Protein–RNA interactions for Protein: P43680

Sox18, Transcription factor SOX-18, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox18P43680 AC124426.2-201ENSMUST00000220886 404 ntTSL 5 BASIC6.41□□□□□ -1.38
Sox18P43680 Gm5457-201ENSMUST00000022260 333 ntBASIC6.41□□□□□ -1.38
Sox18P43680 AC157352.1-201ENSMUST00000222762 303 ntTSL 5 BASIC6.41□□□□□ -1.38
Sox18P43680 Defb11-201ENSMUST00000051965 317 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
Sox18P43680 Olfr937-201ENSMUST00000055567 936 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
Sox18P43680 Gm23412-201ENSMUST00000083017 107 ntBASIC6.41□□□□□ -1.38
Sox18P43680 Gm25482-201ENSMUST00000083225 107 ntBASIC6.41□□□□□ -1.38
Sox18P43680 Gm25126-201ENSMUST00000083343 102 ntBASIC6.41□□□□□ -1.38
Sox18P43680 Mir298-201ENSMUST00000083476 82 ntBASIC6.41□□□□□ -1.38
Sox18P43680 Gm35850-201ENSMUST00000210956 4653 ntTSL 5 BASIC6.41□□□□□ -1.38
Sox18P43680 Gm38416-201ENSMUST00000209648 3565 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
Sox18P43680 Gm37138-201ENSMUST00000194564 2089 ntBASIC6.41□□□□□ -1.38
Sox18P43680 AC158232.1-201ENSMUST00000217882 2071 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
Sox18P43680 Vmn1r44-206ENSMUST00000226760 2070 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
Sox18P43680 Gm42577-201ENSMUST00000201367 3211 ntBASIC6.41□□□□□ -1.38
Sox18P43680 Gm43864-201ENSMUST00000204452 4028 ntBASIC6.41□□□□□ -1.38
Sox18P43680 Gm7145-201ENSMUST00000185381 1794 ntAPPRIS P1 TSL 3 BASIC6.41□□□□□ -1.38
Sox18P43680 1700049E17Rik1-201ENSMUST00000095985 1761 ntAPPRIS P1 TSL 2 BASIC6.41□□□□□ -1.38
Sox18P43680 Gm9403-201ENSMUST00000196299 2181 ntBASIC6.41□□□□□ -1.38
Sox18P43680 Zwint-202ENSMUST00000105431 2676 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
Sox18P43680 Gm10773-201ENSMUST00000218071 3935 ntBASIC6.41□□□□□ -1.38
Sox18P43680 Olfr1366-203ENSMUST00000205976 3112 ntAPPRIS ALT2 TSL 5 BASIC6.41□□□□□ -1.38
Sox18P43680 Gm29297-202ENSMUST00000188186 1499 ntTSL 5 BASIC6.41□□□□□ -1.38
Sox18P43680 Gm44185-201ENSMUST00000204539 3307 ntBASIC6.4□□□□□ -1.38
Sox18P43680 Gm38218-201ENSMUST00000193555 4689 ntBASIC6.4□□□□□ -1.38
Sox18P43680 Dnah10-201ENSMUST00000058440 14038 ntAPPRIS P2 TSL 5 BASIC6.4□□□□□ -1.38
Sox18P43680 Zfp970-202ENSMUST00000108952 1569 ntAPPRIS P1 TSL 2 BASIC6.4□□□□□ -1.38
Sox18P43680 Olfr1166-202ENSMUST00000217575 2004 ntAPPRIS P1 TSL 5 BASIC6.4□□□□□ -1.38
Sox18P43680 A730091E23Rik-201ENSMUST00000221700 3825 ntBASIC6.4□□□□□ -1.38
Sox18P43680 2810021J22Rik-201ENSMUST00000073924 3866 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
Sox18P43680 Vmn2r15-201ENSMUST00000167133 2568 ntAPPRIS P1 TSL 5 BASIC6.4□□□□□ -1.38
Sox18P43680 Gm3962-201ENSMUST00000173027 2587 ntBASIC6.4□□□□□ -1.38
Sox18P43680 Robo2-202ENSMUST00000117200 5988 ntAPPRIS P1 TSL 5 BASIC6.4□□□□□ -1.38
Sox18P43680 Birc6-204ENSMUST00000182133 14604 ntAPPRIS ALT2 TSL 5 BASIC6.4□□□□□ -1.38
Sox18P43680 Birc6-215ENSMUST00000182597 14649 ntAPPRIS ALT2 TSL 1 (best) BASIC6.4□□□□□ -1.38
Sox18P43680 Birc6-220ENSMUST00000182944 14610 ntAPPRIS ALT2 TSL 5 BASIC6.4□□□□□ -1.38
Sox18P43680 Nos2-201ENSMUST00000018610 4192 ntAPPRIS P2 TSL 1 (best) BASIC6.4□□□□□ -1.38
Sox18P43680 Rfc1-201ENSMUST00000172732 4699 ntAPPRIS ALT2 TSL 1 (best) BASIC6.4□□□□□ -1.38
Sox18P43680 Sytl5-202ENSMUST00000086165 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC6.4□□□□□ -1.38
Sox18P43680 Gm4952-201ENSMUST00000092931 2212 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
Sox18P43680 Celf2-204ENSMUST00000114924 8738 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
Sox18P43680 1110008L16Rik-205ENSMUST00000184766 2250 ntAPPRIS P2 TSL 5 BASIC6.4□□□□□ -1.38
Sox18P43680 Gm13550-201ENSMUST00000118185 525 ntBASIC6.4□□□□□ -1.38
Sox18P43680 Gm14669-201ENSMUST00000118841 250 ntBASIC6.4□□□□□ -1.38
Sox18P43680 Gm15781-201ENSMUST00000120216 323 ntBASIC6.4□□□□□ -1.38
Sox18P43680 Olfr404-ps1-201ENSMUST00000121065 972 ntAPPRIS P1 BASIC6.4□□□□□ -1.38
Sox18P43680 Dnah2os-201ENSMUST00000124108 859 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
Sox18P43680 Gm22037-201ENSMUST00000157280 296 ntBASIC6.4□□□□□ -1.38
Sox18P43680 Mir1960-201ENSMUST00000157488 78 ntBASIC6.4□□□□□ -1.38
Sox18P43680 Vmn1r-ps66-201ENSMUST00000173436 612 ntBASIC6.4□□□□□ -1.38
Sox18P43680 Gm20549-201ENSMUST00000174804 429 ntBASIC6.4□□□□□ -1.38
Sox18P43680 Gm27167-201ENSMUST00000183752 511 ntTSL 3 BASIC6.4□□□□□ -1.38
Sox18P43680 Gm27165-201ENSMUST00000183951 232 ntBASIC6.4□□□□□ -1.38
Sox18P43680 Gm29193-201ENSMUST00000187129 830 ntTSL 3 BASIC6.4□□□□□ -1.38
Sox18P43680 Gm28785-201ENSMUST00000187478 379 ntBASIC6.4□□□□□ -1.38
Sox18P43680 Gm5284-201ENSMUST00000199053 903 ntBASIC6.4□□□□□ -1.38
Sox18P43680 Gm43522-202ENSMUST00000200185 442 ntTSL 3 BASIC6.4□□□□□ -1.38
Sox18P43680 Gm43067-201ENSMUST00000201580 445 ntTSL 3 BASIC6.4□□□□□ -1.38
Sox18P43680 Gm43968-201ENSMUST00000203388 389 ntBASIC6.4□□□□□ -1.38
Sox18P43680 Gm7540-201ENSMUST00000219764 926 ntBASIC6.4□□□□□ -1.38
Sox18P43680 AC125531.1-201ENSMUST00000219849 221 ntBASIC6.4□□□□□ -1.38
Sox18P43680 AC154623.1-201ENSMUST00000224348 805 ntBASIC6.4□□□□□ -1.38
Sox18P43680 Gm24695-201ENSMUST00000083877 83 ntBASIC6.4□□□□□ -1.38
Sox18P43680 Gm22865-201ENSMUST00000083949 214 ntBASIC6.4□□□□□ -1.38
Sox18P43680 Rlim-201ENSMUST00000070705 7429 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
Sox18P43680 Slc22a6-201ENSMUST00000010250 4026 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
Sox18P43680 Ripk1-203ENSMUST00000167374 6472 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
Sox18P43680 Grik2-207ENSMUST00000218823 9427 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
Sox18P43680 Pcdhb13-201ENSMUST00000056915 3710 ntAPPRIS P1 BASIC6.4□□□□□ -1.39
Sox18P43680 Zfp78-204ENSMUST00000207347 3883 ntAPPRIS P4 TSL 1 (best) BASIC6.4□□□□□ -1.39
Sox18P43680 Ankrd36-202ENSMUST00000109856 4491 ntAPPRIS P2 TSL 2 BASIC6.4□□□□□ -1.39
Sox18P43680 AC124183.1-201ENSMUST00000222367 2135 ntBASIC6.4□□□□□ -1.39
Sox18P43680 Lncenc1-202ENSMUST00000179324 2764 ntTSL 2 BASIC6.4□□□□□ -1.39
Sox18P43680 Gm38120-201ENSMUST00000195506 4642 ntBASIC6.4□□□□□ -1.39
Sox18P43680 Zc3h12b-201ENSMUST00000082183 2831 ntAPPRIS P1 TSL 5 BASIC6.4□□□□□ -1.39
Sox18P43680 AC135119.1-202ENSMUST00000228435 2203 ntBASIC6.4□□□□□ -1.39
Sox18P43680 Gm18163-201ENSMUST00000197877 1643 ntBASIC6.39□□□□□ -1.39
Sox18P43680 Nxpe4-203ENSMUST00000216998 4871 ntAPPRIS ALT2 TSL 2 BASIC6.39□□□□□ -1.39
Sox18P43680 Tlr11-201ENSMUST00000063570 2993 ntAPPRIS ALT2 BASIC6.39□□□□□ -1.39
Sox18P43680 Mtrr-201ENSMUST00000045827 3692 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
Sox18P43680 Pramel4-202ENSMUST00000091676 2399 ntAPPRIS P2 TSL 1 (best) BASIC6.39□□□□□ -1.39
Sox18P43680 Olfr1242-203ENSMUST00000143935 2406 ntAPPRIS P1 TSL 5 BASIC6.39□□□□□ -1.39
Sox18P43680 A330058E17Rik-201ENSMUST00000200757 3890 ntBASIC6.39□□□□□ -1.39
Sox18P43680 Zfp27-201ENSMUST00000053521 3150 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
Sox18P43680 Gm18796-201ENSMUST00000190440 1767 ntBASIC6.39□□□□□ -1.39
Sox18P43680 Trpm7-201ENSMUST00000028843 6985 ntAPPRIS ALT1 TSL 1 (best) BASIC6.39□□□□□ -1.39
Sox18P43680 Gm37056-201ENSMUST00000192141 1865 ntBASIC6.39□□□□□ -1.39
Sox18P43680 Nt5c1b-205ENSMUST00000217944 1975 ntAPPRIS ALT2 TSL 5 BASIC6.39□□□□□ -1.39
Sox18P43680 AC164437.5-201ENSMUST00000227235 4414 ntBASIC6.39□□□□□ -1.39
Sox18P43680 Gm42397-201ENSMUST00000207472 2002 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Sox18P43680 Olfr1340-204ENSMUST00000217334 2001 ntAPPRIS P1 TSL 3 BASIC6.39□□□□□ -1.39
Sox18P43680 Tek-202ENSMUST00000073939 4549 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Sox18P43680 Dnah17-204ENSMUST00000132685 13612 ntAPPRIS ALT2 TSL 5 BASIC6.39□□□□□ -1.39
Sox18P43680 Olfr1555-ps1-202ENSMUST00000219261 2918 ntAPPRIS P1 TSL 5 BASIC6.39□□□□□ -1.39
Sox18P43680 Trav14-3-201ENSMUST00000103589 384 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
Sox18P43680 Olfr407-ps1-201ENSMUST00000117794 866 ntBASIC6.39□□□□□ -1.39
Sox18P43680 Gm12901-201ENSMUST00000118690 532 ntBASIC6.39□□□□□ -1.39
Sox18P43680 Gm12768-201ENSMUST00000120055 759 ntBASIC6.39□□□□□ -1.39
Sox18P43680 Gm11504-201ENSMUST00000120211 173 ntBASIC6.39□□□□□ -1.39
Sox18P43680 Gm3810-201ENSMUST00000122413 476 ntBASIC6.39□□□□□ -1.39
Retrieved 100 of 76,532 protein–RNA pairs in 60.7 ms