Protein–RNA interactions for Protein: P28481

Col2a1, Collagen alpha-1(II) chain, mousemouse

Predictions only

Length 1,487 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col2a1P28481 Serpina3l-ps-201ENSMUST00000163975 1264 ntBASIC4.87□□□□□ -1.63
Col2a1P28481 Zfp456-202ENSMUST00000172266 679 ntTSL 3 BASIC4.87□□□□□ -1.63
Col2a1P28481 1700027A15Rik-203ENSMUST00000188793 423 ntTSL 3 BASIC4.87□□□□□ -1.63
Col2a1P28481 Gm37898-201ENSMUST00000193781 174 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
Col2a1P28481 Gm43586-201ENSMUST00000195948 310 ntBASIC4.87□□□□□ -1.63
Col2a1P28481 Olfr1473-ps1-201ENSMUST00000207135 958 ntBASIC4.87□□□□□ -1.63
Col2a1P28481 AC153897.1-201ENSMUST00000213510 470 ntTSL 3 BASIC4.87□□□□□ -1.63
Col2a1P28481 AC161424.1-202ENSMUST00000213570 767 ntTSL 3 BASIC4.87□□□□□ -1.63
Col2a1P28481 Gm34609-201ENSMUST00000219284 789 ntTSL 5 BASIC4.87□□□□□ -1.63
Col2a1P28481 AC165283.1-201ENSMUST00000223390 307 ntBASIC4.87□□□□□ -1.63
Col2a1P28481 Vmn1r36-202ENSMUST00000226635 918 ntAPPRIS P2 BASIC4.87□□□□□ -1.63
Col2a1P28481 Olfr1242-201ENSMUST00000099777 1053 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
Col2a1P28481 Olfr633-202ENSMUST00000216006 3915 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
Col2a1P28481 Btbd35f7-201ENSMUST00000105007 1960 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
Col2a1P28481 Ddx60-202ENSMUST00000093485 5989 ntAPPRIS ALT2 TSL 5 BASIC4.87□□□□□ -1.63
Col2a1P28481 A230057D06Rik-203ENSMUST00000208953 3357 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
Col2a1P28481 Gm42717-201ENSMUST00000197309 3463 ntBASIC4.87□□□□□ -1.63
Col2a1P28481 4930544M13Rik-202ENSMUST00000181553 1403 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
Col2a1P28481 Tfpi2-201ENSMUST00000031674 1530 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
Col2a1P28481 Thoc1-201ENSMUST00000025137 3855 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
Col2a1P28481 Olfr1387-202ENSMUST00000214541 4840 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
Col2a1P28481 Acer3-201ENSMUST00000033020 11340 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
Col2a1P28481 Gm11782-201ENSMUST00000131675 2804 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
Col2a1P28481 Olfr951-202ENSMUST00000216107 1947 ntAPPRIS ALT2 TSL 3 BASIC4.86□□□□□ -1.63
Col2a1P28481 Serpinb9g-201ENSMUST00000081927 1927 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
Col2a1P28481 Lair1-201ENSMUST00000068865 6828 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
Col2a1P28481 Zfp131-202ENSMUST00000178271 2966 ntAPPRIS P3 TSL 1 (best) BASIC4.86□□□□□ -1.63
Col2a1P28481 Rgs5-201ENSMUST00000027997 4096 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
Col2a1P28481 Vmn1r52-207ENSMUST00000228394 3069 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
Col2a1P28481 Cp-203ENSMUST00000108325 3183 ntAPPRIS ALT2 TSL 5 BASIC4.86□□□□□ -1.63
Col2a1P28481 Gm43200-201ENSMUST00000200385 2161 ntBASIC4.86□□□□□ -1.63
Col2a1P28481 Olfr813-202ENSMUST00000204622 2410 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
Col2a1P28481 Gm45517-201ENSMUST00000209973 2468 ntBASIC4.86□□□□□ -1.63
Col2a1P28481 Gm15263-201ENSMUST00000121556 642 ntBASIC4.86□□□□□ -1.63
Col2a1P28481 Gm25104-201ENSMUST00000122476 163 ntBASIC4.86□□□□□ -1.63
Col2a1P28481 Gm4487-201ENSMUST00000150617 442 ntBASIC4.86□□□□□ -1.63
Col2a1P28481 Mir6345-201ENSMUST00000184286 128 ntBASIC4.86□□□□□ -1.63
Col2a1P28481 Gm21803-201ENSMUST00000188897 693 ntBASIC4.86□□□□□ -1.63
Col2a1P28481 Gm43649-201ENSMUST00000196596 391 ntBASIC4.86□□□□□ -1.63
Col2a1P28481 2510017J16Rik-201ENSMUST00000198718 1263 ntBASIC4.86□□□□□ -1.63
Col2a1P28481 Gm7468-201ENSMUST00000203900 652 ntBASIC4.86□□□□□ -1.63
Col2a1P28481 Gm3213-201ENSMUST00000219296 441 ntBASIC4.86□□□□□ -1.63
Col2a1P28481 Olfr918-201ENSMUST00000055099 978 ntAPPRIS P2 BASIC4.86□□□□□ -1.63
Col2a1P28481 mt-Rnr1-201ENSMUST00000082388 955 ntBASIC4.86□□□□□ -1.63
Col2a1P28481 Mir323-201ENSMUST00000083683 86 ntBASIC4.86□□□□□ -1.63
Col2a1P28481 Fign-203ENSMUST00000131615 9734 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
Col2a1P28481 Ehf-201ENSMUST00000090475 4469 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
Col2a1P28481 Olfr828-202ENSMUST00000215380 1689 ntAPPRIS P1 TSL 3 BASIC4.86□□□□□ -1.63
Col2a1P28481 Gm8104-201ENSMUST00000168165 1761 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
Col2a1P28481 A830019P07Rik-201ENSMUST00000178904 1777 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
Col2a1P28481 Gm43844-201ENSMUST00000202926 5605 ntBASIC4.86□□□□□ -1.63
Col2a1P28481 Vmn1r30-202ENSMUST00000226334 1946 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
Col2a1P28481 Gm6558-201ENSMUST00000191934 1973 ntBASIC4.85□□□□□ -1.63
Col2a1P28481 4930525G20Rik-201ENSMUST00000181912 2987 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
Col2a1P28481 Zbtb20-204ENSMUST00000114694 26901 ntAPPRIS P3 TSL 5 BASIC4.85□□□□□ -1.63
Col2a1P28481 Rif1-201ENSMUST00000112693 8509 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
Col2a1P28481 Gm8402-201ENSMUST00000118183 1770 ntBASIC4.85□□□□□ -1.63
Col2a1P28481 Gm8383-201ENSMUST00000121179 1770 ntBASIC4.85□□□□□ -1.63
Col2a1P28481 Gm37192-201ENSMUST00000194479 1348 ntBASIC4.85□□□□□ -1.63
Col2a1P28481 Olfr228-202ENSMUST00000217292 1854 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
Col2a1P28481 Fat4-201ENSMUST00000061260 16109 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
Col2a1P28481 Gm24581-201ENSMUST00000103962 133 ntBASIC4.85□□□□□ -1.63
Col2a1P28481 Gm23781-201ENSMUST00000157940 308 ntBASIC4.85□□□□□ -1.63
Col2a1P28481 Gm7241-201ENSMUST00000159853 357 ntBASIC4.85□□□□□ -1.63
Col2a1P28481 Ppp1r2-ps9-201ENSMUST00000173100 549 ntBASIC4.85□□□□□ -1.63
Col2a1P28481 Gm14419-204ENSMUST00000178182 192 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
Col2a1P28481 Gm2004-202ENSMUST00000178872 192 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
Col2a1P28481 Gm14295-203ENSMUST00000179435 192 ntTSL 5 BASIC4.85□□□□□ -1.63
Col2a1P28481 Gm27190-201ENSMUST00000184890 542 ntBASIC4.85□□□□□ -1.63
Col2a1P28481 Gm28784-201ENSMUST00000187817 1011 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
Col2a1P28481 4930532M18Rik-202ENSMUST00000190980 534 ntTSL 3 BASIC4.85□□□□□ -1.63
Col2a1P28481 Mir129b-201ENSMUST00000197461 65 ntBASIC4.85□□□□□ -1.63
Col2a1P28481 Gm43929-201ENSMUST00000203025 409 ntBASIC4.85□□□□□ -1.63
Col2a1P28481 Gm44839-201ENSMUST00000206590 241 ntTSL 5 BASIC4.85□□□□□ -1.63
Col2a1P28481 Chd9-201ENSMUST00000048665 12008 ntAPPRIS P3 TSL 1 (best) BASIC4.85□□□□□ -1.63
Col2a1P28481 Gm5548-201ENSMUST00000055878 397 ntBASIC4.85□□□□□ -1.63
Col2a1P28481 A730045E13Rik-201ENSMUST00000066740 854 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
Col2a1P28481 Olfr98-201ENSMUST00000080759 1039 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
Col2a1P28481 Ankrd34c-201ENSMUST00000060700 5457 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
Col2a1P28481 Vmn2r30-202ENSMUST00000174368 3688 ntTSL 2 BASIC4.85□□□□□ -1.63
Col2a1P28481 Acsm3-204ENSMUST00000106528 2755 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
Col2a1P28481 Tmem45a-201ENSMUST00000023435 2701 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
Col2a1P28481 Dnah8-201ENSMUST00000170651 14583 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
Col2a1P28481 Cyp2c40-201ENSMUST00000160476 1803 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
Col2a1P28481 Gm43605-201ENSMUST00000199663 3426 ntBASIC4.84□□□□□ -1.63
Col2a1P28481 Pnpla8-201ENSMUST00000043082 13507 ntAPPRIS P2 TSL 1 (best) BASIC4.84□□□□□ -1.63
Col2a1P28481 Agtr2-201ENSMUST00000089188 3283 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
Col2a1P28481 Kctd12b-202ENSMUST00000112572 4851 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
Col2a1P28481 Nck1-201ENSMUST00000112874 1513 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
Col2a1P28481 Olfr753-ps1-204ENSMUST00000219487 2956 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.63
Col2a1P28481 Olfr330-202ENSMUST00000213188 2836 ntAPPRIS P1 TSL 2 BASIC4.84□□□□□ -1.63
Col2a1P28481 Gm29260-201ENSMUST00000186391 2759 ntTSL 3 BASIC4.84□□□□□ -1.63
Col2a1P28481 Ush2a-201ENSMUST00000060479 15695 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
Col2a1P28481 Gm15916-201ENSMUST00000118355 736 ntBASIC4.84□□□□□ -1.63
Col2a1P28481 Gm14516-201ENSMUST00000120012 252 ntBASIC4.84□□□□□ -1.63
Col2a1P28481 Gm13902-201ENSMUST00000120168 605 ntBASIC4.84□□□□□ -1.63
Col2a1P28481 Olfr999-ps1-201ENSMUST00000122319 949 ntBASIC4.84□□□□□ -1.63
Col2a1P28481 Gm13173-201ENSMUST00000151703 441 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
Col2a1P28481 1700080G11Rik-201ENSMUST00000156401 436 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
Col2a1P28481 Gm23228-201ENSMUST00000157296 270 ntBASIC4.84□□□□□ -1.63
Retrieved 100 of 76,532 protein–RNA pairs in 79.5 ms