Protein–RNA interactions for Protein: Q8CFK2

Brf1, Transcription factor IIIB 90 kDa subunit, mousemouse

Predictions only

Length 676 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brf1Q8CFK2 Zfp934-203ENSMUST00000220648 2439 ntTSL 5 BASIC5.93□□□□□ -1.46
Brf1Q8CFK2 Igkv3-2-201ENSMUST00000103403 378 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
Brf1Q8CFK2 Gm2348-201ENSMUST00000108782 300 ntBASIC5.93□□□□□ -1.46
Brf1Q8CFK2 Gm4596-201ENSMUST00000117197 442 ntBASIC5.93□□□□□ -1.46
Brf1Q8CFK2 Gm13471-201ENSMUST00000122057 433 ntBASIC5.93□□□□□ -1.46
Brf1Q8CFK2 Gm16254-201ENSMUST00000131528 730 ntBASIC5.93□□□□□ -1.46
Brf1Q8CFK2 Gm15860-202ENSMUST00000137257 506 ntTSL 3 BASIC5.93□□□□□ -1.46
Brf1Q8CFK2 Gm16259-201ENSMUST00000145241 553 ntBASIC5.93□□□□□ -1.46
Brf1Q8CFK2 Gm24444-201ENSMUST00000157244 308 ntBASIC5.93□□□□□ -1.46
Brf1Q8CFK2 Hsd11b1-203ENSMUST00000160929 1256 ntAPPRIS ALT2 TSL 1 (best) BASIC5.93□□□□□ -1.46
Brf1Q8CFK2 Dnaja1-ps-201ENSMUST00000162103 642 ntBASIC5.93□□□□□ -1.46
Brf1Q8CFK2 Gng2-206ENSMUST00000162425 393 ntAPPRIS P1 TSL 3 BASIC5.93□□□□□ -1.46
Brf1Q8CFK2 Gm17472-201ENSMUST00000167638 352 ntAPPRIS P1 TSL 5 BASIC5.93□□□□□ -1.46
Brf1Q8CFK2 Gm9457-201ENSMUST00000180176 372 ntBASIC5.93□□□□□ -1.46
Brf1Q8CFK2 4930509E16Rik-201ENSMUST00000181405 1191 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
Brf1Q8CFK2 Gm26933-201ENSMUST00000182320 827 ntBASIC5.93□□□□□ -1.46
Brf1Q8CFK2 Gm29554-201ENSMUST00000187922 821 ntAPPRIS P1 TSL 5 BASIC5.93□□□□□ -1.46
Brf1Q8CFK2 Gm37193-201ENSMUST00000193087 513 ntBASIC5.93□□□□□ -1.46
Brf1Q8CFK2 Gm37030-201ENSMUST00000194254 295 ntBASIC5.93□□□□□ -1.46
Brf1Q8CFK2 Gm37659-201ENSMUST00000194574 111 ntBASIC5.93□□□□□ -1.46
Brf1Q8CFK2 Olfr529-ps1-201ENSMUST00000211097 928 ntBASIC5.93□□□□□ -1.46
Brf1Q8CFK2 Gm21320-201ENSMUST00000211875 861 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
Brf1Q8CFK2 AC160635.2-201ENSMUST00000216368 734 ntTSL 5 BASIC5.93□□□□□ -1.46
Brf1Q8CFK2 AC174776.1-201ENSMUST00000221509 405 ntBASIC5.93□□□□□ -1.46
Brf1Q8CFK2 AC174776.2-201ENSMUST00000222561 405 ntBASIC5.93□□□□□ -1.46
Brf1Q8CFK2 AC154738.2-201ENSMUST00000227403 1110 ntBASIC5.93□□□□□ -1.46
Brf1Q8CFK2 Olfr1020-201ENSMUST00000055840 1079 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
Brf1Q8CFK2 4930504O13Rik-201ENSMUST00000064614 549 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
Brf1Q8CFK2 Vmn1r33-201ENSMUST00000079678 1036 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
Brf1Q8CFK2 Gm25004-201ENSMUST00000083811 161 ntBASIC5.93□□□□□ -1.46
Brf1Q8CFK2 Pramef25-201ENSMUST00000105766 1684 ntAPPRIS P1 TSL 5 BASIC5.93□□□□□ -1.46
Brf1Q8CFK2 Orc3-202ENSMUST00000108142 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC5.93□□□□□ -1.46
Brf1Q8CFK2 Lpp-202ENSMUST00000078988 15440 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
Brf1Q8CFK2 Olfr183-204ENSMUST00000214831 1906 ntAPPRIS P1 TSL 5 BASIC5.93□□□□□ -1.46
Brf1Q8CFK2 Slc15a2-201ENSMUST00000023616 3993 ntAPPRIS P2 TSL 1 (best) BASIC5.93□□□□□ -1.46
Brf1Q8CFK2 Slco1a1-201ENSMUST00000042119 3395 ntAPPRIS P2 TSL 1 (best) BASIC5.93□□□□□ -1.46
Brf1Q8CFK2 Gm43369-201ENSMUST00000196373 1552 ntBASIC5.93□□□□□ -1.46
Brf1Q8CFK2 AC169038.1-201ENSMUST00000227378 1352 ntBASIC5.93□□□□□ -1.46
Brf1Q8CFK2 2310057J18Rik-202ENSMUST00000140558 1445 ntTSL 5 BASIC5.92□□□□□ -1.46
Brf1Q8CFK2 Cnot4-203ENSMUST00000114993 3473 ntAPPRIS P4 TSL 1 (best) BASIC5.92□□□□□ -1.46
Brf1Q8CFK2 Pdc-202ENSMUST00000185698 3335 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
Brf1Q8CFK2 Gm43784-201ENSMUST00000202922 2436 ntBASIC5.92□□□□□ -1.46
Brf1Q8CFK2 Postn-204ENSMUST00000117373 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC5.92□□□□□ -1.46
Brf1Q8CFK2 Mir879-201ENSMUST00000104703 76 ntBASIC5.92□□□□□ -1.46
Brf1Q8CFK2 Gm15193-201ENSMUST00000120224 865 ntBASIC5.92□□□□□ -1.46
Brf1Q8CFK2 Vmn1r-ps100-201ENSMUST00000120610 867 ntBASIC5.92□□□□□ -1.46
Brf1Q8CFK2 Gm12082-201ENSMUST00000138164 600 ntTSL 3 BASIC5.92□□□□□ -1.46
Brf1Q8CFK2 Gm24198-201ENSMUST00000157812 108 ntBASIC5.92□□□□□ -1.46
Brf1Q8CFK2 Gm23546-201ENSMUST00000158211 137 ntBASIC5.92□□□□□ -1.46
Brf1Q8CFK2 Gm4617-201ENSMUST00000178993 331 ntBASIC5.92□□□□□ -1.46
Brf1Q8CFK2 Gm27551-201ENSMUST00000184258 77 ntBASIC5.92□□□□□ -1.46
Brf1Q8CFK2 Gm5511-201ENSMUST00000189380 802 ntBASIC5.92□□□□□ -1.46
Brf1Q8CFK2 Gm6445-201ENSMUST00000189515 1112 ntBASIC5.92□□□□□ -1.46
Brf1Q8CFK2 Gm43685-201ENSMUST00000198876 706 ntTSL 3 BASIC5.92□□□□□ -1.46
Brf1Q8CFK2 Olfr192-202ENSMUST00000205727 1141 ntAPPRIS P1 TSL 2 BASIC5.92□□□□□ -1.46
Brf1Q8CFK2 Gm45228-201ENSMUST00000206585 352 ntBASIC5.92□□□□□ -1.46
Brf1Q8CFK2 Gm31786-202ENSMUST00000212428 676 ntTSL 3 BASIC5.92□□□□□ -1.46
Brf1Q8CFK2 Gm19137-201ENSMUST00000213790 1164 ntBASIC5.92□□□□□ -1.46
Brf1Q8CFK2 AC154623.1-201ENSMUST00000224348 805 ntBASIC5.92□□□□□ -1.46
Brf1Q8CFK2 AC150560.3-201ENSMUST00000227442 455 ntBASIC5.92□□□□□ -1.46
Brf1Q8CFK2 AC125539.2-202ENSMUST00000227983 587 ntBASIC5.92□□□□□ -1.46
Brf1Q8CFK2 AC125539.2-201ENSMUST00000228339 753 ntBASIC5.92□□□□□ -1.46
Brf1Q8CFK2 Olfr1205-201ENSMUST00000076438 924 ntAPPRIS P1 BASIC5.92□□□□□ -1.46
Brf1Q8CFK2 Gm5185-201ENSMUST00000080271 619 ntBASIC5.92□□□□□ -1.46
Brf1Q8CFK2 Snord15b-201ENSMUST00000083032 145 ntBASIC5.92□□□□□ -1.46
Brf1Q8CFK2 Akr1e1-201ENSMUST00000091848 3463 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
Brf1Q8CFK2 Gm45415-201ENSMUST00000209644 2074 ntBASIC5.92□□□□□ -1.46
Brf1Q8CFK2 Clk4-203ENSMUST00000109113 1627 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
Brf1Q8CFK2 Mtm1-213ENSMUST00000171933 3488 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
Brf1Q8CFK2 Gm14326-204ENSMUST00000178829 1665 ntAPPRIS P1 TSL 5 BASIC5.91□□□□□ -1.46
Brf1Q8CFK2 Zfp184-205ENSMUST00000176511 2703 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
Brf1Q8CFK2 Kera-201ENSMUST00000105286 2280 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
Brf1Q8CFK2 Adam5-205ENSMUST00000209935 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC5.91□□□□□ -1.46
Brf1Q8CFK2 Gm44535-201ENSMUST00000208889 3136 ntBASIC5.91□□□□□ -1.46
Brf1Q8CFK2 Slc39a12-202ENSMUST00000114731 2648 ntAPPRIS ALT2 TSL 5 BASIC5.91□□□□□ -1.46
Brf1Q8CFK2 Gm17791-201ENSMUST00000185660 1501 ntBASIC5.91□□□□□ -1.46
Brf1Q8CFK2 AC122357.1-201ENSMUST00000221652 1515 ntBASIC5.91□□□□□ -1.46
Brf1Q8CFK2 AA792892-201ENSMUST00000097477 1842 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
Brf1Q8CFK2 Scn9a-207ENSMUST00000169900 7497 ntAPPRIS ALT2 TSL 5 BASIC5.91□□□□□ -1.46
Brf1Q8CFK2 Gm11631-201ENSMUST00000119220 156 ntBASIC5.91□□□□□ -1.46
Brf1Q8CFK2 Gm12820-201ENSMUST00000119233 342 ntBASIC5.91□□□□□ -1.46
Brf1Q8CFK2 Mup-ps21-201ENSMUST00000119998 448 ntBASIC5.91□□□□□ -1.46
Brf1Q8CFK2 Olfr1035-ps1-201ENSMUST00000120109 966 ntBASIC5.91□□□□□ -1.46
Brf1Q8CFK2 Gm9435-201ENSMUST00000120379 877 ntBASIC5.91□□□□□ -1.46
Brf1Q8CFK2 Gm14065-201ENSMUST00000120848 585 ntBASIC5.91□□□□□ -1.46
Brf1Q8CFK2 Gm16345-201ENSMUST00000146065 158 ntBASIC5.91□□□□□ -1.46
Brf1Q8CFK2 Gm24931-201ENSMUST00000158324 107 ntBASIC5.91□□□□□ -1.46
Brf1Q8CFK2 Obox3-ps8-201ENSMUST00000177182 960 ntBASIC5.91□□□□□ -1.46
Brf1Q8CFK2 Gm24969-201ENSMUST00000180331 79 ntBASIC5.91□□□□□ -1.46
Brf1Q8CFK2 Gm29596-201ENSMUST00000185710 385 ntBASIC5.91□□□□□ -1.46
Brf1Q8CFK2 4930519F24Rik-201ENSMUST00000185764 579 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
Brf1Q8CFK2 Gm37558-201ENSMUST00000193684 2983 ntBASIC5.91□□□□□ -1.46
Brf1Q8CFK2 Gm43700-201ENSMUST00000200967 316 ntTSL 5 BASIC5.91□□□□□ -1.46
Brf1Q8CFK2 Gm5581-202ENSMUST00000204992 714 ntTSL 3 BASIC5.91□□□□□ -1.46
Brf1Q8CFK2 Gm32536-201ENSMUST00000205209 445 ntBASIC5.91□□□□□ -1.46
Brf1Q8CFK2 Olfr185-ps1-201ENSMUST00000205894 881 ntBASIC5.91□□□□□ -1.46
Brf1Q8CFK2 Snhg1-207ENSMUST00000205909 709 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
Brf1Q8CFK2 Gm44648-201ENSMUST00000208267 329 ntBASIC5.91□□□□□ -1.46
Brf1Q8CFK2 Gm44857-201ENSMUST00000208331 196 ntBASIC5.91□□□□□ -1.46
Brf1Q8CFK2 Gm6657-204ENSMUST00000211288 1091 ntAPPRIS P5 TSL 5 BASIC5.91□□□□□ -1.46
Retrieved 100 of 76,532 protein–RNA pairs in 76.2 ms