Protein–RNA interactions for Protein: Q69ZI1

Sh3rf1, E3 ubiquitin-protein ligase SH3RF1, mousemouse

Predictions only

Length 892 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf1Q69ZI1 Muc16-201ENSMUST00000034653 1035 ntTSL 2 BASIC6.02□□□□□ -1.45
Sh3rf1Q69ZI1 Gm7887-201ENSMUST00000056948 537 ntBASIC6.02□□□□□ -1.45
Sh3rf1Q69ZI1 Olfr352-201ENSMUST00000065416 948 ntAPPRIS P1 BASIC6.02□□□□□ -1.45
Sh3rf1Q69ZI1 Mir421-201ENSMUST00000083575 76 ntBASIC6.02□□□□□ -1.45
Sh3rf1Q69ZI1 Ccl8-201ENSMUST00000009329 511 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
Sh3rf1Q69ZI1 Olfr1095-201ENSMUST00000099874 927 ntAPPRIS P1 BASIC6.02□□□□□ -1.45
Sh3rf1Q69ZI1 Nfib-201ENSMUST00000050872 8770 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
Sh3rf1Q69ZI1 Gm38264-201ENSMUST00000194850 2032 ntBASIC6.02□□□□□ -1.45
Sh3rf1Q69ZI1 Fancd2-201ENSMUST00000036340 5512 ntAPPRIS P3 TSL 1 (best) BASIC6.02□□□□□ -1.45
Sh3rf1Q69ZI1 Myo3b-201ENSMUST00000060208 6256 ntAPPRIS P2 TSL 5 BASIC6.02□□□□□ -1.45
Sh3rf1Q69ZI1 Clk4-203ENSMUST00000109113 1627 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
Sh3rf1Q69ZI1 Dlx6os1-201ENSMUST00000159568 4608 ntTSL 5 BASIC6.02□□□□□ -1.45
Sh3rf1Q69ZI1 Vmn1r35-202ENSMUST00000227346 1854 ntBASIC6.02□□□□□ -1.45
Sh3rf1Q69ZI1 Fmo9-201ENSMUST00000027843 3065 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
Sh3rf1Q69ZI1 Sgip1-202ENSMUST00000072481 3915 ntAPPRIS ALT2 TSL 1 (best) BASIC6.02□□□□□ -1.45
Sh3rf1Q69ZI1 Pramel3-201ENSMUST00000113176 3673 ntAPPRIS P2 TSL 1 (best) BASIC6.02□□□□□ -1.45
Sh3rf1Q69ZI1 Rhbdd1-202ENSMUST00000140020 3687 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
Sh3rf1Q69ZI1 Gm44625-201ENSMUST00000207838 1561 ntBASIC6.01□□□□□ -1.45
Sh3rf1Q69ZI1 Olfr1087-202ENSMUST00000214141 3861 ntAPPRIS P1 TSL 5 BASIC6.01□□□□□ -1.45
Sh3rf1Q69ZI1 Map9-206ENSMUST00000195640 6162 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
Sh3rf1Q69ZI1 Gm43719-201ENSMUST00000200088 2199 ntBASIC6.01□□□□□ -1.45
Sh3rf1Q69ZI1 C530043A13Rik-203ENSMUST00000189247 3364 ntBASIC6.01□□□□□ -1.45
Sh3rf1Q69ZI1 Gm15457-201ENSMUST00000129513 3990 ntTSL 2 BASIC6.01□□□□□ -1.45
Sh3rf1Q69ZI1 Neto2-203ENSMUST00000209479 4936 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
Sh3rf1Q69ZI1 9330175M20Rik-201ENSMUST00000189867 2552 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
Sh3rf1Q69ZI1 Zbbx-203ENSMUST00000107776 1978 ntAPPRIS ALT2 TSL 5 BASIC6.01□□□□□ -1.45
Sh3rf1Q69ZI1 A430027C01Rik-201ENSMUST00000194599 1644 ntBASIC6.01□□□□□ -1.45
Sh3rf1Q69ZI1 Olfr612-201ENSMUST00000104879 972 ntAPPRIS P1 BASIC6.01□□□□□ -1.45
Sh3rf1Q69ZI1 Rpl7a-ps9-201ENSMUST00000117118 777 ntBASIC6.01□□□□□ -1.45
Sh3rf1Q69ZI1 Gm13870-201ENSMUST00000117214 1023 ntBASIC6.01□□□□□ -1.45
Sh3rf1Q69ZI1 Gm13349-201ENSMUST00000118436 411 ntBASIC6.01□□□□□ -1.45
Sh3rf1Q69ZI1 Gm13503-201ENSMUST00000119017 446 ntBASIC6.01□□□□□ -1.45
Sh3rf1Q69ZI1 Gm14352-201ENSMUST00000119250 449 ntBASIC6.01□□□□□ -1.45
Sh3rf1Q69ZI1 Olfr1004-ps1-201ENSMUST00000120361 580 ntBASIC6.01□□□□□ -1.45
Sh3rf1Q69ZI1 Gm15014-201ENSMUST00000120742 258 ntBASIC6.01□□□□□ -1.45
Sh3rf1Q69ZI1 Gm25782-201ENSMUST00000122526 289 ntBASIC6.01□□□□□ -1.45
Sh3rf1Q69ZI1 Gm25294-201ENSMUST00000122791 104 ntBASIC6.01□□□□□ -1.45
Sh3rf1Q69ZI1 1700057H15Rik-201ENSMUST00000127913 595 ntTSL 3 BASIC6.01□□□□□ -1.45
Sh3rf1Q69ZI1 Gm25163-201ENSMUST00000158905 104 ntBASIC6.01□□□□□ -1.45
Sh3rf1Q69ZI1 Gm20468-201ENSMUST00000172664 452 ntTSL 3 BASIC6.01□□□□□ -1.45
Sh3rf1Q69ZI1 Csnk2b-207ENSMUST00000174024 883 ntTSL 5 BASIC6.01□□□□□ -1.45
Sh3rf1Q69ZI1 Vmn1r-ps31-201ENSMUST00000174112 238 ntBASIC6.01□□□□□ -1.45
Sh3rf1Q69ZI1 Mir7220-201ENSMUST00000183978 60 ntBASIC6.01□□□□□ -1.45
Sh3rf1Q69ZI1 Mir7211-201ENSMUST00000184071 63 ntBASIC6.01□□□□□ -1.45
Sh3rf1Q69ZI1 Gm29105-201ENSMUST00000187256 450 ntBASIC6.01□□□□□ -1.45
Sh3rf1Q69ZI1 Gm18969-201ENSMUST00000189423 730 ntBASIC6.01□□□□□ -1.45
Sh3rf1Q69ZI1 1700027A15Rik-205ENSMUST00000191122 332 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
Sh3rf1Q69ZI1 Nras-ps2-201ENSMUST00000195269 178 ntBASIC6.01□□□□□ -1.45
Sh3rf1Q69ZI1 Gm36017-201ENSMUST00000199005 923 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
Sh3rf1Q69ZI1 Gm43513-201ENSMUST00000199779 1076 ntBASIC6.01□□□□□ -1.45
Sh3rf1Q69ZI1 Gm19653-201ENSMUST00000204326 1039 ntBASIC6.01□□□□□ -1.45
Sh3rf1Q69ZI1 Rpl7a-ps14-201ENSMUST00000205097 790 ntBASIC6.01□□□□□ -1.45
Sh3rf1Q69ZI1 Gm44199-201ENSMUST00000205219 739 ntTSL 3 BASIC6.01□□□□□ -1.45
Sh3rf1Q69ZI1 Gm45690-201ENSMUST00000210775 246 ntBASIC6.01□□□□□ -1.45
Sh3rf1Q69ZI1 AC122508.1-201ENSMUST00000218365 233 ntTSL 5 BASIC6.01□□□□□ -1.45
Sh3rf1Q69ZI1 Olfr951-201ENSMUST00000078531 945 ntAPPRIS P2 BASIC6.01□□□□□ -1.45
Sh3rf1Q69ZI1 Olfr954-201ENSMUST00000080329 945 ntAPPRIS P2 BASIC6.01□□□□□ -1.45
Sh3rf1Q69ZI1 Gm25141-201ENSMUST00000083177 107 ntBASIC6.01□□□□□ -1.45
Sh3rf1Q69ZI1 Mir412-201ENSMUST00000083636 80 ntBASIC6.01□□□□□ -1.45
Sh3rf1Q69ZI1 AC132852.2-201ENSMUST00000216052 2794 ntBASIC6.01□□□□□ -1.45
Sh3rf1Q69ZI1 Fsbp-201ENSMUST00000180239 4358 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
Sh3rf1Q69ZI1 Vmn2r14-201ENSMUST00000170341 2547 ntAPPRIS P1 TSL 5 BASIC6.01□□□□□ -1.45
Sh3rf1Q69ZI1 Gm15478-201ENSMUST00000145914 2172 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
Sh3rf1Q69ZI1 Gbp3-203ENSMUST00000106222 2629 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
Sh3rf1Q69ZI1 Tgtp2-201ENSMUST00000046745 2810 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
Sh3rf1Q69ZI1 Gm42658-201ENSMUST00000197199 1575 ntBASIC6.01□□□□□ -1.45
Sh3rf1Q69ZI1 D630030B08Rik-201ENSMUST00000202983 3479 ntBASIC6.01□□□□□ -1.45
Sh3rf1Q69ZI1 Gm13101-201ENSMUST00000105763 1678 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
Sh3rf1Q69ZI1 Arhgef9-203ENSMUST00000113878 5012 ntAPPRIS P3 TSL 1 (best) BASIC6.01□□□□□ -1.45
Sh3rf1Q69ZI1 Olfr1309-204ENSMUST00000215045 5236 ntAPPRIS P1 TSL 5 BASIC6.01□□□□□ -1.45
Sh3rf1Q69ZI1 Olfr1257-202ENSMUST00000111519 2756 ntAPPRIS P1 TSL 2 BASIC6.01□□□□□ -1.45
Sh3rf1Q69ZI1 Gm19272-201ENSMUST00000184133 1753 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
Sh3rf1Q69ZI1 Iqcm-202ENSMUST00000121983 1894 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
Sh3rf1Q69ZI1 Tet2-204ENSMUST00000196398 9021 ntAPPRIS ALT2 TSL 1 (best) BASIC6□□□□□ -1.45
Sh3rf1Q69ZI1 Robo2-210ENSMUST00000226478 8059 ntBASIC6□□□□□ -1.45
Sh3rf1Q69ZI1 Kcnma1-209ENSMUST00000179097 4596 ntTSL 5 BASIC6□□□□□ -1.45
Sh3rf1Q69ZI1 Olfr398-203ENSMUST00000214334 5348 ntAPPRIS P1 TSL 5 BASIC6□□□□□ -1.45
Sh3rf1Q69ZI1 Gm10415-201ENSMUST00000204181 2825 ntTSL 2 BASIC6□□□□□ -1.45
Sh3rf1Q69ZI1 Gm6882-202ENSMUST00000207192 2365 ntAPPRIS P1 TSL 5 BASIC6□□□□□ -1.45
Sh3rf1Q69ZI1 Olfr446-202ENSMUST00000215369 4399 ntAPPRIS P1 TSL 5 BASIC6□□□□□ -1.45
Sh3rf1Q69ZI1 Plcb4-202ENSMUST00000110109 5217 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
Sh3rf1Q69ZI1 Igkv4-70-201ENSMUST00000103348 379 ntAPPRIS P1 BASIC6□□□□□ -1.45
Sh3rf1Q69ZI1 Trav14-3-201ENSMUST00000103589 384 ntAPPRIS P1 BASIC6□□□□□ -1.45
Sh3rf1Q69ZI1 Trav14n-3-201ENSMUST00000103635 280 ntAPPRIS P1 BASIC6□□□□□ -1.45
Sh3rf1Q69ZI1 Prl-202ENSMUST00000110369 895 ntAPPRIS P2 TSL 1 (best) BASIC6□□□□□ -1.45
Sh3rf1Q69ZI1 Ccnb2-ps-201ENSMUST00000118290 623 ntBASIC6□□□□□ -1.45
Sh3rf1Q69ZI1 Gm15366-201ENSMUST00000118433 1019 ntBASIC6□□□□□ -1.45
Sh3rf1Q69ZI1 Gm15231-201ENSMUST00000119174 447 ntBASIC6□□□□□ -1.45
Sh3rf1Q69ZI1 Gm11625-201ENSMUST00000119535 296 ntBASIC6□□□□□ -1.45
Sh3rf1Q69ZI1 Atf1-ps-201ENSMUST00000120608 810 ntBASIC6□□□□□ -1.45
Sh3rf1Q69ZI1 Gm8317-201ENSMUST00000121261 471 ntBASIC6□□□□□ -1.45
Sh3rf1Q69ZI1 Cyp2j7-ps3-201ENSMUST00000121405 206 ntBASIC6□□□□□ -1.45
Sh3rf1Q69ZI1 Pttg1-206ENSMUST00000121638 948 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
Sh3rf1Q69ZI1 Gm4789-201ENSMUST00000121708 1216 ntBASIC6□□□□□ -1.45
Sh3rf1Q69ZI1 Gm15141-201ENSMUST00000121860 729 ntBASIC6□□□□□ -1.45
Sh3rf1Q69ZI1 Zfp286os-201ENSMUST00000128292 713 ntTSL 3 BASIC6□□□□□ -1.45
Sh3rf1Q69ZI1 C030037F17Rik-201ENSMUST00000155211 406 ntTSL 1 (best) BASIC6□□□□□ -1.45
Sh3rf1Q69ZI1 Gm25433-201ENSMUST00000158283 286 ntBASIC6□□□□□ -1.45
Sh3rf1Q69ZI1 Gm24179-201ENSMUST00000158925 127 ntBASIC6□□□□□ -1.45
Sh3rf1Q69ZI1 2310075C17Rik-201ENSMUST00000161216 326 ntTSL 1 (best) BASIC6□□□□□ -1.45
Retrieved 100 of 76,532 protein–RNA pairs in 90.1 ms