Protein–RNA interactions for Protein: P53783

Sox1, Transcription factor SOX-1, mousemouse

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox1P53783 Gm42539-201ENSMUST00000197009 308 ntBASIC6.03□□□□□ -1.44
Sox1P53783 Igkv3-12-1-201ENSMUST00000197093 351 ntBASIC6.03□□□□□ -1.44
Sox1P53783 Gm43494-201ENSMUST00000197672 388 ntBASIC6.03□□□□□ -1.44
Sox1P53783 Gm43142-201ENSMUST00000198670 361 ntBASIC6.03□□□□□ -1.44
Sox1P53783 Gm43561-201ENSMUST00000199866 448 ntBASIC6.03□□□□□ -1.44
Sox1P53783 Gm33248-202ENSMUST00000206954 486 ntTSL 5 BASIC6.03□□□□□ -1.44
Sox1P53783 Gm44516-201ENSMUST00000208794 833 ntTSL 5 BASIC6.03□□□□□ -1.44
Sox1P53783 Olfr1035-ps1-202ENSMUST00000213364 288 ntTSL 5 BASIC6.03□□□□□ -1.44
Sox1P53783 Ss18l2-204ENSMUST00000215104 315 ntTSL 5 BASIC6.03□□□□□ -1.44
Sox1P53783 AC159379.1-201ENSMUST00000218192 620 ntTSL 5 BASIC6.03□□□□□ -1.44
Sox1P53783 AC132384.5-201ENSMUST00000218562 226 ntBASIC6.03□□□□□ -1.44
Sox1P53783 AC132954.1-201ENSMUST00000221017 342 ntBASIC6.03□□□□□ -1.44
Sox1P53783 CT025667.1-201ENSMUST00000225872 382 ntBASIC6.03□□□□□ -1.44
Sox1P53783 AC161383.1-201ENSMUST00000227356 527 ntBASIC6.03□□□□□ -1.44
Sox1P53783 Olfr906-201ENSMUST00000045493 936 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
Sox1P53783 Sprr2d-201ENSMUST00000047477 681 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
Sox1P53783 Olfr705-201ENSMUST00000060879 951 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
Sox1P53783 BC048502-201ENSMUST00000065978 718 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
Sox1P53783 Olfr857-201ENSMUST00000077023 930 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
Sox1P53783 Olfr689-201ENSMUST00000098153 1076 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
Sox1P53783 Txndc9-201ENSMUST00000162031 3381 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
Sox1P53783 B020004C17Rik-201ENSMUST00000178161 2385 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
Sox1P53783 AC162936.1-201ENSMUST00000223676 2368 ntBASIC6.03□□□□□ -1.44
Sox1P53783 AC167013.5-201ENSMUST00000227597 2947 ntBASIC6.03□□□□□ -1.44
Sox1P53783 Gm38118-201ENSMUST00000192052 2222 ntBASIC6.03□□□□□ -1.44
Sox1P53783 Ctage5-217ENSMUST00000176892 2784 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
Sox1P53783 Nxt2-203ENSMUST00000112914 2484 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
Sox1P53783 Olfr1309-204ENSMUST00000215045 5236 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
Sox1P53783 Vmn1r196-205ENSMUST00000228557 5790 ntAPPRIS P2 BASIC6.03□□□□□ -1.44
Sox1P53783 Rnf219-201ENSMUST00000022716 3420 ntAPPRIS P2 TSL 3 BASIC6.03□□□□□ -1.44
Sox1P53783 Vmn1r35-203ENSMUST00000227354 2319 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
Sox1P53783 Gm3115-201ENSMUST00000166928 1797 ntAPPRIS P5 TSL 5 BASIC6.03□□□□□ -1.44
Sox1P53783 Gm6337-201ENSMUST00000168088 1758 ntAPPRIS P5 TSL 5 BASIC6.03□□□□□ -1.44
Sox1P53783 Nsun6-208ENSMUST00000195749 3149 ntAPPRIS P3 TSL 5 BASIC6.03□□□□□ -1.44
Sox1P53783 Anks4b-201ENSMUST00000033201 3900 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
Sox1P53783 Clcn5-201ENSMUST00000004428 8390 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
Sox1P53783 Gabrq-201ENSMUST00000033711 2000 ntAPPRIS P3 TSL 1 (best) BASIC6.03□□□□□ -1.44
Sox1P53783 Dmtf1-207ENSMUST00000183973 2408 ntAPPRIS ALT1 TSL 5 BASIC6.03□□□□□ -1.44
Sox1P53783 Gm38126-201ENSMUST00000195297 4003 ntBASIC6.02□□□□□ -1.44
Sox1P53783 Stat4-202ENSMUST00000168302 2662 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.44
Sox1P53783 Meg3-209ENSMUST00000146701 14548 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
Sox1P53783 AC154406.1-201ENSMUST00000215220 2529 ntBASIC6.02□□□□□ -1.45
Sox1P53783 Olfr571-203ENSMUST00000215773 5153 ntAPPRIS P1 TSL 5 BASIC6.02□□□□□ -1.45
Sox1P53783 AC162910.1-201ENSMUST00000221219 1723 ntBASIC6.02□□□□□ -1.45
Sox1P53783 Adgrl3-203ENSMUST00000117253 4764 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
Sox1P53783 Atp2b1-201ENSMUST00000020107 7130 ntAPPRIS P1 TSL 5 BASIC6.02□□□□□ -1.45
Sox1P53783 Gm43886-201ENSMUST00000205039 2386 ntBASIC6.02□□□□□ -1.45
Sox1P53783 Specc1-217ENSMUST00000202905 3841 ntAPPRIS ALT2 TSL 5 BASIC6.02□□□□□ -1.45
Sox1P53783 Gm13219-203ENSMUST00000154223 1843 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
Sox1P53783 Gm13089-201ENSMUST00000073532 1807 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
Sox1P53783 Itih2-201ENSMUST00000042290 3100 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
Sox1P53783 AC155941.4-201ENSMUST00000219731 2705 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
Sox1P53783 Gm42892-201ENSMUST00000196227 3973 ntBASIC6.02□□□□□ -1.45
Sox1P53783 Stk36-203ENSMUST00000113694 629 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
Sox1P53783 Gm6134-201ENSMUST00000117265 171 ntBASIC6.02□□□□□ -1.45
Sox1P53783 Gm16100-201ENSMUST00000120489 231 ntBASIC6.02□□□□□ -1.45
Sox1P53783 Gm25292-201ENSMUST00000122797 322 ntBASIC6.02□□□□□ -1.45
Sox1P53783 Gm12162-201ENSMUST00000123422 154 ntTSL 5 BASIC6.02□□□□□ -1.45
Sox1P53783 Gm12914-201ENSMUST00000148635 305 ntTSL 5 BASIC6.02□□□□□ -1.45
Sox1P53783 Fabp7-202ENSMUST00000165013 880 ntTSL 2 BASIC6.02□□□□□ -1.45
Sox1P53783 Gm28008-201ENSMUST00000184021 186 ntBASIC6.02□□□□□ -1.45
Sox1P53783 Gm29638-201ENSMUST00000186106 371 ntTSL 3 BASIC6.02□□□□□ -1.45
Sox1P53783 Olfr1252-201ENSMUST00000186710 1099 ntAPPRIS P1 BASIC6.02□□□□□ -1.45
Sox1P53783 Gm29345-201ENSMUST00000189213 399 ntTSL 3 BASIC6.02□□□□□ -1.45
Sox1P53783 Gm37774-201ENSMUST00000194401 245 ntBASIC6.02□□□□□ -1.45
Sox1P53783 Gm33354-201ENSMUST00000195448 906 ntBASIC6.02□□□□□ -1.45
Sox1P53783 Gm5551-201ENSMUST00000199720 690 ntBASIC6.02□□□□□ -1.45
Sox1P53783 Gm42468-201ENSMUST00000200360 703 ntTSL 3 BASIC6.02□□□□□ -1.45
Sox1P53783 4930443G03Rik-201ENSMUST00000203475 1282 ntBASIC6.02□□□□□ -1.45
Sox1P53783 Gm17780-201ENSMUST00000207142 612 ntBASIC6.02□□□□□ -1.45
Sox1P53783 Gm18468-201ENSMUST00000207321 369 ntBASIC6.02□□□□□ -1.45
Sox1P53783 Gm18470-201ENSMUST00000207467 420 ntBASIC6.02□□□□□ -1.45
Sox1P53783 Gm18465-201ENSMUST00000207468 369 ntBASIC6.02□□□□□ -1.45
Sox1P53783 Gm18464-201ENSMUST00000207803 420 ntBASIC6.02□□□□□ -1.45
Sox1P53783 Gm18458-201ENSMUST00000207908 369 ntBASIC6.02□□□□□ -1.45
Sox1P53783 Gm18461-201ENSMUST00000208421 420 ntBASIC6.02□□□□□ -1.45
Sox1P53783 Gm18127-201ENSMUST00000208479 725 ntBASIC6.02□□□□□ -1.45
Sox1P53783 Gm45727-201ENSMUST00000212886 572 ntBASIC6.02□□□□□ -1.45
Sox1P53783 AC161114.1-201ENSMUST00000218223 474 ntBASIC6.02□□□□□ -1.45
Sox1P53783 AC154636.1-201ENSMUST00000223226 126 ntBASIC6.02□□□□□ -1.45
Sox1P53783 Rpl31-ps2-201ENSMUST00000223231 343 ntBASIC6.02□□□□□ -1.45
Sox1P53783 AC154506.1-201ENSMUST00000225178 621 ntBASIC6.02□□□□□ -1.45
Sox1P53783 AC122448.1-201ENSMUST00000226317 772 ntBASIC6.02□□□□□ -1.45
Sox1P53783 AC132112.1-201ENSMUST00000226354 505 ntBASIC6.02□□□□□ -1.45
Sox1P53783 AC139758.1-201ENSMUST00000226573 930 ntBASIC6.02□□□□□ -1.45
Sox1P53783 A630091E08Rik-201ENSMUST00000069035 828 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
Sox1P53783 Vmn1r40-201ENSMUST00000075158 933 ntAPPRIS P1 BASIC6.02□□□□□ -1.45
Sox1P53783 Olfr972-201ENSMUST00000079767 945 ntAPPRIS P1 BASIC6.02□□□□□ -1.45
Sox1P53783 Olfr859-201ENSMUST00000086480 930 ntAPPRIS P1 BASIC6.02□□□□□ -1.45
Sox1P53783 Frem2-201ENSMUST00000091137 12348 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
Sox1P53783 Gm18310-201ENSMUST00000206494 3912 ntBASIC6.02□□□□□ -1.45
Sox1P53783 Pkd1l3-202ENSMUST00000109242 6606 ntAPPRIS ALT2 TSL 1 (best) BASIC6.02□□□□□ -1.45
Sox1P53783 Gm14929-201ENSMUST00000152079 1850 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
Sox1P53783 Gm21284-201ENSMUST00000205532 3736 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
Sox1P53783 Rc3h2-201ENSMUST00000100143 8799 ntAPPRIS P1 TSL 5 BASIC6.02□□□□□ -1.45
Sox1P53783 Pcdh15-217ENSMUST00000134009 3300 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
Sox1P53783 AC122263.1-201ENSMUST00000228636 2805 ntBASIC6.02□□□□□ -1.45
Sox1P53783 Olfr690-203ENSMUST00000216230 2085 ntAPPRIS P1 TSL 5 BASIC6.02□□□□□ -1.45
Sox1P53783 Dclre1c-201ENSMUST00000061852 7075 ntAPPRIS ALT2 TSL 1 (best) BASIC6.02□□□□□ -1.45
Sox1P53783 Zzz3-204ENSMUST00000106103 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC6.02□□□□□ -1.45
Retrieved 100 of 76,532 protein–RNA pairs in 73 ms