Protein–RNA interactions for Protein: E9PWQ3

Col6a3, Collagen, type VI, alpha 3, mousemouse

Predictions only

Length 3,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3E9PWQ3 4930412F09Rik-201ENSMUST00000139006 1017 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
Col6a3E9PWQ3 Gm24138-201ENSMUST00000157572 114 ntBASIC4.1□□□□□ -1.75
Col6a3E9PWQ3 Gm22889-201ENSMUST00000158639 58 ntBASIC4.1□□□□□ -1.75
Col6a3E9PWQ3 1700026F02Rik-205ENSMUST00000212266 787 ntTSL 5 BASIC4.1□□□□□ -1.75
Col6a3E9PWQ3 AC153979.1-201ENSMUST00000219684 242 ntTSL 5 BASIC4.1□□□□□ -1.75
Col6a3E9PWQ3 Olfr1465-201ENSMUST00000080142 924 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
Col6a3E9PWQ3 Mir370-201ENSMUST00000083499 79 ntBASIC4.1□□□□□ -1.75
Col6a3E9PWQ3 AC116797.2-201ENSMUST00000224763 4221 ntBASIC4.1□□□□□ -1.75
Col6a3E9PWQ3 Dcun1d1-212ENSMUST00000198389 3020 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
Col6a3E9PWQ3 Olfr1057-202ENSMUST00000217435 3249 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
Col6a3E9PWQ3 Baz2b-202ENSMUST00000112550 7895 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
Col6a3E9PWQ3 Zcchc7-208ENSMUST00000147272 4251 ntTSL 2 BASIC4.1□□□□□ -1.75
Col6a3E9PWQ3 Fancd2-201ENSMUST00000036340 5512 ntAPPRIS P3 TSL 1 (best) BASIC4.1□□□□□ -1.75
Col6a3E9PWQ3 Olfr987-202ENSMUST00000111598 1418 ntAPPRIS P1 TSL 3 BASIC4.1□□□□□ -1.75
Col6a3E9PWQ3 Olfr1217-204ENSMUST00000216592 3992 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
Col6a3E9PWQ3 Igkv9-129-201ENSMUST00000103308 350 ntAPPRIS ALT2 BASIC4.1□□□□□ -1.75
Col6a3E9PWQ3 Olfr160-201ENSMUST00000104875 930 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
Col6a3E9PWQ3 AC123944.2-201ENSMUST00000215290 382 ntBASIC4.1□□□□□ -1.75
Col6a3E9PWQ3 Olfr948-201ENSMUST00000076516 966 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
Col6a3E9PWQ3 Trappc13-205ENSMUST00000144060 3538 ntAPPRIS ALT1 TSL 1 (best) BASIC4.1□□□□□ -1.75
Col6a3E9PWQ3 AU023762-203ENSMUST00000209897 2179 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
Col6a3E9PWQ3 Olfr536-204ENSMUST00000215340 3938 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
Col6a3E9PWQ3 Ablim1-201ENSMUST00000079360 7152 ntAPPRIS P3 TSL 5 BASIC4.1□□□□□ -1.75
Col6a3E9PWQ3 Rnf24-202ENSMUST00000110194 5944 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
Col6a3E9PWQ3 Zfp568-202ENSMUST00000146074 6867 ntAPPRIS ALT2 TSL 1 (best) BASIC4.1□□□□□ -1.75
Col6a3E9PWQ3 Olfr457-203ENSMUST00000204324 4275 ntAPPRIS P1 TSL 3 BASIC4.1□□□□□ -1.75
Col6a3E9PWQ3 Smgc-201ENSMUST00000088555 2977 ntAPPRIS P2 TSL 1 (best) BASIC4.1□□□□□ -1.75
Col6a3E9PWQ3 Gm14825-201ENSMUST00000113538 701 ntBASIC4.1□□□□□ -1.75
Col6a3E9PWQ3 Gm15870-201ENSMUST00000132657 644 ntTSL 3 BASIC4.1□□□□□ -1.75
Col6a3E9PWQ3 Gm28190-201ENSMUST00000189766 722 ntBASIC4.1□□□□□ -1.75
Col6a3E9PWQ3 Gm37617-201ENSMUST00000194309 159 ntBASIC4.1□□□□□ -1.75
Col6a3E9PWQ3 Gm45240-201ENSMUST00000211437 674 ntBASIC4.1□□□□□ -1.75
Col6a3E9PWQ3 Gm26571-203ENSMUST00000221865 555 ntTSL 2 BASIC4.1□□□□□ -1.75
Col6a3E9PWQ3 Ctsm-202ENSMUST00000223778 1905 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
Col6a3E9PWQ3 Olfr586-203ENSMUST00000213281 5001 ntAPPRIS ALT2 TSL 5 BASIC4.09□□□□□ -1.75
Col6a3E9PWQ3 A530099J19Rik-201ENSMUST00000151029 2764 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
Col6a3E9PWQ3 Sucnr1-201ENSMUST00000029326 1571 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
Col6a3E9PWQ3 Gm44843-201ENSMUST00000208320 1396 ntBASIC4.09□□□□□ -1.75
Col6a3E9PWQ3 Ccdc127-201ENSMUST00000022063 9559 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
Col6a3E9PWQ3 Olfr1260-202ENSMUST00000111512 4226 ntAPPRIS P1 TSL 2 BASIC4.09□□□□□ -1.75
Col6a3E9PWQ3 Olfr1085-203ENSMUST00000214566 5129 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.75
Col6a3E9PWQ3 Gm5460-201ENSMUST00000100719 1903 ntAPPRIS P2 TSL 1 (best) BASIC4.09□□□□□ -1.75
Col6a3E9PWQ3 Senp8-203ENSMUST00000177963 3792 ntAPPRIS P3 TSL 1 (best) BASIC4.09□□□□□ -1.75
Col6a3E9PWQ3 Trav16n-201ENSMUST00000103633 353 ntAPPRIS ALT2 BASIC4.09□□□□□ -1.75
Col6a3E9PWQ3 Gm20456-201ENSMUST00000174690 385 ntTSL 5 BASIC4.09□□□□□ -1.75
Col6a3E9PWQ3 1700042D02Rik-201ENSMUST00000198232 389 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
Col6a3E9PWQ3 Olfr436-ps1-201ENSMUST00000203108 284 ntBASIC4.09□□□□□ -1.75
Col6a3E9PWQ3 Pou2f1-205ENSMUST00000111427 13050 ntAPPRIS ALT2 TSL 2 BASIC4.09□□□□□ -1.75
Col6a3E9PWQ3 Olfr417-203ENSMUST00000220394 6080 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.75
Col6a3E9PWQ3 Abcb5-201ENSMUST00000035515 3876 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
Col6a3E9PWQ3 Vmn1r197-203ENSMUST00000227017 5158 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
Col6a3E9PWQ3 Gm37298-201ENSMUST00000193770 3868 ntBASIC4.09□□□□□ -1.75
Col6a3E9PWQ3 Olfr824-202ENSMUST00000214192 3862 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.75
Col6a3E9PWQ3 Gm11782-201ENSMUST00000131675 2804 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
Col6a3E9PWQ3 Colec10-201ENSMUST00000036737 4587 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
Col6a3E9PWQ3 Olfr93-203ENSMUST00000219235 2929 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.75
Col6a3E9PWQ3 Gm23499-201ENSMUST00000157736 268 ntBASIC4.09□□□□□ -1.76
Col6a3E9PWQ3 Speer4cos-201ENSMUST00000162113 1083 ntTSL 1 (best) BASIC4.09□□□□□ -1.76
Col6a3E9PWQ3 Gm29540-201ENSMUST00000188207 337 ntTSL 3 BASIC4.09□□□□□ -1.76
Col6a3E9PWQ3 1700023G09Rik-202ENSMUST00000194671 308 ntTSL 3 BASIC4.09□□□□□ -1.76
Col6a3E9PWQ3 Olfr908-201ENSMUST00000215139 932 ntAPPRIS P1 BASIC4.09□□□□□ -1.76
Col6a3E9PWQ3 4930469K13Rik-202ENSMUST00000223852 537 ntAPPRIS P5 BASIC4.09□□□□□ -1.76
Col6a3E9PWQ3 Gtpbp8-201ENSMUST00000023348 836 ntTSL 1 (best) BASIC4.09□□□□□ -1.76
Col6a3E9PWQ3 Pcdh15-205ENSMUST00000105429 6719 ntTSL 5 BASIC4.09□□□□□ -1.76
Col6a3E9PWQ3 Exoc4-201ENSMUST00000052266 4824 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.76
Col6a3E9PWQ3 Ccnb3-202ENSMUST00000115752 4554 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.76
Col6a3E9PWQ3 Gm42946-201ENSMUST00000196108 2570 ntBASIC4.09□□□□□ -1.76
Col6a3E9PWQ3 Fgf7-202ENSMUST00000110442 2287 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.76
Col6a3E9PWQ3 Olfr457-202ENSMUST00000203396 4404 ntAPPRIS P1 TSL 3 BASIC4.09□□□□□ -1.76
Col6a3E9PWQ3 4930595M18Rik-201ENSMUST00000080083 2644 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.76
Col6a3E9PWQ3 Csnk1g1-201ENSMUST00000034949 7208 ntAPPRIS P2 TSL 1 (best) BASIC4.09□□□□□ -1.76
Col6a3E9PWQ3 Vmn1r90-204ENSMUST00000226802 7185 ntAPPRIS P2 BASIC4.09□□□□□ -1.76
Col6a3E9PWQ3 Cdc27-203ENSMUST00000106962 3160 ntTSL 5 BASIC4.09□□□□□ -1.76
Col6a3E9PWQ3 Erc1-201ENSMUST00000032279 8356 ntAPPRIS P2 TSL 1 (best) BASIC4.08□□□□□ -1.76
Col6a3E9PWQ3 Vmn1r52-207ENSMUST00000228394 3069 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
Col6a3E9PWQ3 Gm24358-201ENSMUST00000158424 288 ntBASIC4.08□□□□□ -1.76
Col6a3E9PWQ3 Gm8890-202ENSMUST00000177727 465 ntAPPRIS ALT2 TSL 5 BASIC4.08□□□□□ -1.76
Col6a3E9PWQ3 Nutf2-ps2-201ENSMUST00000179225 384 ntBASIC4.08□□□□□ -1.76
Col6a3E9PWQ3 Gm43932-201ENSMUST00000204499 52 ntBASIC4.08□□□□□ -1.76
Col6a3E9PWQ3 Cacna1d-202ENSMUST00000112250 8688 ntAPPRIS P4 TSL 1 (best) BASIC4.08□□□□□ -1.76
Col6a3E9PWQ3 Gm15128-202ENSMUST00000178833 1350 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
Col6a3E9PWQ3 Agl-201ENSMUST00000040603 9625 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
Col6a3E9PWQ3 Bbox1-201ENSMUST00000046233 4030 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
Col6a3E9PWQ3 Gm42986-201ENSMUST00000201618 3385 ntBASIC4.08□□□□□ -1.76
Col6a3E9PWQ3 Zfp638-206ENSMUST00000203324 3822 ntAPPRIS ALT2 TSL 5 BASIC4.08□□□□□ -1.76
Col6a3E9PWQ3 Gm24318-201ENSMUST00000104490 131 ntBASIC4.08□□□□□ -1.76
Col6a3E9PWQ3 Gm12268-201ENSMUST00000118398 442 ntBASIC4.08□□□□□ -1.76
Col6a3E9PWQ3 Gm18940-201ENSMUST00000222518 871 ntBASIC4.08□□□□□ -1.76
Col6a3E9PWQ3 AC098719.1-201ENSMUST00000228920 371 ntBASIC4.08□□□□□ -1.76
Col6a3E9PWQ3 Ndnf-201ENSMUST00000054351 10101 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
Col6a3E9PWQ3 Med12l-202ENSMUST00000040325 10159 ntAPPRIS ALT2 TSL 5 BASIC4.08□□□□□ -1.76
Col6a3E9PWQ3 Gm43881-201ENSMUST00000203051 2530 ntBASIC4.08□□□□□ -1.76
Col6a3E9PWQ3 Olfr1184-202ENSMUST00000216675 3164 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
Col6a3E9PWQ3 Wdfy4-201ENSMUST00000061753 9681 ntAPPRIS P2 TSL 5 BASIC4.08□□□□□ -1.76
Col6a3E9PWQ3 Zfp942-201ENSMUST00000074295 1461 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
Col6a3E9PWQ3 Olfr1226-205ENSMUST00000216445 7046 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
Col6a3E9PWQ3 Olfr992-202ENSMUST00000213749 2150 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
Col6a3E9PWQ3 Zfp229-203ENSMUST00000182603 4315 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
Col6a3E9PWQ3 Tor1aip1-210ENSMUST00000169241 3716 ntAPPRIS ALT2 TSL 3 BASIC4.08□□□□□ -1.76
Col6a3E9PWQ3 Mir7068-201ENSMUST00000183439 74 ntBASIC4.08□□□□□ -1.76
Retrieved 100 of 76,532 protein–RNA pairs in 71.4 ms