000114766 2891 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
Sh3rf1Q69ZI1 Gm42715-201ENSMUST00000189629 12746 ntAPPRIS P5 TSL 5 BASIC5.92□□□□□ -1.46
Sh3rf1Q69ZI1 Map2-201ENSMUST00000024639 5195 ntTSL 5 BASIC5.92□□□□□ -1.46
Sh3rf1Q69ZI1 Tnpo1-202ENSMUST00000109401 8453 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
Sh3rf1Q69ZI1 AC122769.3-201ENSMUST00000227739 3245 ntBASIC5.91□□□□□ -1.46
Sh3rf1Q69ZI1 Gm42531-201ENSMUST00000201648 4048 ntBASIC5.91□□□□□ -1.46
Sh3rf1Q69ZI1 Bbox1-201ENSMUST00000046233 4030 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
Sh3rf1Q69ZI1 Crem-230ENSMUST00000151311 2485 ntAPPRIS ALT1 TSL 5 BASIC5.91□□□□□ -1.46
Sh3rf1Q69ZI1 Gm43302-201ENSMUST00000050011 4310 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
Sh3rf1Q69ZI1 BC051142-202ENSMUST00000097348 1732 ntAPPRIS ALT2 TSL 5 BASIC5.91□□□□□ -1.46
Sh3rf1Q69ZI1 Anapc10-201ENSMUST00000048147 2801 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
Sh3rf1Q69ZI1 Mnat1-202ENSMUST00000187549 3688 ntTSL 5 BASIC5.91□□□□□ -1.46
Sh3rf1Q69ZI1 Fcrl5-203ENSMUST00000178261 1791 ntAPPRIS ALT2 TSL 5 BASIC5.91□□□□□ -1.46
Sh3rf1Q69ZI1 Fcrl5-201ENSMUST00000049926 1791 ntAPPRIS P4 TSL 5 BASIC5.91□□□□□ -1.46
Sh3rf1Q69ZI1 Rgs17-204ENSMUST00000131996 8107 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
Sh3rf1Q69ZI1 Atp8a2-201ENSMUST00000080368 12886 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
Sh3rf1Q69ZI1 Lypd6-205ENSMUST00000169232 3499 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
Sh3rf1Q69ZI1 Olfr818-203ENSMUST00000215527 1849 ntAPPRIS P1 TSL 5 BASIC5.91□□□□□ -1.46
Sh3rf1Q69ZI1 Trbv12-2-201ENSMUST00000103269 385 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
Sh3rf1Q69ZI1 Gm13090-201ENSMUST00000105667 746 ntAPPRIS P1 TSL 3 BASIC5.91□□□□□ -1.46
Sh3rf1Q69ZI1 Gm23653-201ENSMUST00000116751 97 ntBASIC5.91□□□□□ -1.46
Sh3rf1Q69ZI1 Gm15076-201ENSMUST00000117076 474 ntBASIC5.91□□□□□ -1.46
Sh3rf1Q69ZI1 Gm11408-201ENSMUST00000117889 519 ntBASIC5.91□□□□□ -1.46
Sh3rf1Q69ZI1 Gm9059-201ENSMUST00000118319 183 ntBASIC5.91□□□□□ -1.46
Sh3rf1Q69ZI1 Gm14930-201ENSMUST00000118864 652 ntBASIC5.91□□□□□ -1.46
Sh3rf1Q69ZI1 Gng2-ps1-201ENSMUST00000120523 217 ntBASIC5.91□□□□□ -1.46
Sh3rf1Q69ZI1 Gm11852-201ENSMUST00000120806 222 ntBASIC5.91□□□□□ -1.46
Sh3rf1Q69ZI1 Rpl23a-ps4-201ENSMUST00000121008 455 ntBASIC5.91□□□□□ -1.46
Sh3rf1Q69ZI1 Dnal1-203ENSMUST00000136159 403 ntTSL 5 BASIC5.91□□□□□ -1.46
Sh3rf1Q69ZI1 Gm11528-201ENSMUST00000156822 914 ntTSL 2 BASIC5.91□□□□□ -1.46
Sh3rf1Q69ZI1 Snora47-201ENSMUST00000157483 138 ntBASIC5.91□□□□□ -1.46
Sh3rf1Q69ZI1 Rpl28-ps4-201ENSMUST00000170447 377 ntBASIC5.91□□□□□ -1.46
Sh3rf1Q69ZI1 Gm18199-201ENSMUST00000173820 835 ntBASIC5.91□□□□□ -1.46
Sh3rf1Q69ZI1 Gm21070-201ENSMUST00000182425 985 ntBASIC5.91□□□□□ -1.46
Sh3rf1Q69ZI1 Gm27640-201ENSMUST00000184580 147 ntBASIC5.91□□□□□ -1.46
Sh3rf1Q69ZI1 Snhg14-205ENSMUST00000186345 456 ntTSL 5 BASIC5.91□□□□□ -1.46
Sh3rf1Q69ZI1 Gm28930-201ENSMUST00000189525 437 ntTSL 5 BASIC5.91□□□□□ -1.46
Sh3rf1Q69ZI1 A830029E22Rik-201ENSMUST00000193672 1194 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
Sh3rf1Q69ZI1 Gm37418-201ENSMUST00000195031 274 ntBASIC5.91□□□□□ -1.46
Sh3rf1Q69ZI1 Gm37220-201ENSMUST00000195179 415 ntTSL 5 BASIC5.91□□□□□ -1.46
Sh3rf1Q69ZI1 Gm18427-201ENSMUST00000195422 515 ntBASIC5.91□□□□□ -1.46
Sh3rf1Q69ZI1 Gm43617-201ENSMUST00000196418 606 ntTSL 2 BASIC5.91□□□□□ -1.46
Sh3rf1Q69ZI1 Gm20940-201ENSMUST00000197308 360 ntBASIC5.91□□□□□ -1.46
Sh3rf1Q69ZI1 Gm43467-201ENSMUST00000197441 437 ntBASIC5.91□□□□□ -1.46
Sh3rf1Q69ZI1 Gm9173-201ENSMUST00000198054 400 ntBASIC5.91□□□□□ -1.46
Sh3rf1Q69ZI1 AC134333.1-201ENSMUST00000204536 944 ntBASIC5.91□□□□□ -1.46
Sh3rf1Q69ZI1 Gm29791-201ENSMUST00000207144 380 ntTSL 3 BASIC5.91□□□□□ -1.46
Sh3rf1Q69ZI1 AC118476.1-201ENSMUST00000216237 349 ntTSL 3 BASIC5.91□□□□□ -1.46
Sh3rf1Q69ZI1 Gm2628-201ENSMUST00000218019 426 ntBASIC5.91□□□□□ -1.46
Sh3rf1Q69ZI1 AC127242.4-201ENSMUST00000221242 470 ntBASIC5.91□□□□□ -1.46
Sh3rf1Q69ZI1 Serf1-201ENSMUST00000022145 601 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
Sh3rf1Q69ZI1 AC155634.2-201ENSMUST00000222001 489 ntTSL 3 BASIC5.91□□□□□ -1.46
Sh3rf1Q69ZI1 AC125539.2-201ENSMUST00000228339 753 ntBASIC5.91□□□□□ -1.46
Sh3rf1Q69ZI1 Vmn1r26-201ENSMUST00000049694 1020 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
Sh3rf1Q69ZI1 Vmn1r49-201ENSMUST00000071865 933 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
Sh3rf1Q69ZI1 Gm25515-201ENSMUST00000083858 157 ntBASIC5.91□□□□□ -1.46
Sh3rf1Q69ZI1 Fam183b-202ENSMUST00000094156 567 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
Sh3rf1Q69ZI1 Dcun1d1-212ENSMUST00000198389 3020 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
Sh3rf1Q69ZI1 Vmn1r9-202ENSMUST00000227399 6778 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
Sh3rf1Q69ZI1 A330087D11Rik-201ENSMUST00000187265 1334 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
Sh3rf1Q69ZI1 Zfp317-202ENSMUST00000208694 3988 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
Sh3rf1Q69ZI1 Olfr1215-203ENSMUST00000216271 2608 ntAPPRIS P1 TSL 3 BASIC5.91□□□□□ -1.46
Sh3rf1Q69ZI1 Gm5346-201ENSMUST00000056023 2326 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
Sh3rf1Q69ZI1 Dnah2-201ENSMUST00000035539 13569 ntAPPRIS ALT2 TSL 5 BASIC5.91□□□□□ -1.46
Sh3rf1Q69ZI1 Gm3106-201ENSMUST00000179743 2383 ntAPPRIS P1 TSL 5 BASIC5.91□□□□□ -1.46
Sh3rf1Q69ZI1 Gm37903-201ENSMUST00000192122 2381 ntBASIC5.91□□□□□ -1.46
Sh3rf1Q69ZI1 Gm42661-201ENSMUST00000202364 1442 ntBASIC5.91□□□□□ -1.46
Sh3rf1Q69ZI1 Gm42561-201ENSMUST00000202563 1442 ntBASIC5.91□□□□□ -1.46
Sh3rf1Q69ZI1 Olfr690-203ENSMUST00000216230 2085 ntAPPRIS P1 TSL 5 BASIC5.9□□□□□ -1.46
Sh3rf1Q69ZI1 Gm19084-201ENSMUST00000222939 1762 ntBASIC5.9□□□□□ -1.46
Sh3rf1Q69ZI1 Ift80-208ENSMUST00000169064 4064 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
Sh3rf1Q69ZI1 Fbxw25-201ENSMUST00000163839 1490 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
Retrieved 100 of 76,532 protein–RNA pairs in 77.7 ms