Protein–RNA interactions for Protein: P18828

Sdc1, Syndecan-1, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc1P18828 Igf1-202ENSMUST00000095360 7052 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.82
Sdc1P18828 Ntrk3-201ENSMUST00000039431 19703 ntAPPRIS P2 TSL 1 (best) BASIC3.65□□□□□ -1.82
Sdc1P18828 Ppef1-201ENSMUST00000071204 2483 ntAPPRIS P1 TSL 2 BASIC3.65□□□□□ -1.82
Sdc1P18828 Gm30524-201ENSMUST00000204271 2300 ntTSL 1 (best) BASIC3.65□□□□□ -1.82
Sdc1P18828 Cul4b-203ENSMUST00000115118 3344 ntAPPRIS P2 TSL 1 (best) BASIC3.65□□□□□ -1.83
Sdc1P18828 Gm10377-201ENSMUST00000100695 899 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
Sdc1P18828 Igkv10-94-201ENSMUST00000103330 347 ntAPPRIS P1 BASIC3.65□□□□□ -1.83
Sdc1P18828 Gm24935-201ENSMUST00000103770 110 ntBASIC3.65□□□□□ -1.83
Sdc1P18828 Gm3676-201ENSMUST00000111869 899 ntAPPRIS P1 TSL 3 BASIC3.65□□□□□ -1.83
Sdc1P18828 Gm3543-201ENSMUST00000111870 899 ntAPPRIS P1 TSL 3 BASIC3.65□□□□□ -1.83
Sdc1P18828 Gm11912-201ENSMUST00000117235 264 ntBASIC3.65□□□□□ -1.83
Sdc1P18828 Gm15180-201ENSMUST00000117745 492 ntBASIC3.65□□□□□ -1.83
Sdc1P18828 Gm15553-201ENSMUST00000118757 430 ntBASIC3.65□□□□□ -1.83
Sdc1P18828 Gm14927-201ENSMUST00000120283 454 ntBASIC3.65□□□□□ -1.83
Sdc1P18828 Gm7879-201ENSMUST00000122204 774 ntAPPRIS P1 BASIC3.65□□□□□ -1.83
Sdc1P18828 Gm12974-201ENSMUST00000129875 333 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
Sdc1P18828 Gm568-201ENSMUST00000135777 506 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
Sdc1P18828 Rgs2-204ENSMUST00000153527 588 ntTSL 2 BASIC3.65□□□□□ -1.83
Sdc1P18828 Gm23896-201ENSMUST00000158109 130 ntBASIC3.65□□□□□ -1.83
Sdc1P18828 Gm25971-201ENSMUST00000158953 286 ntBASIC3.65□□□□□ -1.83
Sdc1P18828 1700058P15Rik-201ENSMUST00000159981 413 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
Sdc1P18828 Gm16102-201ENSMUST00000160955 420 ntBASIC3.65□□□□□ -1.83
Sdc1P18828 Gm3573-201ENSMUST00000168673 898 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.83
Sdc1P18828 Gm10376-202ENSMUST00000169756 900 ntAPPRIS P5 TSL 1 (best) BASIC3.65□□□□□ -1.83
Sdc1P18828 Mir3060-201ENSMUST00000175339 83 ntBASIC3.65□□□□□ -1.83
Sdc1P18828 Gm25525-201ENSMUST00000177701 107 ntBASIC3.65□□□□□ -1.83
Sdc1P18828 Gm26178-201ENSMUST00000177706 107 ntBASIC3.65□□□□□ -1.83
Sdc1P18828 Gm26465-201ENSMUST00000178517 107 ntBASIC3.65□□□□□ -1.83
Sdc1P18828 Gm24317-201ENSMUST00000178536 107 ntBASIC3.65□□□□□ -1.83
Sdc1P18828 Gm25021-201ENSMUST00000179184 107 ntBASIC3.65□□□□□ -1.83
Sdc1P18828 Gm20812-201ENSMUST00000179220 684 ntAPPRIS P1 BASIC3.65□□□□□ -1.83
Sdc1P18828 Gm22995-201ENSMUST00000179670 107 ntBASIC3.65□□□□□ -1.83
Sdc1P18828 Gm24424-201ENSMUST00000179714 107 ntBASIC3.65□□□□□ -1.83
Sdc1P18828 Gm24389-201ENSMUST00000179962 107 ntBASIC3.65□□□□□ -1.83
Sdc1P18828 Gm25672-201ENSMUST00000180111 107 ntBASIC3.65□□□□□ -1.83
Sdc1P18828 Gm21232-201ENSMUST00000182187 1006 ntBASIC3.65□□□□□ -1.83
Sdc1P18828 Gm27039-201ENSMUST00000182438 962 ntBASIC3.65□□□□□ -1.83
Sdc1P18828 Gm28351-201ENSMUST00000186261 559 ntTSL 5 BASIC3.65□□□□□ -1.83
Sdc1P18828 Il19-203ENSMUST00000187410 1135 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.83
Sdc1P18828 Gm29163-201ENSMUST00000188029 107 ntBASIC3.65□□□□□ -1.83
Sdc1P18828 Scgb2b28-ps-201ENSMUST00000188974 337 ntBASIC3.65□□□□□ -1.83
Sdc1P18828 Rpap3-ps1-201ENSMUST00000190928 454 ntBASIC3.65□□□□□ -1.83
Sdc1P18828 Gm37004-201ENSMUST00000193021 683 ntTSL 5 BASIC3.65□□□□□ -1.83
Sdc1P18828 Gm33206-201ENSMUST00000193544 454 ntTSL 2 BASIC3.65□□□□□ -1.83
Sdc1P18828 Gm29755-201ENSMUST00000196976 948 ntBASIC3.65□□□□□ -1.83
Sdc1P18828 Trav7d-5-201ENSMUST00000197128 340 ntAPPRIS P1 BASIC3.65□□□□□ -1.83
Sdc1P18828 Gm8069-201ENSMUST00000197887 154 ntBASIC3.65□□□□□ -1.83
Sdc1P18828 Gm4859-201ENSMUST00000199625 787 ntBASIC3.65□□□□□ -1.83
Sdc1P18828 Trav7n-5-201ENSMUST00000199753 340 ntAPPRIS P1 BASIC3.65□□□□□ -1.83
Sdc1P18828 Gm43456-201ENSMUST00000202519 457 ntBASIC3.65□□□□□ -1.83
Sdc1P18828 Olfr1310-201ENSMUST00000207169 1009 ntAPPRIS P1 BASIC3.65□□□□□ -1.83
Sdc1P18828 Olfr1455-ps1-201ENSMUST00000208608 771 ntBASIC3.65□□□□□ -1.83
Sdc1P18828 Gm6303-201ENSMUST00000210123 471 ntBASIC3.65□□□□□ -1.83
Sdc1P18828 Gm6474-201ENSMUST00000223250 699 ntBASIC3.65□□□□□ -1.83
Sdc1P18828 Gm7040-201ENSMUST00000223271 443 ntBASIC3.65□□□□□ -1.83
Sdc1P18828 AC129085.4-201ENSMUST00000224536 570 ntBASIC3.65□□□□□ -1.83
Sdc1P18828 AC133598.4-202ENSMUST00000225267 469 ntBASIC3.65□□□□□ -1.83
Sdc1P18828 Gm5215-201ENSMUST00000054380 405 ntBASIC3.65□□□□□ -1.83
Sdc1P18828 Skint10-202ENSMUST00000068851 493 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
Sdc1P18828 Olfr68-201ENSMUST00000072513 948 ntAPPRIS P1 BASIC3.65□□□□□ -1.83
Sdc1P18828 Olfr671-201ENSMUST00000078710 942 ntAPPRIS P1 BASIC3.65□□□□□ -1.83
Sdc1P18828 mt-Nd1-201ENSMUST00000082392 957 ntAPPRIS P1 BASIC3.65□□□□□ -1.83
Sdc1P18828 Gm22423-201ENSMUST00000082861 184 ntBASIC3.65□□□□□ -1.83
Sdc1P18828 Gm25739-201ENSMUST00000082886 107 ntBASIC3.65□□□□□ -1.83
Sdc1P18828 n-R5s204-201ENSMUST00000082972 119 ntBASIC3.65□□□□□ -1.83
Sdc1P18828 Gm23815-201ENSMUST00000083231 107 ntBASIC3.65□□□□□ -1.83
Sdc1P18828 Spata22-202ENSMUST00000092926 1274 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
Sdc1P18828 Gm23520-201ENSMUST00000093736 107 ntBASIC3.65□□□□□ -1.83
Sdc1P18828 Rpl31-ps17-201ENSMUST00000097040 378 ntBASIC3.65□□□□□ -1.83
Sdc1P18828 Abi3bp-204ENSMUST00000171000 3877 ntAPPRIS ALT2 TSL 1 (best) BASIC3.65□□□□□ -1.83
Sdc1P18828 Vmn1r215-202ENSMUST00000228092 2790 ntAPPRIS P1 BASIC3.65□□□□□ -1.83
Sdc1P18828 Vmn1r42-202ENSMUST00000226436 4045 ntAPPRIS P1 BASIC3.65□□□□□ -1.83
Sdc1P18828 Olfr1356-202ENSMUST00000205100 3023 ntAPPRIS P1 TSL 2 BASIC3.65□□□□□ -1.83
Sdc1P18828 Olfr1249-202ENSMUST00000216124 3047 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.83
Sdc1P18828 Elf1-202ENSMUST00000110835 3888 ntAPPRIS P2 TSL 1 (best) BASIC3.65□□□□□ -1.83
Sdc1P18828 Ankar-201ENSMUST00000053499 4571 ntAPPRIS P3 TSL 1 (best) BASIC3.65□□□□□ -1.83
Sdc1P18828 Vmn2r19-201ENSMUST00000073948 2565 ntAPPRIS P1 TSL 5 BASIC3.64□□□□□ -1.83
Sdc1P18828 Gm10256-201ENSMUST00000179404 1358 ntAPPRIS P1 TSL 5 BASIC3.64□□□□□ -1.83
Sdc1P18828 Gm7451-201ENSMUST00000208382 1392 ntBASIC3.64□□□□□ -1.83
Sdc1P18828 Nat2-201ENSMUST00000093470 1396 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
Sdc1P18828 Gm7957-201ENSMUST00000207404 2602 ntBASIC3.64□□□□□ -1.83
Sdc1P18828 Ptprz1-201ENSMUST00000090568 8068 ntAPPRIS P3 TSL 1 (best) BASIC3.64□□□□□ -1.83
Sdc1P18828 Synpr-207ENSMUST00000223583 3362 ntBASIC3.64□□□□□ -1.83
Sdc1P18828 Olfr711-201ENSMUST00000051715 3035 ntAPPRIS P1 TSL 2 BASIC3.64□□□□□ -1.83
Sdc1P18828 Gm42876-201ENSMUST00000196989 3215 ntBASIC3.64□□□□□ -1.83
Sdc1P18828 Gm29293-201ENSMUST00000189416 2188 ntBASIC3.64□□□□□ -1.83
Sdc1P18828 Trav8-1-201ENSMUST00000103643 328 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
Sdc1P18828 Gm15058-201ENSMUST00000117689 458 ntBASIC3.64□□□□□ -1.83
Sdc1P18828 Ifna-ps1-201ENSMUST00000119856 555 ntBASIC3.64□□□□□ -1.83
Sdc1P18828 Gm12734-201ENSMUST00000120228 948 ntBASIC3.64□□□□□ -1.83
Sdc1P18828 Vmn1r-ps135-201ENSMUST00000120909 595 ntBASIC3.64□□□□□ -1.83
Sdc1P18828 Rrm2b-203ENSMUST00000137636 900 ntTSL 5 BASIC3.64□□□□□ -1.83
Sdc1P18828 Gm13189-201ENSMUST00000138462 252 ntTSL 3 BASIC3.64□□□□□ -1.83
Sdc1P18828 Gm13211-201ENSMUST00000141649 697 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
Sdc1P18828 Gm14618-201ENSMUST00000149377 740 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
Sdc1P18828 Gm13617-201ENSMUST00000155350 675 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
Sdc1P18828 Gm26001-201ENSMUST00000157989 103 ntBASIC3.64□□□□□ -1.83
Sdc1P18828 Gm7609-204ENSMUST00000161424 461 ntBASIC3.64□□□□□ -1.83
Sdc1P18828 Gm10269-201ENSMUST00000165229 372 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
Sdc1P18828 BC050972-202ENSMUST00000169153 467 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
Retrieved 100 of 76,532 protein–RNA pairs in 76.5 ms