Protein–RNA interactions for Protein: Q6ZPL9

Ddx55, ATP-dependent RNA helicase DDX55, mousemouse

Known RBP Predictions only

Length 600 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx55Q6ZPL9 CT030195.1-201ENSMUST00000223887 378 ntBASIC5.85□□□□□ -1.47
Ddx55Q6ZPL9 CT030705.1-201ENSMUST00000223971 533 ntBASIC5.85□□□□□ -1.47
Ddx55Q6ZPL9 AC167192.1-201ENSMUST00000225908 139 ntBASIC5.85□□□□□ -1.47
Ddx55Q6ZPL9 A530021J07Rik-201ENSMUST00000066005 414 ntTSL 3 BASIC5.85□□□□□ -1.47
Ddx55Q6ZPL9 Mbd3l1-201ENSMUST00000069218 850 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
Ddx55Q6ZPL9 Tas2r120-201ENSMUST00000071707 892 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
Ddx55Q6ZPL9 Olfr1507-201ENSMUST00000073571 1112 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
Ddx55Q6ZPL9 n-R5s85-201ENSMUST00000083453 113 ntBASIC5.85□□□□□ -1.47
Ddx55Q6ZPL9 Mmp1a-202ENSMUST00000217651 2011 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
Ddx55Q6ZPL9 Mmp1a-201ENSMUST00000034492 2022 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
Ddx55Q6ZPL9 Pfkfb2-202ENSMUST00000066863 4425 ntAPPRIS P3 TSL 1 (best) BASIC5.85□□□□□ -1.47
Ddx55Q6ZPL9 Gm43386-201ENSMUST00000199654 4001 ntBASIC5.85□□□□□ -1.47
Ddx55Q6ZPL9 Lrrn3-201ENSMUST00000043884 3865 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
Ddx55Q6ZPL9 Alkbh8-204ENSMUST00000211933 7674 ntAPPRIS P2 TSL 1 (best) BASIC5.85□□□□□ -1.47
Ddx55Q6ZPL9 Klhl4-202ENSMUST00000113371 3566 ntAPPRIS ALT2 TSL 1 (best) BASIC5.85□□□□□ -1.47
Ddx55Q6ZPL9 Gm10727-201ENSMUST00000197107 1602 ntBASIC5.85□□□□□ -1.47
Ddx55Q6ZPL9 Olfr1310-202ENSMUST00000213559 4897 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
Ddx55Q6ZPL9 Klhl4-201ENSMUST00000040504 3584 ntAPPRIS P3 TSL 1 (best) BASIC5.85□□□□□ -1.47
Ddx55Q6ZPL9 Zfp317-202ENSMUST00000208694 3988 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
Ddx55Q6ZPL9 AC162908.1-201ENSMUST00000219164 4563 ntBASIC5.84□□□□□ -1.47
Ddx55Q6ZPL9 Setd2-201ENSMUST00000153838 8350 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.47
Ddx55Q6ZPL9 Kcnj2-201ENSMUST00000042970 5444 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
Ddx55Q6ZPL9 Amy1-201ENSMUST00000067980 1985 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
Ddx55Q6ZPL9 Olfr137-202ENSMUST00000213505 2514 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.47
Ddx55Q6ZPL9 Tc2n-202ENSMUST00000160715 1386 ntTSL 5 BASIC5.84□□□□□ -1.47
Ddx55Q6ZPL9 Olfr373-202ENSMUST00000213940 4145 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.47
Ddx55Q6ZPL9 Zfp808-204ENSMUST00000221772 1379 ntTSL 5 BASIC5.84□□□□□ -1.47
Ddx55Q6ZPL9 Olfr1270-203ENSMUST00000215578 4982 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.47
Ddx55Q6ZPL9 Gm36963-201ENSMUST00000193506 2324 ntBASIC5.84□□□□□ -1.47
Ddx55Q6ZPL9 Zfy2-202ENSMUST00000187148 2846 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
Ddx55Q6ZPL9 Dennd4c-204ENSMUST00000142837 5870 ntAPPRIS P2 TSL 1 (best) BASIC5.84□□□□□ -1.47
Ddx55Q6ZPL9 Trappc1-203ENSMUST00000102602 751 ntAPPRIS P1 TSL 2 BASIC5.84□□□□□ -1.47
Ddx55Q6ZPL9 Smpx-202ENSMUST00000112520 503 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.47
Ddx55Q6ZPL9 Gm22488-201ENSMUST00000116811 127 ntBASIC5.84□□□□□ -1.47
Ddx55Q6ZPL9 Gm11369-201ENSMUST00000120812 318 ntBASIC5.84□□□□□ -1.47
Ddx55Q6ZPL9 Gm13194-201ENSMUST00000142299 311 ntBASIC5.84□□□□□ -1.47
Ddx55Q6ZPL9 Gm23023-201ENSMUST00000158767 109 ntBASIC5.84□□□□□ -1.47
Ddx55Q6ZPL9 Hsd11b1-203ENSMUST00000160929 1256 ntAPPRIS ALT2 TSL 1 (best) BASIC5.84□□□□□ -1.47
Ddx55Q6ZPL9 Prl5a1-201ENSMUST00000017208 1061 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
Ddx55Q6ZPL9 Mir3104-201ENSMUST00000174911 63 ntBASIC5.84□□□□□ -1.47
Ddx55Q6ZPL9 Obox3-ps8-201ENSMUST00000177182 960 ntBASIC5.84□□□□□ -1.47
Ddx55Q6ZPL9 Gm5777-201ENSMUST00000177265 448 ntBASIC5.84□□□□□ -1.47
Ddx55Q6ZPL9 Gm8993-201ENSMUST00000182182 983 ntBASIC5.84□□□□□ -1.47
Ddx55Q6ZPL9 Gm27025-201ENSMUST00000182392 942 ntBASIC5.84□□□□□ -1.47
Ddx55Q6ZPL9 Gm8614-201ENSMUST00000182528 978 ntBASIC5.84□□□□□ -1.47
Ddx55Q6ZPL9 Gm27528-201ENSMUST00000183544 205 ntBASIC5.84□□□□□ -1.47
Ddx55Q6ZPL9 Gm37337-201ENSMUST00000192601 993 ntBASIC5.84□□□□□ -1.47
Ddx55Q6ZPL9 Gm9442-201ENSMUST00000194242 319 ntBASIC5.84□□□□□ -1.47
Ddx55Q6ZPL9 Gm38413-201ENSMUST00000197852 348 ntTSL 2 BASIC5.84□□□□□ -1.47
Ddx55Q6ZPL9 Tsg101-ps-201ENSMUST00000201023 1170 ntBASIC5.84□□□□□ -1.47
Ddx55Q6ZPL9 Gm44128-201ENSMUST00000204909 219 ntBASIC5.84□□□□□ -1.47
Ddx55Q6ZPL9 Olfr752-ps1-201ENSMUST00000208736 1141 ntBASIC5.84□□□□□ -1.47
Ddx55Q6ZPL9 Olfr562-ps1-201ENSMUST00000210779 951 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
Ddx55Q6ZPL9 AC122937.1-201ENSMUST00000226405 793 ntBASIC5.84□□□□□ -1.47
Ddx55Q6ZPL9 AC150560.3-201ENSMUST00000227442 455 ntBASIC5.84□□□□□ -1.47
Ddx55Q6ZPL9 AC121978.1-201ENSMUST00000228357 380 ntBASIC5.84□□□□□ -1.47
Ddx55Q6ZPL9 AC161269.1-201ENSMUST00000228426 318 ntBASIC5.84□□□□□ -1.47
Ddx55Q6ZPL9 Olfr564-201ENSMUST00000061096 951 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
Ddx55Q6ZPL9 Defb35-201ENSMUST00000076786 267 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
Ddx55Q6ZPL9 Olfr1487-201ENSMUST00000076856 948 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
Ddx55Q6ZPL9 Olfr477-201ENSMUST00000091605 933 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
Ddx55Q6ZPL9 Vmn1r194-201ENSMUST00000091737 891 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
Ddx55Q6ZPL9 Mir465-201ENSMUST00000093563 74 ntBASIC5.84□□□□□ -1.47
Ddx55Q6ZPL9 Gm44288-201ENSMUST00000205061 2795 ntBASIC5.84□□□□□ -1.47
Ddx55Q6ZPL9 Olfr446-203ENSMUST00000215686 4210 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.47
Ddx55Q6ZPL9 Olfr446-204ENSMUST00000216199 4218 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.47
Ddx55Q6ZPL9 AC141438.1-201ENSMUST00000216055 3205 ntTSL 2 BASIC5.84□□□□□ -1.47
Ddx55Q6ZPL9 Epha3-201ENSMUST00000064405 5659 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
Ddx55Q6ZPL9 Olfr417-203ENSMUST00000220394 6080 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.47
Ddx55Q6ZPL9 1700019D03Rik-203ENSMUST00000114493 3619 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
Ddx55Q6ZPL9 Vmn2r-ps130-201ENSMUST00000175853 2568 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.47
Ddx55Q6ZPL9 Vmn2r-ps129-201ENSMUST00000177509 2568 ntBASIC5.84□□□□□ -1.47
Ddx55Q6ZPL9 Gm17275-201ENSMUST00000181811 2550 ntTSL 5 BASIC5.84□□□□□ -1.47
Ddx55Q6ZPL9 AC116797.1-201ENSMUST00000223988 3955 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
Ddx55Q6ZPL9 Gm37356-201ENSMUST00000193362 1613 ntBASIC5.84□□□□□ -1.47
Ddx55Q6ZPL9 Slc7a2-203ENSMUST00000117077 7626 ntAPPRIS ALT1 TSL 1 (best) BASIC5.84□□□□□ -1.47
Ddx55Q6ZPL9 Dach2-202ENSMUST00000113378 2089 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
Ddx55Q6ZPL9 CT009504.2-201ENSMUST00000217951 2960 ntTSL 5 BASIC5.84□□□□□ -1.48
Ddx55Q6ZPL9 Zfp442-201ENSMUST00000109916 2922 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.48
Ddx55Q6ZPL9 Vmn1r213-203ENSMUST00000228031 3367 ntAPPRIS ALT2 BASIC5.84□□□□□ -1.48
Ddx55Q6ZPL9 Cnot4-202ENSMUST00000114989 3279 ntAPPRIS ALT1 TSL 1 (best) BASIC5.84□□□□□ -1.48
Ddx55Q6ZPL9 Rsph4a-201ENSMUST00000169670 3650 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.48
Ddx55Q6ZPL9 AC131329.1-201ENSMUST00000221204 3487 ntBASIC5.83□□□□□ -1.48
Ddx55Q6ZPL9 Gm15910-201ENSMUST00000127564 2971 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
Ddx55Q6ZPL9 Fmo2-201ENSMUST00000045902 4066 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
Ddx55Q6ZPL9 Vps13d-201ENSMUST00000020441 15665 ntAPPRIS ALT2 TSL 5 BASIC5.83□□□□□ -1.48
Ddx55Q6ZPL9 Gm12667-201ENSMUST00000118299 1332 ntBASIC5.83□□□□□ -1.48
Ddx55Q6ZPL9 Trbv12-1-201ENSMUST00000103267 389 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
Ddx55Q6ZPL9 Gm15021-201ENSMUST00000117832 742 ntBASIC5.83□□□□□ -1.48
Ddx55Q6ZPL9 Tcea1-ps1-201ENSMUST00000117942 904 ntBASIC5.83□□□□□ -1.48
Ddx55Q6ZPL9 Gm14172-201ENSMUST00000118255 644 ntBASIC5.83□□□□□ -1.48
Ddx55Q6ZPL9 Vmn1r-ps1-201ENSMUST00000118738 573 ntBASIC5.83□□□□□ -1.48
Ddx55Q6ZPL9 Gm12190-201ENSMUST00000120001 187 ntBASIC5.83□□□□□ -1.48
Ddx55Q6ZPL9 Gm13000-201ENSMUST00000120937 496 ntBASIC5.83□□□□□ -1.48
Ddx55Q6ZPL9 Gm13745-201ENSMUST00000121994 527 ntBASIC5.83□□□□□ -1.48
Ddx55Q6ZPL9 Gm11998-201ENSMUST00000146304 972 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
Ddx55Q6ZPL9 Gm15200-201ENSMUST00000149950 410 ntTSL 2 BASIC5.83□□□□□ -1.48
Ddx55Q6ZPL9 Gm12707-201ENSMUST00000155789 489 ntTSL 3 BASIC5.83□□□□□ -1.48
Ddx55Q6ZPL9 Gm16236-201ENSMUST00000159588 379 ntBASIC5.83□□□□□ -1.48
Ddx55Q6ZPL9 Gm25525-201ENSMUST00000177701 107 ntBASIC5.83□□□□□ -1.48
Retrieved 100 of 76,532 protein–RNA pairs in 97.8 ms