Protein–RNA interactions for Protein: P53783

Sox1, Transcription factor SOX-1, mousemouse

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox1P53783 Spire1-202ENSMUST00000082243 4950 ntAPPRIS ALT2 TSL 1 (best) BASIC6.09□□□□□ -1.44
Sox1P53783 Trove2-202ENSMUST00000159879 8738 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.44
Sox1P53783 Tnip3-201ENSMUST00000114236 3769 ntAPPRIS P2 TSL 1 (best) BASIC6.09□□□□□ -1.44
Sox1P53783 Ino80d-206ENSMUST00000172416 13438 ntTSL 5 BASIC6.09□□□□□ -1.44
Sox1P53783 Olfr720-204ENSMUST00000217642 4832 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.44
Sox1P53783 Gm19368-201ENSMUST00000221258 4424 ntBASIC6.09□□□□□ -1.44
Sox1P53783 Lmo3-204ENSMUST00000162772 3664 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.44
Sox1P53783 Wdr66-206ENSMUST00000163092 4009 ntTSL 5 BASIC6.09□□□□□ -1.44
Sox1P53783 Rfx3-201ENSMUST00000046898 4274 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
Sox1P53783 AC129085.2-201ENSMUST00000223763 2800 ntBASIC6.08□□□□□ -1.44
Sox1P53783 Zfp607a-202ENSMUST00000205534 3511 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Sox1P53783 Olfr1389-203ENSMUST00000217595 3549 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
Sox1P53783 C530050E15Rik-201ENSMUST00000181373 3837 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
Sox1P53783 Scyl3-203ENSMUST00000161908 3718 ntAPPRIS ALT2 TSL 1 (best) BASIC6.08□□□□□ -1.44
Sox1P53783 Gm17094-201ENSMUST00000169881 3334 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
Sox1P53783 Bivm-201ENSMUST00000035991 3313 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Sox1P53783 Abca4-207ENSMUST00000141135 3606 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
Sox1P53783 Olfr57-202ENSMUST00000203906 1647 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
Sox1P53783 Btla-201ENSMUST00000063654 3235 ntAPPRIS P4 TSL 1 (best) BASIC6.08□□□□□ -1.44
Sox1P53783 Sp110-201ENSMUST00000093508 1921 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Sox1P53783 Gm9733-201ENSMUST00000108361 618 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Sox1P53783 4933413L06Rik-202ENSMUST00000111588 922 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
Sox1P53783 Mir669g-201ENSMUST00000116809 123 ntBASIC6.08□□□□□ -1.44
Sox1P53783 Gm23879-201ENSMUST00000116874 126 ntBASIC6.08□□□□□ -1.44
Sox1P53783 Rbpsuh-ps1-201ENSMUST00000119456 1006 ntBASIC6.08□□□□□ -1.44
Sox1P53783 Gm14362-201ENSMUST00000121679 273 ntBASIC6.08□□□□□ -1.44
Sox1P53783 Rpl26-ps5-201ENSMUST00000122220 439 ntBASIC6.08□□□□□ -1.44
Sox1P53783 Gm12974-201ENSMUST00000129875 333 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
Sox1P53783 Rab7b-203ENSMUST00000129905 476 ntTSL 2 BASIC6.08□□□□□ -1.44
Sox1P53783 Gm15254-201ENSMUST00000149567 273 ntBASIC6.08□□□□□ -1.44
Sox1P53783 Gm8121-201ENSMUST00000153583 499 ntBASIC6.08□□□□□ -1.44
Sox1P53783 Gm22534-201ENSMUST00000158173 104 ntBASIC6.08□□□□□ -1.44
Sox1P53783 Gm6061-201ENSMUST00000175860 492 ntBASIC6.08□□□□□ -1.44
Sox1P53783 Gm27875-201ENSMUST00000184425 123 ntBASIC6.08□□□□□ -1.44
Sox1P53783 Gm27226-201ENSMUST00000184676 511 ntTSL 2 BASIC6.08□□□□□ -1.44
Sox1P53783 Gm17934-201ENSMUST00000192818 422 ntBASIC6.08□□□□□ -1.44
Sox1P53783 Gm8823-201ENSMUST00000193158 433 ntBASIC6.08□□□□□ -1.44
Sox1P53783 Gm37591-201ENSMUST00000193283 650 ntTSL 3 BASIC6.08□□□□□ -1.44
Sox1P53783 Gm20162-201ENSMUST00000193629 871 ntBASIC6.08□□□□□ -1.44
Sox1P53783 Gm37418-201ENSMUST00000195031 274 ntBASIC6.08□□□□□ -1.44
Sox1P53783 Gm43109-201ENSMUST00000198269 753 ntTSL 3 BASIC6.08□□□□□ -1.44
Sox1P53783 Gm44409-201ENSMUST00000198810 166 ntBASIC6.08□□□□□ -1.44
Sox1P53783 Gm44718-201ENSMUST00000206886 359 ntBASIC6.08□□□□□ -1.44
Sox1P53783 Gm45157-201ENSMUST00000208729 401 ntBASIC6.08□□□□□ -1.44
Sox1P53783 Gm45868-201ENSMUST00000210247 473 ntTSL 3 BASIC6.08□□□□□ -1.44
Sox1P53783 Gm20786-201ENSMUST00000212649 436 ntBASIC6.08□□□□□ -1.44
Sox1P53783 AC154527.1-201ENSMUST00000225809 242 ntBASIC6.08□□□□□ -1.44
Sox1P53783 AC154738.7-201ENSMUST00000228606 579 ntBASIC6.08□□□□□ -1.44
Sox1P53783 Magea6-201ENSMUST00000076986 1201 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Sox1P53783 Xlr5c-201ENSMUST00000088450 540 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
Sox1P53783 B530045E10Rik-202ENSMUST00000189035 3138 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
Sox1P53783 Gm15228-201ENSMUST00000142044 3440 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
Sox1P53783 Gm43201-201ENSMUST00000195925 3416 ntBASIC6.08□□□□□ -1.44
Sox1P53783 AC139941.2-201ENSMUST00000221565 1824 ntBASIC6.08□□□□□ -1.44
Sox1P53783 Trrap-201ENSMUST00000038980 12344 ntAPPRIS ALT2 TSL 5 BASIC6.08□□□□□ -1.44
Sox1P53783 Gm5431-202ENSMUST00000109210 2971 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
Sox1P53783 Gm38168-201ENSMUST00000191717 1493 ntTSL 5 BASIC6.08□□□□□ -1.44
Sox1P53783 Gm37572-202ENSMUST00000194043 1493 ntTSL 5 BASIC6.08□□□□□ -1.44
Sox1P53783 Ppargc1a-203ENSMUST00000132734 6464 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Sox1P53783 Vmn1r54-202ENSMUST00000226921 3234 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
Sox1P53783 Uevld-201ENSMUST00000094398 4616 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Sox1P53783 Gm38124-201ENSMUST00000191710 2581 ntBASIC6.08□□□□□ -1.44
Sox1P53783 Olfr1505-203ENSMUST00000216835 3685 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
Sox1P53783 Gm16513-201ENSMUST00000101023 2832 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
Sox1P53783 Vmn1r6-204ENSMUST00000227188 8185 ntAPPRIS ALT2 BASIC6.07□□□□□ -1.44
Sox1P53783 Nxt2-204ENSMUST00000112916 2532 ntTSL 3 BASIC6.07□□□□□ -1.44
Sox1P53783 Meis1-208ENSMUST00000177417 5308 ntTSL 5 BASIC6.07□□□□□ -1.44
Sox1P53783 Gm21051-201ENSMUST00000221757 1688 ntBASIC6.07□□□□□ -1.44
Sox1P53783 AC156636.1-201ENSMUST00000218639 2229 ntBASIC6.07□□□□□ -1.44
Sox1P53783 Omd-202ENSMUST00000221170 2249 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
Sox1P53783 Scd4-201ENSMUST00000058856 3306 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
Sox1P53783 Olfr657-202ENSMUST00000213297 1948 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
Sox1P53783 Nsun6-202ENSMUST00000076435 3042 ntAPPRIS P3 TSL 1 (best) BASIC6.07□□□□□ -1.44
Sox1P53783 Gm28201-201ENSMUST00000189989 2166 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
Sox1P53783 C1s2-202ENSMUST00000218020 2662 ntAPPRIS P2 TSL 1 (best) BASIC6.07□□□□□ -1.44
Sox1P53783 C1s2-201ENSMUST00000068797 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC6.07□□□□□ -1.44
Sox1P53783 Dctn4-201ENSMUST00000025505 3738 ntAPPRIS P2 TSL 1 (best) BASIC6.07□□□□□ -1.44
Sox1P53783 AC124183.1-201ENSMUST00000222367 2135 ntBASIC6.07□□□□□ -1.44
Sox1P53783 Lilra6-201ENSMUST00000038176 2103 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
Sox1P53783 Zfp946-204ENSMUST00000167740 1572 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
Sox1P53783 Gm43209-201ENSMUST00000198949 1588 ntBASIC6.07□□□□□ -1.44
Sox1P53783 Adam39-201ENSMUST00000066814 2636 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
Sox1P53783 4930595M18Rik-201ENSMUST00000080083 2644 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
Sox1P53783 Gm20768-201ENSMUST00000199527 2338 ntBASIC6.07□□□□□ -1.44
Sox1P53783 Gm31822-201ENSMUST00000216096 2572 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
Sox1P53783 Xpnpep3-203ENSMUST00000163754 5383 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
Sox1P53783 Gm14711-201ENSMUST00000117056 217 ntBASIC6.07□□□□□ -1.44
Sox1P53783 Serpinb1-ps1-201ENSMUST00000118548 586 ntBASIC6.07□□□□□ -1.44
Sox1P53783 1700123O12Rik-204ENSMUST00000146783 577 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
Sox1P53783 Gm12694-201ENSMUST00000149367 748 ntTSL 3 BASIC6.07□□□□□ -1.44
Sox1P53783 Gm14707-201ENSMUST00000152793 398 ntTSL 5 BASIC6.07□□□□□ -1.44
Sox1P53783 Gm13775-201ENSMUST00000153865 751 ntTSL 3 BASIC6.07□□□□□ -1.44
Sox1P53783 Gm23171-201ENSMUST00000157159 264 ntBASIC6.07□□□□□ -1.44
Sox1P53783 Gm17511-201ENSMUST00000172206 342 ntBASIC6.07□□□□□ -1.44
Sox1P53783 Gm4134-201ENSMUST00000173244 563 ntBASIC6.07□□□□□ -1.44
Sox1P53783 Gm20523-201ENSMUST00000174340 1124 ntBASIC6.07□□□□□ -1.44
Sox1P53783 Gm5709-201ENSMUST00000177879 1165 ntBASIC6.07□□□□□ -1.44
Sox1P53783 Gm8356-203ENSMUST00000178896 615 ntTSL 5 BASIC6.07□□□□□ -1.44
Sox1P53783 Rian-203ENSMUST00000181527 989 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
Sox1P53783 Gm28665-201ENSMUST00000189269 670 ntBASIC6.07□□□□□ -1.44
Retrieved 100 of 76,532 protein–RNA pairs in 74 ms