Protein–RNA interactions for Protein: Q04887

Sox9, Transcription factor SOX-9, mousemouse

Predictions only

Length 507 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox9Q04887 Gm43408-201ENSMUST00000198263 440 ntBASIC5.74□□□□□ -1.49
Sox9Q04887 Gm18327-201ENSMUST00000202426 830 ntBASIC5.74□□□□□ -1.49
Sox9Q04887 4930404I20Rik-201ENSMUST00000203246 498 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
Sox9Q04887 Gm5027-201ENSMUST00000206700 375 ntBASIC5.74□□□□□ -1.49
Sox9Q04887 Gm5735-201ENSMUST00000207053 167 ntBASIC5.74□□□□□ -1.49
Sox9Q04887 Olfr1483-ps1-201ENSMUST00000208241 334 ntBASIC5.74□□□□□ -1.49
Sox9Q04887 Gm32507-201ENSMUST00000209552 437 ntTSL 5 BASIC5.74□□□□□ -1.49
Sox9Q04887 CT025617.1-201ENSMUST00000216487 725 ntTSL 5 BASIC5.74□□□□□ -1.49
Sox9Q04887 AC122301.3-201ENSMUST00000217707 716 ntTSL 5 BASIC5.74□□□□□ -1.49
Sox9Q04887 AC154329.2-201ENSMUST00000225257 383 ntBASIC5.74□□□□□ -1.49
Sox9Q04887 AC158521.1-201ENSMUST00000225295 660 ntBASIC5.74□□□□□ -1.49
Sox9Q04887 Bcl2l15-201ENSMUST00000062945 833 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
Sox9Q04887 Olfr883-201ENSMUST00000072974 930 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
Sox9Q04887 mt-Nd4l-201ENSMUST00000084013 297 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
Sox9Q04887 Gm43498-201ENSMUST00000202002 1486 ntBASIC5.74□□□□□ -1.49
Sox9Q04887 Hspd1-ps2-201ENSMUST00000210003 1697 ntBASIC5.74□□□□□ -1.49
Sox9Q04887 Olfr690-203ENSMUST00000216230 2085 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
Sox9Q04887 AC152414.1-201ENSMUST00000218784 2287 ntTSL 5 BASIC5.74□□□□□ -1.49
Sox9Q04887 Gm10521-201ENSMUST00000097466 2574 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
Sox9Q04887 Olfr684-204ENSMUST00000217136 3182 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
Sox9Q04887 Agl-201ENSMUST00000040603 9625 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
Sox9Q04887 Gm12018-201ENSMUST00000150694 3375 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
Sox9Q04887 Gm37971-201ENSMUST00000193516 3391 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
Sox9Q04887 Eps8-202ENSMUST00000100841 4151 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
Sox9Q04887 Hlcs-209ENSMUST00000228910 4150 ntAPPRIS ALT2 BASIC5.74□□□□□ -1.49
Sox9Q04887 Gm37205-201ENSMUST00000194820 2736 ntBASIC5.74□□□□□ -1.49
Sox9Q04887 Gm37773-201ENSMUST00000194141 2120 ntBASIC5.74□□□□□ -1.49
Sox9Q04887 Olfr1305-202ENSMUST00000213405 1815 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
Sox9Q04887 Tbx22-204ENSMUST00000168403 1715 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
Sox9Q04887 Hormad1-202ENSMUST00000090797 1511 ntAPPRIS P3 TSL 1 (best) BASIC5.74□□□□□ -1.49
Sox9Q04887 Lypd6-205ENSMUST00000169232 3499 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
Sox9Q04887 Prr14l-201ENSMUST00000120129 9959 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
Sox9Q04887 Clec4a2-202ENSMUST00000041779 2481 ntAPPRIS P3 TSL 1 (best) BASIC5.73□□□□□ -1.49
Sox9Q04887 Btf3l4-204ENSMUST00000102742 3141 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
Sox9Q04887 Gm11674-201ENSMUST00000124855 3005 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
Sox9Q04887 Clk1-201ENSMUST00000034868 1796 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
Sox9Q04887 Vmn1r21-202ENSMUST00000203488 1673 ntAPPRIS P1 TSL 2 BASIC5.73□□□□□ -1.49
Sox9Q04887 Zan-201ENSMUST00000117564 16481 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
Sox9Q04887 Zfp640-202ENSMUST00000224116 1562 ntBASIC5.73□□□□□ -1.49
Sox9Q04887 Ubr4-212ENSMUST00000165860 15798 ntTSL 5 BASIC5.73□□□□□ -1.49
Sox9Q04887 Gm37174-201ENSMUST00000194699 3058 ntBASIC5.73□□□□□ -1.49
Sox9Q04887 Igkv5-37-201ENSMUST00000103372 359 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
Sox9Q04887 Traj46-201ENSMUST00000103696 63 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
Sox9Q04887 Iglv2-201ENSMUST00000103752 348 ntAPPRIS ALT2 BASIC5.73□□□□□ -1.49
Sox9Q04887 Gm14403-201ENSMUST00000108940 774 ntTSL 5 BASIC5.73□□□□□ -1.49
Sox9Q04887 Mir1193-201ENSMUST00000116761 121 ntBASIC5.73□□□□□ -1.49
Sox9Q04887 Gm11346-201ENSMUST00000118346 704 ntBASIC5.73□□□□□ -1.49
Sox9Q04887 Gm14238-201ENSMUST00000120227 323 ntBASIC5.73□□□□□ -1.49
Sox9Q04887 Gm14506-201ENSMUST00000121165 536 ntBASIC5.73□□□□□ -1.49
Sox9Q04887 3110004A20Rik-201ENSMUST00000123904 385 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
Sox9Q04887 Gm22390-201ENSMUST00000157588 325 ntBASIC5.73□□□□□ -1.49
Sox9Q04887 Gm23179-201ENSMUST00000158693 304 ntBASIC5.73□□□□□ -1.49
Sox9Q04887 Gm17332-201ENSMUST00000165626 87 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
Sox9Q04887 Gm6155-201ENSMUST00000173735 341 ntBASIC5.73□□□□□ -1.49
Sox9Q04887 Ranbp2-ps8-201ENSMUST00000183723 345 ntBASIC5.73□□□□□ -1.49
Sox9Q04887 Gm8676-201ENSMUST00000184206 637 ntBASIC5.73□□□□□ -1.49
Sox9Q04887 Gm27760-201ENSMUST00000185048 114 ntBASIC5.73□□□□□ -1.49
Sox9Q04887 Gm37550-201ENSMUST00000193230 463 ntBASIC5.73□□□□□ -1.49
Sox9Q04887 Gm29950-201ENSMUST00000195273 237 ntBASIC5.73□□□□□ -1.49
Sox9Q04887 Csn1s2b-204ENSMUST00000197301 627 ntAPPRIS ALT2 TSL 5 BASIC5.73□□□□□ -1.49
Sox9Q04887 Gm5-202ENSMUST00000202386 420 ntTSL 3 BASIC5.73□□□□□ -1.49
Sox9Q04887 Gm6702-201ENSMUST00000208496 471 ntBASIC5.73□□□□□ -1.49
Sox9Q04887 Gm44909-201ENSMUST00000208756 165 ntBASIC5.73□□□□□ -1.49
Sox9Q04887 Gm3912-203ENSMUST00000211024 367 ntBASIC5.73□□□□□ -1.49
Sox9Q04887 Rpl18a-205ENSMUST00000212494 473 ntTSL 5 BASIC5.73□□□□□ -1.49
Sox9Q04887 Gm18541-201ENSMUST00000215935 538 ntBASIC5.73□□□□□ -1.49
Sox9Q04887 AC165164.1-202ENSMUST00000219324 649 ntTSL 3 BASIC5.73□□□□□ -1.49
Sox9Q04887 Gm35890-201ENSMUST00000221195 564 ntTSL 5 BASIC5.73□□□□□ -1.49
Sox9Q04887 4930453C13Rik-201ENSMUST00000222376 765 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
Sox9Q04887 1700037F03Rik-201ENSMUST00000223032 365 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
Sox9Q04887 AC154840.1-201ENSMUST00000225216 408 ntBASIC5.73□□□□□ -1.49
Sox9Q04887 AC158955.1-201ENSMUST00000227140 385 ntBASIC5.73□□□□□ -1.49
Sox9Q04887 Anapc13-201ENSMUST00000038673 411 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
Sox9Q04887 Olfr25-201ENSMUST00000071449 1068 ntAPPRIS P2 BASIC5.73□□□□□ -1.49
Sox9Q04887 Defa-ps18-201ENSMUST00000098889 371 ntBASIC5.73□□□□□ -1.49
Sox9Q04887 Gm29666-201ENSMUST00000189185 8038 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
Sox9Q04887 Gm20125-201ENSMUST00000185722 3201 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
Sox9Q04887 Gm45149-201ENSMUST00000206459 2172 ntBASIC5.73□□□□□ -1.49
Sox9Q04887 Bbox1-201ENSMUST00000046233 4030 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
Sox9Q04887 Gm45562-201ENSMUST00000210015 1537 ntBASIC5.73□□□□□ -1.49
Sox9Q04887 Zfp280d-201ENSMUST00000098576 4387 ntAPPRIS P3 TSL 1 (best) BASIC5.73□□□□□ -1.49
Sox9Q04887 Sirpb1a-201ENSMUST00000099201 1419 ntAPPRIS ALT2 TSL 5 BASIC5.73□□□□□ -1.49
Sox9Q04887 Olfr726-208ENSMUST00000217422 1302 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
Sox9Q04887 Fgf7-201ENSMUST00000064794 2672 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Sox9Q04887 Pcdh15-203ENSMUST00000105424 6932 ntAPPRIS ALT2 TSL 5 BASIC5.72□□□□□ -1.49
Sox9Q04887 Pcdh15-202ENSMUST00000092420 6917 ntAPPRIS ALT2 TSL 1 (best) BASIC5.72□□□□□ -1.49
Sox9Q04887 Cxcl15-201ENSMUST00000031322 2127 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Sox9Q04887 Pias1-202ENSMUST00000214830 2492 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
Sox9Q04887 Mmp1a-202ENSMUST00000217651 2011 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
Sox9Q04887 Il22ra2-201ENSMUST00000036564 2498 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Sox9Q04887 Olfr406-202ENSMUST00000214303 2842 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
Sox9Q04887 Gm10165-201ENSMUST00000217666 2380 ntTSL 2 BASIC5.72□□□□□ -1.49
Sox9Q04887 Shoc2-202ENSMUST00000169861 4065 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Sox9Q04887 Fbxw15-201ENSMUST00000056745 1495 ntAPPRIS P2 TSL 1 (best) BASIC5.72□□□□□ -1.49
Sox9Q04887 Gm26814-201ENSMUST00000181178 4149 ntBASIC5.72□□□□□ -1.49
Sox9Q04887 Gm37087-201ENSMUST00000192966 3309 ntBASIC5.72□□□□□ -1.49
Sox9Q04887 Gm37752-201ENSMUST00000193494 3309 ntBASIC5.72□□□□□ -1.49
Sox9Q04887 Tlr6-201ENSMUST00000062315 3677 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Sox9Q04887 AC121942.1-201ENSMUST00000224459 2891 ntBASIC5.72□□□□□ -1.49
Sox9Q04887 Igkv1-133-201ENSMUST00000103304 374 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
Retrieved 100 of 76,532 protein–RNA pairs in 78.4 ms