Protein–RNA interactions for Protein: P18111

Cdx1, Homeobox protein CDX-1, mousemouse

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx1P18111 Vmn1r89-203ENSMUST00000227176 4189 ntAPPRIS P2 BASIC3.93□□□□□ -1.78
Cdx1P18111 Vmn1r172-201ENSMUST00000038694 9009 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
Cdx1P18111 Olfr905-202ENSMUST00000214377 4429 ntAPPRIS P1 TSL 5 BASIC3.93□□□□□ -1.78
Cdx1P18111 Trbv26-201ENSMUST00000103280 344 ntAPPRIS ALT2 BASIC3.93□□□□□ -1.78
Cdx1P18111 Tcrg-V3-201ENSMUST00000103559 350 ntAPPRIS ALT2 BASIC3.93□□□□□ -1.78
Cdx1P18111 n-R5s82-201ENSMUST00000104213 109 ntBASIC3.93□□□□□ -1.78
Cdx1P18111 Gm14086-201ENSMUST00000117152 173 ntBASIC3.93□□□□□ -1.78
Cdx1P18111 Gm7834-201ENSMUST00000117560 437 ntBASIC3.93□□□□□ -1.78
Cdx1P18111 Gm14541-201ENSMUST00000118985 157 ntBASIC3.93□□□□□ -1.78
Cdx1P18111 Gm11631-201ENSMUST00000119220 156 ntBASIC3.93□□□□□ -1.78
Cdx1P18111 Gm13459-201ENSMUST00000121558 646 ntBASIC3.93□□□□□ -1.78
Cdx1P18111 Gm15212-201ENSMUST00000122403 466 ntBASIC3.93□□□□□ -1.78
Cdx1P18111 Gm13874-201ENSMUST00000130680 809 ntTSL 5 BASIC3.93□□□□□ -1.78
Cdx1P18111 4933416E14Rik-201ENSMUST00000130841 491 ntBASIC3.93□□□□□ -1.78
Cdx1P18111 Gm11846-201ENSMUST00000155156 515 ntTSL 2 BASIC3.93□□□□□ -1.78
Cdx1P18111 Gm26371-201ENSMUST00000157829 104 ntBASIC3.93□□□□□ -1.78
Cdx1P18111 Gm15812-201ENSMUST00000162331 748 ntBASIC3.93□□□□□ -1.78
Cdx1P18111 Olfr723-201ENSMUST00000164157 1006 ntAPPRIS P1 BASIC3.93□□□□□ -1.78
Cdx1P18111 Gm2950-201ENSMUST00000185530 520 ntBASIC3.93□□□□□ -1.78
Cdx1P18111 1700057G04Rik-206ENSMUST00000185580 842 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
Cdx1P18111 Gm28083-201ENSMUST00000186533 538 ntTSL 5 BASIC3.93□□□□□ -1.78
Cdx1P18111 Gm28847-201ENSMUST00000186778 700 ntBASIC3.93□□□□□ -1.78
Cdx1P18111 Gm30097-201ENSMUST00000193581 447 ntTSL 5 BASIC3.93□□□□□ -1.78
Cdx1P18111 Gm2053-201ENSMUST00000195671 631 ntBASIC3.93□□□□□ -1.78
Cdx1P18111 Gm43941-201ENSMUST00000203303 1073 ntBASIC3.93□□□□□ -1.78
Cdx1P18111 Olfr723-202ENSMUST00000206058 1078 ntAPPRIS P1 TSL 3 BASIC3.93□□□□□ -1.78
Cdx1P18111 1700095K22Rik-201ENSMUST00000206808 282 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
Cdx1P18111 Olfr206-202ENSMUST00000207927 1122 ntAPPRIS P1 TSL 5 BASIC3.93□□□□□ -1.78
Cdx1P18111 Olfr153-201ENSMUST00000217113 1258 ntAPPRIS P1 BASIC3.93□□□□□ -1.78
Cdx1P18111 Gm30262-201ENSMUST00000219137 791 ntTSL 5 BASIC3.93□□□□□ -1.78
Cdx1P18111 AC138290.1-201ENSMUST00000219242 820 ntTSL 5 BASIC3.93□□□□□ -1.78
Cdx1P18111 2900092C05Rik-201ENSMUST00000032541 887 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
Cdx1P18111 C130073F10Rik-201ENSMUST00000051043 913 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
Cdx1P18111 Gm4963-201ENSMUST00000072718 378 ntBASIC3.93□□□□□ -1.78
Cdx1P18111 Olfr724-201ENSMUST00000075030 1006 ntAPPRIS P1 BASIC3.93□□□□□ -1.78
Cdx1P18111 Gm22456-201ENSMUST00000082578 125 ntBASIC3.93□□□□□ -1.78
Cdx1P18111 Mir215-201ENSMUST00000083628 112 ntBASIC3.93□□□□□ -1.78
Cdx1P18111 Vmn1r203-201ENSMUST00000091729 936 ntAPPRIS P1 BASIC3.93□□□□□ -1.78
Cdx1P18111 Vmn1r174-202ENSMUST00000228331 9058 ntAPPRIS P1 BASIC3.93□□□□□ -1.78
Cdx1P18111 Gm37742-201ENSMUST00000193263 3979 ntBASIC3.93□□□□□ -1.78
Cdx1P18111 AC154329.1-201ENSMUST00000224408 3129 ntBASIC3.93□□□□□ -1.78
Cdx1P18111 Olfr570-202ENSMUST00000209778 1423 ntAPPRIS P1 TSL 5 BASIC3.93□□□□□ -1.78
Cdx1P18111 Cep290-206ENSMUST00000219765 7985 ntTSL 5 BASIC3.93□□□□□ -1.78
Cdx1P18111 Vmn2r-ps128-201ENSMUST00000176367 2570 ntBASIC3.93□□□□□ -1.78
Cdx1P18111 Gm43888-201ENSMUST00000204405 2587 ntBASIC3.93□□□□□ -1.78
Cdx1P18111 Gm42949-201ENSMUST00000197054 2202 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
Cdx1P18111 Gm26853-201ENSMUST00000180757 4010 ntTSL 5 BASIC3.92□□□□□ -1.78
Cdx1P18111 Cd226-201ENSMUST00000037142 2357 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
Cdx1P18111 Olfr616-203ENSMUST00000217293 1627 ntAPPRIS P1 TSL 5 BASIC3.92□□□□□ -1.78
Cdx1P18111 Nlrp4g-201ENSMUST00000067621 2030 ntBASIC3.92□□□□□ -1.78
Cdx1P18111 Gm43266-201ENSMUST00000201049 1771 ntBASIC3.92□□□□□ -1.78
Cdx1P18111 Vmn2r110-201ENSMUST00000169559 2577 ntAPPRIS P1 TSL 5 BASIC3.92□□□□□ -1.78
Cdx1P18111 Olfr711-202ENSMUST00000207200 2966 ntAPPRIS P1 TSL 2 BASIC3.92□□□□□ -1.78
Cdx1P18111 Gm10441-201ENSMUST00000200950 1546 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
Cdx1P18111 Gm44860-201ENSMUST00000208473 2346 ntBASIC3.92□□□□□ -1.78
Cdx1P18111 Gm37345-201ENSMUST00000193062 3138 ntBASIC3.92□□□□□ -1.78
Cdx1P18111 Gm37412-201ENSMUST00000194866 4321 ntBASIC3.92□□□□□ -1.78
Cdx1P18111 Gm13103-202ENSMUST00000105768 994 ntAPPRIS ALT2 TSL 2 BASIC3.92□□□□□ -1.78
Cdx1P18111 Gm15933-201ENSMUST00000117215 616 ntBASIC3.92□□□□□ -1.78
Cdx1P18111 Gm14620-201ENSMUST00000120656 383 ntBASIC3.92□□□□□ -1.78
Cdx1P18111 Vmn1r-ps135-201ENSMUST00000120909 595 ntBASIC3.92□□□□□ -1.78
Cdx1P18111 Gm11759-201ENSMUST00000121742 464 ntBASIC3.92□□□□□ -1.78
Cdx1P18111 Llph-ps2-201ENSMUST00000122000 393 ntBASIC3.92□□□□□ -1.78
Cdx1P18111 Gm13610-201ENSMUST00000128298 951 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
Cdx1P18111 Gm11381-201ENSMUST00000138574 420 ntTSL 5 BASIC3.92□□□□□ -1.78
Cdx1P18111 Gm12226-201ENSMUST00000144172 876 ntBASIC3.92□□□□□ -1.78
Cdx1P18111 5730412P04Rik-201ENSMUST00000147100 1149 ntTSL 5 BASIC3.92□□□□□ -1.78
Cdx1P18111 Nr6a1os-202ENSMUST00000151229 525 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
Cdx1P18111 Gm11507-201ENSMUST00000156462 412 ntBASIC3.92□□□□□ -1.78
Cdx1P18111 Gm9890-201ENSMUST00000171867 537 ntBASIC3.92□□□□□ -1.78
Cdx1P18111 1700116B05Rik-201ENSMUST00000173461 414 ntTSL 2 BASIC3.92□□□□□ -1.78
Cdx1P18111 Gm20663-201ENSMUST00000176647 474 ntTSL 3 BASIC3.92□□□□□ -1.78
Cdx1P18111 C920009B18Rik-203ENSMUST00000181643 1004 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
Cdx1P18111 Mir6238-201ENSMUST00000184140 129 ntBASIC3.92□□□□□ -1.78
Cdx1P18111 9430037O13Rik-201ENSMUST00000192556 1008 ntBASIC3.92□□□□□ -1.78
Cdx1P18111 7420461P10Rik-203ENSMUST00000193898 545 ntAPPRIS ALT2 TSL 3 BASIC3.92□□□□□ -1.78
Cdx1P18111 Trav7d-5-201ENSMUST00000197128 340 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
Cdx1P18111 Gm42502-201ENSMUST00000198550 1089 ntBASIC3.92□□□□□ -1.78
Cdx1P18111 Igkv12-40-201ENSMUST00000199208 347 ntBASIC3.92□□□□□ -1.78
Cdx1P18111 Trav7n-5-201ENSMUST00000199753 340 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
Cdx1P18111 Gm44876-201ENSMUST00000205394 670 ntTSL 3 BASIC3.92□□□□□ -1.78
Cdx1P18111 Gm45502-201ENSMUST00000209561 252 ntTSL 3 BASIC3.92□□□□□ -1.78
Cdx1P18111 AC160863.2-201ENSMUST00000218392 858 ntTSL 5 BASIC3.92□□□□□ -1.78
Cdx1P18111 Gm19599-201ENSMUST00000218898 358 ntBASIC3.92□□□□□ -1.78
Cdx1P18111 Gm34215-202ENSMUST00000223024 492 ntTSL 5 BASIC3.92□□□□□ -1.78
Cdx1P18111 Gm18441-201ENSMUST00000223539 617 ntBASIC3.92□□□□□ -1.78
Cdx1P18111 CT030182.2-201ENSMUST00000223569 620 ntBASIC3.92□□□□□ -1.78
Cdx1P18111 AC124549.1-201ENSMUST00000225912 333 ntBASIC3.92□□□□□ -1.78
Cdx1P18111 AC154335.2-201ENSMUST00000225916 638 ntBASIC3.92□□□□□ -1.78
Cdx1P18111 AC125539.2-202ENSMUST00000227983 587 ntBASIC3.92□□□□□ -1.78
Cdx1P18111 AC155237.2-201ENSMUST00000228487 478 ntBASIC3.92□□□□□ -1.78
Cdx1P18111 Smr3a-201ENSMUST00000031211 635 ntAPPRIS P2 TSL 1 (best) BASIC3.92□□□□□ -1.78
Cdx1P18111 Olfr273-201ENSMUST00000051520 1059 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
Cdx1P18111 Hamp-201ENSMUST00000062620 410 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
Cdx1P18111 Olfr640-201ENSMUST00000084799 945 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
Cdx1P18111 Gm9386-201ENSMUST00000095195 381 ntBASIC3.92□□□□□ -1.78
Cdx1P18111 Dnah7c-204ENSMUST00000189749 12207 ntAPPRIS P1 TSL 5 BASIC3.92□□□□□ -1.78
Cdx1P18111 Gm42494-201ENSMUST00000196515 3051 ntBASIC3.92□□□□□ -1.78
Cdx1P18111 AC091683.1-201ENSMUST00000222307 2446 ntBASIC3.92□□□□□ -1.78
Cdx1P18111 Zfp808-201ENSMUST00000099449 2571 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
Retrieved 100 of 76,532 protein–RNA pairs in 162.3 ms