Protein–RNA interactions for Protein: P53784

Sox3, Transcription factor SOX-3, mousemouse

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox3P53784 Gm5591-201ENSMUST00000079759 3441 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
Sox3P53784 Olfr685-204ENSMUST00000217432 3246 ntAPPRIS ALT2 TSL 5 BASIC4.46□□□□□ -1.7
Sox3P53784 Foxr2-201ENSMUST00000096265 3210 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
Sox3P53784 Gm21244-202ENSMUST00000189201 3115 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.7
Sox3P53784 Olfr699-203ENSMUST00000216307 4193 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.7
Sox3P53784 Olfr1487-205ENSMUST00000217061 4080 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.7
Sox3P53784 Piga-201ENSMUST00000033754 3594 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
Sox3P53784 Zfp433-201ENSMUST00000085664 1800 ntTSL 5 BASIC4.46□□□□□ -1.7
Sox3P53784 4932414N04Rik-204ENSMUST00000128259 3645 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
Sox3P53784 Olfr372-202ENSMUST00000215324 3542 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.7
Sox3P53784 Vsig4-201ENSMUST00000050707 1432 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
Sox3P53784 Trim23-202ENSMUST00000069174 4258 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
Sox3P53784 Slc22a27-201ENSMUST00000075619 2152 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
Sox3P53784 Gm44109-201ENSMUST00000204514 1954 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
Sox3P53784 Zfp715-202ENSMUST00000048015 4333 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
Sox3P53784 Slc5a12-201ENSMUST00000045972 3529 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
Sox3P53784 Gm35629-201ENSMUST00000209684 2241 ntBASIC4.45□□□□□ -1.7
Sox3P53784 Steap2-209ENSMUST00000164219 10089 ntAPPRIS P1 TSL 3 BASIC4.45□□□□□ -1.7
Sox3P53784 Olfr50-202ENSMUST00000216753 4531 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
Sox3P53784 Vmn1r184-206ENSMUST00000228145 5888 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
Sox3P53784 Tgif1-202ENSMUST00000118283 1388 ntAPPRIS ALT1 TSL 1 (best) BASIC4.45□□□□□ -1.7
Sox3P53784 Olfr1305-202ENSMUST00000213405 1815 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
Sox3P53784 Olfr328-202ENSMUST00000108824 1199 ntAPPRIS P1 TSL 3 BASIC4.45□□□□□ -1.7
Sox3P53784 Spata17-202ENSMUST00000110945 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC4.45□□□□□ -1.7
Sox3P53784 Gm10241-201ENSMUST00000117664 286 ntBASIC4.45□□□□□ -1.7
Sox3P53784 Gm14516-201ENSMUST00000120012 252 ntBASIC4.45□□□□□ -1.7
Sox3P53784 Amd-ps1-201ENSMUST00000120127 994 ntBASIC4.45□□□□□ -1.7
Sox3P53784 Gm12082-201ENSMUST00000138164 600 ntTSL 3 BASIC4.45□□□□□ -1.7
Sox3P53784 Gm13180-201ENSMUST00000141222 440 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
Sox3P53784 Gm22819-201ENSMUST00000157445 303 ntBASIC4.45□□□□□ -1.7
Sox3P53784 Gm22383-201ENSMUST00000158188 327 ntBASIC4.45□□□□□ -1.7
Sox3P53784 Gm26355-201ENSMUST00000158220 105 ntBASIC4.45□□□□□ -1.7
Sox3P53784 4930570N18Rik-201ENSMUST00000159273 332 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
Sox3P53784 Gm20428-201ENSMUST00000174365 283 ntBASIC4.45□□□□□ -1.7
Sox3P53784 Cox6b2-202ENSMUST00000182048 465 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
Sox3P53784 Prl8a6-201ENSMUST00000018392 900 ntAPPRIS P3 TSL 1 (best) BASIC4.45□□□□□ -1.7
Sox3P53784 Prl8a2-201ENSMUST00000018403 939 ntAPPRIS P3 TSL 1 (best) BASIC4.45□□□□□ -1.7
Sox3P53784 A930005H10Rik-202ENSMUST00000185424 433 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
Sox3P53784 Gm9442-201ENSMUST00000194242 319 ntBASIC4.45□□□□□ -1.7
Sox3P53784 Gm43144-201ENSMUST00000198256 485 ntBASIC4.45□□□□□ -1.7
Sox3P53784 Gm31897-201ENSMUST00000205924 340 ntTSL 5 BASIC4.45□□□□□ -1.7
Sox3P53784 Gm20074-201ENSMUST00000208144 484 ntBASIC4.45□□□□□ -1.7
Sox3P53784 Gm45539-201ENSMUST00000210313 428 ntBASIC4.45□□□□□ -1.7
Sox3P53784 Gm31786-202ENSMUST00000212428 676 ntTSL 3 BASIC4.45□□□□□ -1.7
Sox3P53784 AC132384.6-201ENSMUST00000218976 1206 ntBASIC4.45□□□□□ -1.7
Sox3P53784 Fam228b-208ENSMUST00000219898 288 ntAPPRIS ALT2 TSL 3 BASIC4.45□□□□□ -1.7
Sox3P53784 Ifngas1-201ENSMUST00000220034 1121 ntTSL 2 BASIC4.45□□□□□ -1.7
Sox3P53784 AC161269.1-201ENSMUST00000228426 318 ntBASIC4.45□□□□□ -1.7
Sox3P53784 Olfr202-201ENSMUST00000049859 924 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
Sox3P53784 Mup3-201ENSMUST00000084531 938 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
Sox3P53784 Gm17229-201ENSMUST00000097355 1138 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
Sox3P53784 1700057G04Rik-201ENSMUST00000098477 1052 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
Sox3P53784 Gm44724-201ENSMUST00000207119 5548 ntTSL 5 BASIC4.45□□□□□ -1.7
Sox3P53784 Gm42645-201ENSMUST00000201573 1627 ntBASIC4.45□□□□□ -1.7
Sox3P53784 Gm5346-201ENSMUST00000056023 2326 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
Sox3P53784 Gm17131-201ENSMUST00000164420 3846 ntBASIC4.45□□□□□ -1.7
Sox3P53784 Herc2-201ENSMUST00000076226 15250 ntAPPRIS P2 TSL 1 (best) BASIC4.45□□□□□ -1.7
Sox3P53784 Gm37936-201ENSMUST00000194647 1322 ntBASIC4.45□□□□□ -1.7
Sox3P53784 Gm45853-201ENSMUST00000212310 3171 ntBASIC4.45□□□□□ -1.7
Sox3P53784 Gm44250-201ENSMUST00000203092 4229 ntBASIC4.45□□□□□ -1.7
Sox3P53784 Gm44433-201ENSMUST00000203540 4832 ntBASIC4.44□□□□□ -1.7
Sox3P53784 Vmn1r185-205ENSMUST00000227461 5318 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
Sox3P53784 Macc1-201ENSMUST00000048880 3818 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
Sox3P53784 Il1rapl1-203ENSMUST00000113966 9133 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
Sox3P53784 Olfr1480-202ENSMUST00000207093 1819 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
Sox3P53784 Olfr1480-204ENSMUST00000207987 1804 ntTSL 3 BASIC4.44□□□□□ -1.7
Sox3P53784 Gm44286-201ENSMUST00000204098 1487 ntBASIC4.44□□□□□ -1.7
Sox3P53784 Ano5-203ENSMUST00000207717 2753 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
Sox3P53784 AC149588.1-201ENSMUST00000228274 3745 ntBASIC4.44□□□□□ -1.7
Sox3P53784 Vmn1r217-203ENSMUST00000228656 9767 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
Sox3P53784 AI987944-202ENSMUST00000205338 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC4.44□□□□□ -1.7
Sox3P53784 Arpp19-203ENSMUST00000166549 1747 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
Sox3P53784 Gm30332-201ENSMUST00000204221 2345 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
Sox3P53784 Gm45235-201ENSMUST00000208016 4465 ntBASIC4.44□□□□□ -1.7
Sox3P53784 Stk31-204ENSMUST00000172459 2922 ntAPPRIS ALT2 TSL 5 BASIC4.44□□□□□ -1.7
Sox3P53784 Gm10256-201ENSMUST00000179404 1358 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
Sox3P53784 Rbm41-202ENSMUST00000087400 2229 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
Sox3P53784 AC154184.1-201ENSMUST00000224375 1620 ntBASIC4.44□□□□□ -1.7
Sox3P53784 4933434E20Rik-201ENSMUST00000029551 3097 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
Sox3P53784 Mir676-201ENSMUST00000102443 89 ntBASIC4.44□□□□□ -1.7
Sox3P53784 Gm24935-201ENSMUST00000103770 110 ntBASIC4.44□□□□□ -1.7
Sox3P53784 Gm24792-201ENSMUST00000104286 128 ntBASIC4.44□□□□□ -1.7
Sox3P53784 Gm11874-201ENSMUST00000117437 130 ntBASIC4.44□□□□□ -1.7
Sox3P53784 Gm14107-201ENSMUST00000117774 330 ntBASIC4.44□□□□□ -1.7
Sox3P53784 Gm15799-201ENSMUST00000120899 289 ntBASIC4.44□□□□□ -1.7
Sox3P53784 Gm13371-201ENSMUST00000137756 469 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
Sox3P53784 Gm11274-201ENSMUST00000146857 481 ntTSL 2 BASIC4.44□□□□□ -1.7
Sox3P53784 Gm28039-201ENSMUST00000149128 254 ntTSL 3 BASIC4.44□□□□□ -1.7
Sox3P53784 Vmn1r-ps45-201ENSMUST00000174106 955 ntBASIC4.44□□□□□ -1.7
Sox3P53784 Gm27242-201ENSMUST00000184211 1151 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
Sox3P53784 Gm27805-201ENSMUST00000184513 79 ntBASIC4.44□□□□□ -1.7
Sox3P53784 Gm27636-201ENSMUST00000184528 122 ntBASIC4.44□□□□□ -1.7
Sox3P53784 Gm29484-201ENSMUST00000186067 324 ntBASIC4.44□□□□□ -1.7
Sox3P53784 Olfr1225-201ENSMUST00000188861 1027 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
Sox3P53784 Gm37741-201ENSMUST00000191768 1256 ntBASIC4.44□□□□□ -1.7
Sox3P53784 Gm10292-202ENSMUST00000193165 585 ntBASIC4.44□□□□□ -1.7
Sox3P53784 Gm35667-201ENSMUST00000199122 711 ntTSL 5 BASIC4.44□□□□□ -1.7
Sox3P53784 Minpp1-ps-201ENSMUST00000203344 946 ntBASIC4.44□□□□□ -1.7
Sox3P53784 Gm32536-201ENSMUST00000205209 445 ntBASIC4.44□□□□□ -1.7
Sox3P53784 Gm45081-201ENSMUST00000206281 572 ntBASIC4.44□□□□□ -1.7
Retrieved 100 of 76,532 protein–RNA pairs in 10.3 ms