Protein–RNA interactions for Protein: Q99LI9

Clp1, Polyribonucleotide 5'-hydroxyl-kinase Clp1, mousemouse

Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clp1Q99LI9 Gm14305-203ENSMUST00000108983 1497 ntAPPRIS P1 TSL 3 BASIC6.38□□□□□ -1.39
Clp1Q99LI9 Gm2026-202ENSMUST00000109008 1497 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
Clp1Q99LI9 Gm4724-202ENSMUST00000109046 1497 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
Clp1Q99LI9 Gm4631-201ENSMUST00000109050 1494 ntTSL 5 BASIC6.38□□□□□ -1.39
Clp1Q99LI9 Gm14434-203ENSMUST00000122097 1497 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
Clp1Q99LI9 Gm11007-202ENSMUST00000178120 1497 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
Clp1Q99LI9 Gm2007-202ENSMUST00000178133 1497 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
Clp1Q99LI9 Gm11007-203ENSMUST00000185834 1494 ntTSL 5 BASIC6.38□□□□□ -1.39
Clp1Q99LI9 Gm2007-203ENSMUST00000189494 1494 ntTSL 5 BASIC6.38□□□□□ -1.39
Clp1Q99LI9 Vmn1r66-201ENSMUST00000060374 1524 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
Clp1Q99LI9 Olfr799-205ENSMUST00000217364 1580 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
Clp1Q99LI9 Gdap10-201ENSMUST00000180613 5003 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Clp1Q99LI9 Gm18913-201ENSMUST00000204311 1789 ntBASIC6.38□□□□□ -1.39
Clp1Q99LI9 Vmn1r35-202ENSMUST00000227346 1854 ntBASIC6.38□□□□□ -1.39
Clp1Q99LI9 Ptpn22-201ENSMUST00000029433 2743 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Clp1Q99LI9 Cnot2-203ENSMUST00000105267 2800 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Clp1Q99LI9 9530026P05Rik-202ENSMUST00000181145 2968 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Clp1Q99LI9 Kif4-ps-201ENSMUST00000184686 3665 ntBASIC6.38□□□□□ -1.39
Clp1Q99LI9 Xpnpep3-203ENSMUST00000163754 5383 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
Clp1Q99LI9 Uevld-201ENSMUST00000094398 4616 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
Clp1Q99LI9 Tnfrsf22-201ENSMUST00000075588 4170 ntAPPRIS ALT2 TSL 1 (best) BASIC6.37□□□□□ -1.39
Clp1Q99LI9 Ogdh-201ENSMUST00000003461 4127 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
Clp1Q99LI9 Gm29825-201ENSMUST00000214237 3775 ntTSL 5 BASIC6.37□□□□□ -1.39
Clp1Q99LI9 Lmo3-204ENSMUST00000162772 3664 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
Clp1Q99LI9 Gm28710-202ENSMUST00000211738 2987 ntAPPRIS P1 TSL 5 BASIC6.37□□□□□ -1.39
Clp1Q99LI9 Gm10220-201ENSMUST00000088236 2980 ntAPPRIS P1 TSL 5 BASIC6.37□□□□□ -1.39
Clp1Q99LI9 Mdga2-210ENSMUST00000222167 2871 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
Clp1Q99LI9 Prox1-202ENSMUST00000175916 7913 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
Clp1Q99LI9 Gm42989-201ENSMUST00000200646 2306 ntBASIC6.37□□□□□ -1.39
Clp1Q99LI9 Gm38381-201ENSMUST00000193594 2275 ntBASIC6.37□□□□□ -1.39
Clp1Q99LI9 Slc16a4-201ENSMUST00000029502 2248 ntAPPRIS P3 TSL 1 (best) BASIC6.37□□□□□ -1.39
Clp1Q99LI9 Gm43031-201ENSMUST00000198500 1887 ntBASIC6.37□□□□□ -1.39
Clp1Q99LI9 Cnot1-203ENSMUST00000211887 8364 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
Clp1Q99LI9 Nlrp10-201ENSMUST00000055745 4504 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
Clp1Q99LI9 Fbxw16-201ENSMUST00000084984 1497 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
Clp1Q99LI9 Gm42661-201ENSMUST00000202364 1442 ntBASIC6.37□□□□□ -1.39
Clp1Q99LI9 Gm42561-201ENSMUST00000202563 1442 ntBASIC6.37□□□□□ -1.39
Clp1Q99LI9 Dcun1d4-202ENSMUST00000087181 4117 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
Clp1Q99LI9 Prrg1-201ENSMUST00000114024 3900 ntAPPRIS P1 TSL 2 BASIC6.37□□□□□ -1.39
Clp1Q99LI9 Ppargc1a-203ENSMUST00000132734 6464 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
Clp1Q99LI9 Gm16017-201ENSMUST00000119834 208 ntBASIC6.37□□□□□ -1.39
Clp1Q99LI9 Gm5942-201ENSMUST00000120046 439 ntBASIC6.37□□□□□ -1.39
Clp1Q99LI9 Gm14815-201ENSMUST00000120060 488 ntBASIC6.37□□□□□ -1.39
Clp1Q99LI9 Gm16179-201ENSMUST00000120685 373 ntBASIC6.37□□□□□ -1.39
Clp1Q99LI9 Gm24836-201ENSMUST00000122609 108 ntBASIC6.37□□□□□ -1.39
Clp1Q99LI9 Gm11184-201ENSMUST00000126437 268 ntTSL 3 BASIC6.37□□□□□ -1.39
Clp1Q99LI9 Gm14808-201ENSMUST00000129259 361 ntTSL 3 BASIC6.37□□□□□ -1.39
Clp1Q99LI9 Gm12343-201ENSMUST00000138817 414 ntTSL 3 BASIC6.37□□□□□ -1.39
Clp1Q99LI9 Gm25334-201ENSMUST00000158036 110 ntBASIC6.37□□□□□ -1.39
Clp1Q99LI9 Gm23069-201ENSMUST00000158240 311 ntBASIC6.37□□□□□ -1.39
Clp1Q99LI9 Gm24359-201ENSMUST00000158418 221 ntBASIC6.37□□□□□ -1.39
Clp1Q99LI9 Gm15970-201ENSMUST00000160623 834 ntBASIC6.37□□□□□ -1.39
Clp1Q99LI9 Gm16028-201ENSMUST00000162347 890 ntTSL 5 BASIC6.37□□□□□ -1.39
Clp1Q99LI9 Gm18343-201ENSMUST00000172802 604 ntBASIC6.37□□□□□ -1.39
Clp1Q99LI9 Gm3488-201ENSMUST00000178220 519 ntAPPRIS ALT2 TSL 1 (best) BASIC6.37□□□□□ -1.39
Clp1Q99LI9 Gm3317-201ENSMUST00000179659 519 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
Clp1Q99LI9 Gm26936-201ENSMUST00000182424 382 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
Clp1Q99LI9 Mir7006-201ENSMUST00000183624 69 ntBASIC6.37□□□□□ -1.39
Clp1Q99LI9 Gm27660-201ENSMUST00000184028 208 ntBASIC6.37□□□□□ -1.39
Clp1Q99LI9 Mrgprb12-ps-201ENSMUST00000186150 949 ntBASIC6.37□□□□□ -1.39
Clp1Q99LI9 1810044D09Rik-201ENSMUST00000186472 486 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
Clp1Q99LI9 5830405F06Rik-202ENSMUST00000193357 844 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
Clp1Q99LI9 1700040K01Rik-201ENSMUST00000195145 438 ntBASIC6.37□□□□□ -1.39
Clp1Q99LI9 Ranbp2-ps12-201ENSMUST00000197110 386 ntBASIC6.37□□□□□ -1.39
Clp1Q99LI9 Gm42814-201ENSMUST00000199370 460 ntBASIC6.37□□□□□ -1.39
Clp1Q99LI9 Gm30484-201ENSMUST00000200327 449 ntTSL 5 BASIC6.37□□□□□ -1.39
Clp1Q99LI9 Gm8039-201ENSMUST00000204758 712 ntBASIC6.37□□□□□ -1.39
Clp1Q99LI9 Gm7039-201ENSMUST00000205138 346 ntBASIC6.37□□□□□ -1.39
Clp1Q99LI9 Gm33248-202ENSMUST00000206954 486 ntTSL 5 BASIC6.37□□□□□ -1.39
Clp1Q99LI9 Gm44992-209ENSMUST00000209680 1083 ntTSL 5 BASIC6.37□□□□□ -1.39
Clp1Q99LI9 AC166060.1-201ENSMUST00000213509 425 ntTSL 5 BASIC6.37□□□□□ -1.39
Clp1Q99LI9 AC151968.1-201ENSMUST00000214437 568 ntTSL 5 BASIC6.37□□□□□ -1.39
Clp1Q99LI9 AC165164.1-202ENSMUST00000219324 649 ntTSL 3 BASIC6.37□□□□□ -1.39
Clp1Q99LI9 AC122924.2-201ENSMUST00000220799 298 ntBASIC6.37□□□□□ -1.39
Clp1Q99LI9 AC155634.2-201ENSMUST00000222001 489 ntTSL 3 BASIC6.37□□□□□ -1.39
Clp1Q99LI9 Gm35558-203ENSMUST00000222264 204 ntBASIC6.37□□□□□ -1.39
Clp1Q99LI9 Gm10037-204ENSMUST00000222626 692 ntAPPRIS ALT2 TSL 3 BASIC6.37□□□□□ -1.39
Clp1Q99LI9 Ap3m1-208ENSMUST00000224016 764 ntBASIC6.37□□□□□ -1.39
Clp1Q99LI9 AC154592.1-201ENSMUST00000225784 574 ntBASIC6.37□□□□□ -1.39
Clp1Q99LI9 Gm7099-201ENSMUST00000080066 554 ntBASIC6.37□□□□□ -1.39
Clp1Q99LI9 Mir133b-201ENSMUST00000083546 119 ntBASIC6.37□□□□□ -1.39
Clp1Q99LI9 n-R5s161-201ENSMUST00000083728 114 ntBASIC6.37□□□□□ -1.39
Clp1Q99LI9 Vps50-203ENSMUST00000170873 3687 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
Clp1Q99LI9 Zfp874a-202ENSMUST00000075255 3238 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
Clp1Q99LI9 Olfr167-202ENSMUST00000214315 7435 ntAPPRIS P1 TSL 5 BASIC6.37□□□□□ -1.39
Clp1Q99LI9 Gabrg2-203ENSMUST00000109290 2868 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
Clp1Q99LI9 Vmn2r103-201ENSMUST00000172203 2571 ntAPPRIS P1 TSL 5 BASIC6.37□□□□□ -1.39
Clp1Q99LI9 Gm42697-201ENSMUST00000198992 4092 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
Clp1Q99LI9 Gm43395-201ENSMUST00000198717 2240 ntBASIC6.37□□□□□ -1.39
Clp1Q99LI9 Gm43606-201ENSMUST00000195938 3556 ntBASIC6.37□□□□□ -1.39
Clp1Q99LI9 Slc6a14-201ENSMUST00000033414 3434 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
Clp1Q99LI9 Rspry1-205ENSMUST00000211983 3397 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
Clp1Q99LI9 Xpr1-201ENSMUST00000027741 7492 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
Clp1Q99LI9 Csta1-201ENSMUST00000096090 2783 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
Clp1Q99LI9 Gm9700-201ENSMUST00000193786 1617 ntBASIC6.36□□□□□ -1.39
Clp1Q99LI9 Gm43209-201ENSMUST00000198949 1588 ntBASIC6.36□□□□□ -1.39
Clp1Q99LI9 Gm45562-201ENSMUST00000210015 1537 ntBASIC6.36□□□□□ -1.39
Clp1Q99LI9 Nsun6-203ENSMUST00000114713 2420 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
Clp1Q99LI9 Olfr441-202ENSMUST00000213649 2402 ntAPPRIS P1 TSL 3 BASIC6.36□□□□□ -1.39
Clp1Q99LI9 AC154576.1-202ENSMUST00000223966 3320 ntBASIC6.36□□□□□ -1.39
Retrieved 100 of 76,532 protein–RNA pairs in 62.5 ms