Protein–RNA interactions for Protein: P50220

Nkx2-1, Homeobox protein Nkx-2.1, mousemouse

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-1P50220 Gm37544-201ENSMUST00000192803 174 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
Nkx2-1P50220 Gm37340-201ENSMUST00000193124 759 ntTSL 5 BASIC3.96□□□□□ -1.78
Nkx2-1P50220 Gm37635-201ENSMUST00000193129 174 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
Nkx2-1P50220 Gm21809-202ENSMUST00000194072 174 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
Nkx2-1P50220 Trav7d-5-201ENSMUST00000197128 340 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
Nkx2-1P50220 AL645522.1-201ENSMUST00000197692 104 ntBASIC3.96□□□□□ -1.78
Nkx2-1P50220 Igkv12-40-201ENSMUST00000199208 347 ntBASIC3.96□□□□□ -1.78
Nkx2-1P50220 2400006E01Rik-203ENSMUST00000199633 643 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
Nkx2-1P50220 Trav7n-5-201ENSMUST00000199753 340 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
Nkx2-1P50220 Csn1s2a-209ENSMUST00000200322 797 ntAPPRIS ALT2 TSL 2 BASIC3.96□□□□□ -1.78
Nkx2-1P50220 Gm43368-201ENSMUST00000200638 409 ntBASIC3.96□□□□□ -1.78
Nkx2-1P50220 1700065J11Rik-201ENSMUST00000201560 424 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
Nkx2-1P50220 Gm42666-201ENSMUST00000201954 152 ntBASIC3.96□□□□□ -1.78
Nkx2-1P50220 4930595O18Rik-201ENSMUST00000205099 607 ntBASIC3.96□□□□□ -1.78
Nkx2-1P50220 Gm45171-201ENSMUST00000206360 736 ntBASIC3.96□□□□□ -1.78
Nkx2-1P50220 Gm45409-201ENSMUST00000211486 252 ntBASIC3.96□□□□□ -1.78
Nkx2-1P50220 AC162467.1-201ENSMUST00000220254 621 ntBASIC3.96□□□□□ -1.78
Nkx2-1P50220 AC122397.2-201ENSMUST00000227422 686 ntBASIC3.96□□□□□ -1.78
Nkx2-1P50220 C130073F10Rik-201ENSMUST00000051043 913 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
Nkx2-1P50220 Olfr352-201ENSMUST00000065416 948 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
Nkx2-1P50220 Olfr611-201ENSMUST00000078108 972 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
Nkx2-1P50220 Mir449a-201ENSMUST00000083641 91 ntBASIC3.96□□□□□ -1.78
Nkx2-1P50220 Cnot6l-210ENSMUST00000155901 8564 ntAPPRIS P3 TSL 1 (best) BASIC3.96□□□□□ -1.78
Nkx2-1P50220 Ccr9-205ENSMUST00000180093 4239 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
Nkx2-1P50220 1700017N19Rik-206ENSMUST00000190386 1483 ntTSL 5 BASIC3.96□□□□□ -1.78
Nkx2-1P50220 Gm38101-201ENSMUST00000193484 3557 ntBASIC3.96□□□□□ -1.78
Nkx2-1P50220 Gm13919-202ENSMUST00000140238 1552 ntTSL 5 BASIC3.96□□□□□ -1.78
Nkx2-1P50220 6720489N17Rik-202ENSMUST00000201563 2640 ntAPPRIS P2 TSL 1 (best) BASIC3.96□□□□□ -1.78
Nkx2-1P50220 Gm44283-201ENSMUST00000204461 3950 ntBASIC3.96□□□□□ -1.78
Nkx2-1P50220 Dync2h1-204ENSMUST00000140466 14264 ntAPPRIS P2 TSL 5 BASIC3.96□□□□□ -1.78
Nkx2-1P50220 Olfr629-203ENSMUST00000216300 2277 ntAPPRIS P1 TSL 5 BASIC3.96□□□□□ -1.78
Nkx2-1P50220 C130079G13Rik-201ENSMUST00000049476 2789 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
Nkx2-1P50220 Gm13972-201ENSMUST00000153726 3164 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
Nkx2-1P50220 Gm12586-201ENSMUST00000117328 1316 ntBASIC3.95□□□□□ -1.78
Nkx2-1P50220 Vmn1r43-203ENSMUST00000226741 12542 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
Nkx2-1P50220 Olfr1188-202ENSMUST00000217131 1406 ntAPPRIS ALT2 TSL 3 BASIC3.95□□□□□ -1.78
Nkx2-1P50220 Arhgef6-201ENSMUST00000033468 4569 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
Nkx2-1P50220 AC129085.3-201ENSMUST00000225686 1705 ntBASIC3.95□□□□□ -1.78
Nkx2-1P50220 Rnf128-202ENSMUST00000113027 2641 ntTSL 5 BASIC3.95□□□□□ -1.78
Nkx2-1P50220 Spag17-204ENSMUST00000164539 7862 ntAPPRIS P1 TSL 5 BASIC3.95□□□□□ -1.78
Nkx2-1P50220 Adam25-201ENSMUST00000096663 2621 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
Nkx2-1P50220 Gm20139-202ENSMUST00000216041 3888 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
Nkx2-1P50220 Olfr1257-202ENSMUST00000111519 2756 ntAPPRIS P1 TSL 2 BASIC3.95□□□□□ -1.78
Nkx2-1P50220 Gm37323-201ENSMUST00000195771 2773 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
Nkx2-1P50220 Nexn-212ENSMUST00000199470 2392 ntAPPRIS ALT2 TSL 5 BASIC3.95□□□□□ -1.78
Nkx2-1P50220 Olfr1377-203ENSMUST00000216101 1990 ntAPPRIS P1 TSL 3 BASIC3.95□□□□□ -1.78
Nkx2-1P50220 Gm6545-201ENSMUST00000217186 1786 ntBASIC3.95□□□□□ -1.78
Nkx2-1P50220 Gm42736-201ENSMUST00000200723 1353 ntBASIC3.95□□□□□ -1.78
Nkx2-1P50220 4930503E14Rik-201ENSMUST00000100688 1287 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
Nkx2-1P50220 Trav12n-1-201ENSMUST00000103587 344 ntAPPRIS ALT2 BASIC3.95□□□□□ -1.78
Nkx2-1P50220 Trav6n-6-201ENSMUST00000103613 287 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
Nkx2-1P50220 Gm15779-201ENSMUST00000117470 412 ntBASIC3.95□□□□□ -1.78
Nkx2-1P50220 Gm8595-201ENSMUST00000118250 630 ntBASIC3.95□□□□□ -1.78
Nkx2-1P50220 Gm14871-201ENSMUST00000119056 194 ntBASIC3.95□□□□□ -1.78
Nkx2-1P50220 Rpl26-ps5-201ENSMUST00000122220 439 ntBASIC3.95□□□□□ -1.78
Nkx2-1P50220 Gm14582-201ENSMUST00000141697 1189 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
Nkx2-1P50220 Gm16259-201ENSMUST00000145241 553 ntBASIC3.95□□□□□ -1.78
Nkx2-1P50220 Gm17194-201ENSMUST00000164610 348 ntBASIC3.95□□□□□ -1.78
Nkx2-1P50220 Gm3486-201ENSMUST00000169361 883 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
Nkx2-1P50220 Gm4181-201ENSMUST00000170249 898 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
Nkx2-1P50220 Mir3473g-201ENSMUST00000183494 136 ntBASIC3.95□□□□□ -1.78
Nkx2-1P50220 Trav12d-1-202ENSMUST00000183652 344 ntAPPRIS ALT2 BASIC3.95□□□□□ -1.78
Nkx2-1P50220 Mir6418-201ENSMUST00000185075 115 ntBASIC3.95□□□□□ -1.78
Nkx2-1P50220 Gm27427-201ENSMUST00000185134 193 ntBASIC3.95□□□□□ -1.78
Nkx2-1P50220 Gm29159-201ENSMUST00000187969 379 ntBASIC3.95□□□□□ -1.78
Nkx2-1P50220 Gm28103-201ENSMUST00000188392 416 ntTSL 5 BASIC3.95□□□□□ -1.78
Nkx2-1P50220 Gm20776-201ENSMUST00000189940 700 ntBASIC3.95□□□□□ -1.78
Nkx2-1P50220 Gm28137-201ENSMUST00000191478 416 ntTSL 5 BASIC3.95□□□□□ -1.78
Nkx2-1P50220 Gm37473-201ENSMUST00000195079 674 ntTSL 5 BASIC3.95□□□□□ -1.78
Nkx2-1P50220 Gm43574-201ENSMUST00000196226 809 ntTSL 3 BASIC3.95□□□□□ -1.78
Nkx2-1P50220 Gm17935-201ENSMUST00000196649 772 ntBASIC3.95□□□□□ -1.78
Nkx2-1P50220 Gm43476-201ENSMUST00000197873 405 ntBASIC3.95□□□□□ -1.78
Nkx2-1P50220 4930599N24Rik-201ENSMUST00000198822 1003 ntBASIC3.95□□□□□ -1.78
Nkx2-1P50220 Gm43005-201ENSMUST00000199015 648 ntBASIC3.95□□□□□ -1.78
Nkx2-1P50220 Gm43825-201ENSMUST00000199650 734 ntBASIC3.95□□□□□ -1.78
Nkx2-1P50220 Gstm2-ps1-201ENSMUST00000201478 657 ntBASIC3.95□□□□□ -1.78
Nkx2-1P50220 AC122464.1-201ENSMUST00000202789 770 ntBASIC3.95□□□□□ -1.78
Nkx2-1P50220 Vmn1r-ps5-201ENSMUST00000202963 931 ntBASIC3.95□□□□□ -1.78
Nkx2-1P50220 Gm35216-201ENSMUST00000203777 433 ntTSL 2 BASIC3.95□□□□□ -1.78
Nkx2-1P50220 Gm19253-201ENSMUST00000204279 307 ntBASIC3.95□□□□□ -1.78
Nkx2-1P50220 Klrb1b-204ENSMUST00000205130 917 ntAPPRIS ALT2 TSL 1 (best) BASIC3.95□□□□□ -1.78
Nkx2-1P50220 AC161456.1-201ENSMUST00000206771 887 ntBASIC3.95□□□□□ -1.78
Nkx2-1P50220 Gm18468-201ENSMUST00000207321 369 ntBASIC3.95□□□□□ -1.78
Nkx2-1P50220 Gm18470-201ENSMUST00000207467 420 ntBASIC3.95□□□□□ -1.78
Nkx2-1P50220 Gm18465-201ENSMUST00000207468 369 ntBASIC3.95□□□□□ -1.78
Nkx2-1P50220 Gm18464-201ENSMUST00000207803 420 ntBASIC3.95□□□□□ -1.78
Nkx2-1P50220 C030038I04Rik-201ENSMUST00000207840 740 ntBASIC3.95□□□□□ -1.78
Nkx2-1P50220 Gm18458-201ENSMUST00000207908 369 ntBASIC3.95□□□□□ -1.78
Nkx2-1P50220 Gm18461-201ENSMUST00000208421 420 ntBASIC3.95□□□□□ -1.78
Nkx2-1P50220 AC122332.1-201ENSMUST00000214384 285 ntBASIC3.95□□□□□ -1.78
Nkx2-1P50220 2900078I11Rik-201ENSMUST00000214556 999 ntBASIC3.95□□□□□ -1.78
Nkx2-1P50220 AC153932.1-201ENSMUST00000218558 787 ntBASIC3.95□□□□□ -1.78
Nkx2-1P50220 Gm3086-202ENSMUST00000221248 310 ntBASIC3.95□□□□□ -1.78
Nkx2-1P50220 AC154816.2-201ENSMUST00000221918 372 ntTSL 5 BASIC3.95□□□□□ -1.78
Nkx2-1P50220 Gm33958-201ENSMUST00000222879 450 ntTSL 5 BASIC3.95□□□□□ -1.78
Nkx2-1P50220 Gm6474-201ENSMUST00000223250 699 ntBASIC3.95□□□□□ -1.78
Nkx2-1P50220 Gngt1-201ENSMUST00000031673 1183 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
Nkx2-1P50220 2310079G19Rik-201ENSMUST00000052337 881 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
Nkx2-1P50220 Mrgprb8-201ENSMUST00000056676 1123 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
Nkx2-1P50220 n-R5s86-201ENSMUST00000083215 119 ntBASIC3.95□□□□□ -1.78
Retrieved 100 of 76,532 protein–RNA pairs in 69 ms