Protein–RNA interactions for Protein: Q03358

Msx2, Homeobox protein MSX-2, mousemouse

Predictions only

Length 267 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msx2Q03358 4930563J15Rik-203ENSMUST00000219796 574 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
Msx2Q03358 AC105407.3-201ENSMUST00000224161 648 ntBASIC5.62□□□□□ -1.51
Msx2Q03358 AC164618.1-201ENSMUST00000225769 592 ntBASIC5.62□□□□□ -1.51
Msx2Q03358 AC138718.1-201ENSMUST00000225947 1009 ntBASIC5.62□□□□□ -1.51
Msx2Q03358 AC154738.7-201ENSMUST00000228606 579 ntBASIC5.62□□□□□ -1.51
Msx2Q03358 Gm7887-201ENSMUST00000056948 537 ntBASIC5.62□□□□□ -1.51
Msx2Q03358 Olfr919-201ENSMUST00000071425 948 ntAPPRIS P2 BASIC5.62□□□□□ -1.51
Msx2Q03358 Olfr339-201ENSMUST00000071437 930 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
Msx2Q03358 Krtap6-1-201ENSMUST00000076906 594 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
Msx2Q03358 Gm24036-201ENSMUST00000082868 156 ntBASIC5.62□□□□□ -1.51
Msx2Q03358 6820402A03Rik-201ENSMUST00000194648 2654 ntBASIC5.62□□□□□ -1.51
Msx2Q03358 Gm37717-201ENSMUST00000192647 3027 ntBASIC5.62□□□□□ -1.51
Msx2Q03358 Atp2c1-202ENSMUST00000085133 4665 ntAPPRIS ALT2 TSL 1 (best) BASIC5.62□□□□□ -1.51
Msx2Q03358 Vrk2-202ENSMUST00000109504 1642 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
Msx2Q03358 Herc1-201ENSMUST00000042824 15153 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
Msx2Q03358 Vmn1r213-203ENSMUST00000228031 3367 ntAPPRIS ALT2 BASIC5.62□□□□□ -1.51
Msx2Q03358 Gm42873-201ENSMUST00000196110 1726 ntBASIC5.62□□□□□ -1.51
Msx2Q03358 Atad2-208ENSMUST00000228783 3472 ntAPPRIS ALT2 BASIC5.62□□□□□ -1.51
Msx2Q03358 Rbpj-202ENSMUST00000087360 5252 ntTSL 5 BASIC5.62□□□□□ -1.51
Msx2Q03358 Dcn-201ENSMUST00000105287 1758 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
Msx2Q03358 Lingo2-210ENSMUST00000164772 3562 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
Msx2Q03358 Cfap70-203ENSMUST00000056073 3615 ntAPPRIS P4 TSL 1 (best) BASIC5.62□□□□□ -1.51
Msx2Q03358 Gm14391-204ENSMUST00000109058 1854 ntAPPRIS P1 TSL 3 BASIC5.62□□□□□ -1.51
Msx2Q03358 Lrp1b-209ENSMUST00000185258 1874 ntTSL 5 BASIC5.62□□□□□ -1.51
Msx2Q03358 AC105407.2-201ENSMUST00000223707 3911 ntBASIC5.62□□□□□ -1.51
Msx2Q03358 Gm42725-201ENSMUST00000199296 4193 ntBASIC5.62□□□□□ -1.51
Msx2Q03358 Enpp3-201ENSMUST00000020169 4253 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
Msx2Q03358 9830004L10Rik-201ENSMUST00000185548 2177 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
Msx2Q03358 Gm9077-201ENSMUST00000210657 2298 ntBASIC5.62□□□□□ -1.51
Msx2Q03358 Parp4-201ENSMUST00000161553 6387 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
Msx2Q03358 Olfr1321-202ENSMUST00000215373 4482 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
Msx2Q03358 Olfr2-205ENSMUST00000214105 5798 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
Msx2Q03358 Mcf2-203ENSMUST00000101531 3671 ntAPPRIS P3 TSL 1 (best) BASIC5.61□□□□□ -1.51
Msx2Q03358 Vmn1r-ps108-201ENSMUST00000117059 365 ntBASIC5.61□□□□□ -1.51
Msx2Q03358 Gm15076-201ENSMUST00000117076 474 ntBASIC5.61□□□□□ -1.51
Msx2Q03358 Gm8250-201ENSMUST00000117398 774 ntBASIC5.61□□□□□ -1.51
Msx2Q03358 Prelid3b-202ENSMUST00000117442 683 ntTSL 3 BASIC5.61□□□□□ -1.51
Msx2Q03358 Gm14842-201ENSMUST00000119577 269 ntBASIC5.61□□□□□ -1.51
Msx2Q03358 Gm13493-201ENSMUST00000120318 493 ntBASIC5.61□□□□□ -1.51
Msx2Q03358 Gm11679-201ENSMUST00000121830 779 ntBASIC5.61□□□□□ -1.51
Msx2Q03358 Gm23792-201ENSMUST00000122557 93 ntBASIC5.61□□□□□ -1.51
Msx2Q03358 Gm12914-201ENSMUST00000148635 305 ntTSL 5 BASIC5.61□□□□□ -1.51
Msx2Q03358 4933407I08Rik-201ENSMUST00000151215 1294 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
Msx2Q03358 Gm22534-201ENSMUST00000158173 104 ntBASIC5.61□□□□□ -1.51
Msx2Q03358 Cd200r3-208ENSMUST00000164007 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC5.61□□□□□ -1.51
Msx2Q03358 Pate1-201ENSMUST00000170021 389 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
Msx2Q03358 Gm9944-201ENSMUST00000177649 309 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
Msx2Q03358 Rsrc2-219ENSMUST00000182955 1685 ntTSL 5 BASIC5.61□□□□□ -1.51
Msx2Q03358 Gm27004-201ENSMUST00000183300 727 ntBASIC5.61□□□□□ -1.51
Msx2Q03358 1110008L16Rik-203ENSMUST00000183654 943 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
Msx2Q03358 Mrgprc4-ps-201ENSMUST00000186018 964 ntBASIC5.61□□□□□ -1.51
Msx2Q03358 Gm2987-201ENSMUST00000187673 1693 ntBASIC5.61□□□□□ -1.51
Msx2Q03358 Gm29156-201ENSMUST00000187764 499 ntBASIC5.61□□□□□ -1.51
Msx2Q03358 Tardbp-223ENSMUST00000189048 1096 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
Msx2Q03358 1700025B11Rik-201ENSMUST00000190233 553 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Msx2Q03358 Gm43434-201ENSMUST00000196615 676 ntTSL 3 BASIC5.61□□□□□ -1.51
Msx2Q03358 Ccdc144b-203ENSMUST00000200469 2481 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Msx2Q03358 4930480C01Rik-201ENSMUST00000200913 901 ntBASIC5.61□□□□□ -1.51
Msx2Q03358 Olfr770-202ENSMUST00000203887 1658 ntAPPRIS P1 TSL 3 BASIC5.61□□□□□ -1.51
Msx2Q03358 Gm30498-201ENSMUST00000204033 615 ntTSL 5 BASIC5.61□□□□□ -1.51
Msx2Q03358 1700065L07Rik-201ENSMUST00000204961 614 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
Msx2Q03358 Fxyd1-212ENSMUST00000206305 568 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Msx2Q03358 2610306O10Rik-201ENSMUST00000206512 612 ntBASIC5.61□□□□□ -1.51
Msx2Q03358 Gm30646-201ENSMUST00000207662 180 ntBASIC5.61□□□□□ -1.51
Msx2Q03358 Gm45823-201ENSMUST00000212714 515 ntTSL 5 BASIC5.61□□□□□ -1.51
Msx2Q03358 Gm18903-201ENSMUST00000215343 480 ntBASIC5.61□□□□□ -1.51
Msx2Q03358 AC153845.2-203ENSMUST00000215889 617 ntTSL 3 BASIC5.61□□□□□ -1.51
Msx2Q03358 Gm8863-201ENSMUST00000216630 926 ntBASIC5.61□□□□□ -1.51
Msx2Q03358 Olfr78-204ENSMUST00000217123 4695 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Msx2Q03358 AC152946.2-201ENSMUST00000219071 337 ntBASIC5.61□□□□□ -1.51
Msx2Q03358 AC140299.2-201ENSMUST00000219546 1969 ntBASIC5.61□□□□□ -1.51
Msx2Q03358 AC108401.2-201ENSMUST00000220316 346 ntTSL 3 BASIC5.61□□□□□ -1.51
Msx2Q03358 AC079644.2-201ENSMUST00000220581 322 ntBASIC5.61□□□□□ -1.51
Msx2Q03358 Gm7753-201ENSMUST00000221007 867 ntBASIC5.61□□□□□ -1.51
Msx2Q03358 AC132954.1-201ENSMUST00000221017 342 ntBASIC5.61□□□□□ -1.51
Msx2Q03358 Gm34552-201ENSMUST00000223381 636 ntTSL 5 BASIC5.61□□□□□ -1.51
Msx2Q03358 CT030238.4-203ENSMUST00000227343 836 ntBASIC5.61□□□□□ -1.51
Msx2Q03358 AC170810.1-201ENSMUST00000228267 672 ntBASIC5.61□□□□□ -1.51
Msx2Q03358 Pih1d3-201ENSMUST00000027230 1451 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
Msx2Q03358 Ninj2-201ENSMUST00000035244 823 ntAPPRIS ALT2 TSL 2 BASIC5.61□□□□□ -1.51
Msx2Q03358 Olfr1302-201ENSMUST00000054004 948 ntAPPRIS P2 BASIC5.61□□□□□ -1.51
Msx2Q03358 Olfr476-201ENSMUST00000077249 933 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
Msx2Q03358 Serpinb9g-201ENSMUST00000081927 1927 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Msx2Q03358 Mir138-1-201ENSMUST00000083480 99 ntBASIC5.61□□□□□ -1.51
Msx2Q03358 Tex11-201ENSMUST00000009814 3250 ntAPPRIS P3 TSL 1 (best) BASIC5.61□□□□□ -1.51
Msx2Q03358 Fat1-201ENSMUST00000098796 14627 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
Msx2Q03358 Macf1-202ENSMUST00000084301 23398 ntAPPRIS ALT2 TSL 5 BASIC5.61□□□□□ -1.51
Msx2Q03358 Gm12185-201ENSMUST00000059930 5252 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Msx2Q03358 Mbnl1-214ENSMUST00000193517 5151 ntAPPRIS ALT1 TSL 5 BASIC5.61□□□□□ -1.51
Msx2Q03358 Olfr31-203ENSMUST00000217035 4126 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
Msx2Q03358 Slc28a2-201ENSMUST00000028652 3852 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Msx2Q03358 Olfr911-ps1-202ENSMUST00000216496 3576 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
Msx2Q03358 Cnot4-202ENSMUST00000114989 3279 ntAPPRIS ALT1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Msx2Q03358 Pls3-202ENSMUST00000114057 3160 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Msx2Q03358 Gm14857-201ENSMUST00000117862 3185 ntBASIC5.61□□□□□ -1.51
Msx2Q03358 Olfr671-202ENSMUST00000210963 3157 ntTSL 5 BASIC5.61□□□□□ -1.51
Msx2Q03358 Gm28178-201ENSMUST00000188544 2943 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
Msx2Q03358 4930404I05Rik-201ENSMUST00000125902 2675 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
Msx2Q03358 Olfr937-202ENSMUST00000215049 2259 ntAPPRIS P1 TSL 3 BASIC5.6□□□□□ -1.51
Msx2Q03358 AC122357.3-201ENSMUST00000221260 2293 ntBASIC5.6□□□□□ -1.51
Retrieved 100 of 76,532 protein–RNA pairs in 95 ms