Protein–RNA interactions for Protein: Q8R1F9

Rpp40, Ribonuclease P protein subunit p40, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpp40Q8R1F9 Gm8356-202ENSMUST00000164917 984 ntAPPRIS ALT2 TSL 5 BASIC5.07□□□□□ -1.6
Rpp40Q8R1F9 Gm17066-202ENSMUST00000165350 1113 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
Rpp40Q8R1F9 Gm17152-201ENSMUST00000172430 535 ntBASIC5.07□□□□□ -1.6
Rpp40Q8R1F9 Mir7022-201ENSMUST00000183749 61 ntBASIC5.07□□□□□ -1.6
Rpp40Q8R1F9 1700060O08Rik-201ENSMUST00000185390 281 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
Rpp40Q8R1F9 Gm4412-201ENSMUST00000186660 433 ntBASIC5.07□□□□□ -1.6
Rpp40Q8R1F9 Gm23925-202ENSMUST00000188429 132 ntBASIC5.07□□□□□ -1.6
Rpp40Q8R1F9 Gm3145-201ENSMUST00000188584 220 ntBASIC5.07□□□□□ -1.6
Rpp40Q8R1F9 Gm20776-201ENSMUST00000189940 700 ntBASIC5.07□□□□□ -1.6
Rpp40Q8R1F9 Gm29138-201ENSMUST00000191444 348 ntBASIC5.07□□□□□ -1.6
Rpp40Q8R1F9 Gm18382-201ENSMUST00000194394 582 ntBASIC5.07□□□□□ -1.6
Rpp40Q8R1F9 Gm9238-201ENSMUST00000196181 329 ntBASIC5.07□□□□□ -1.6
Rpp40Q8R1F9 Gm2522-201ENSMUST00000204280 322 ntBASIC5.07□□□□□ -1.6
Rpp40Q8R1F9 Klk1b23-ps-201ENSMUST00000206347 345 ntBASIC5.07□□□□□ -1.6
Rpp40Q8R1F9 Gm45474-201ENSMUST00000209471 408 ntBASIC5.07□□□□□ -1.6
Rpp40Q8R1F9 Gm19096-201ENSMUST00000209705 766 ntBASIC5.07□□□□□ -1.6
Rpp40Q8R1F9 Gm8748-201ENSMUST00000211125 587 ntBASIC5.07□□□□□ -1.6
Rpp40Q8R1F9 AC123064.2-201ENSMUST00000217758 193 ntBASIC5.07□□□□□ -1.6
Rpp40Q8R1F9 Gm18039-201ENSMUST00000217816 728 ntBASIC5.07□□□□□ -1.6
Rpp40Q8R1F9 AC113204.1-202ENSMUST00000219846 578 ntTSL 3 BASIC5.07□□□□□ -1.6
Rpp40Q8R1F9 AC164116.1-201ENSMUST00000225810 622 ntBASIC5.07□□□□□ -1.6
Rpp40Q8R1F9 Spata19-201ENSMUST00000034473 697 ntAPPRIS P2 TSL 1 (best) BASIC5.07□□□□□ -1.6
Rpp40Q8R1F9 Olfr827-201ENSMUST00000058123 1058 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
Rpp40Q8R1F9 Mup14-201ENSMUST00000071005 652 ntAPPRIS P1 TSL 2 BASIC5.07□□□□□ -1.6
Rpp40Q8R1F9 Vmn1r49-201ENSMUST00000071865 933 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
Rpp40Q8R1F9 BC023105-201ENSMUST00000073997 1227 ntBASIC5.07□□□□□ -1.6
Rpp40Q8R1F9 Gm14399-201ENSMUST00000099029 192 ntTSL 5 BASIC5.07□□□□□ -1.6
Rpp40Q8R1F9 Olfr827-202ENSMUST00000213568 8457 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
Rpp40Q8R1F9 Il1rapl1-203ENSMUST00000113966 9133 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
Rpp40Q8R1F9 Msr1-202ENSMUST00000170091 3636 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
Rpp40Q8R1F9 Gm6300-201ENSMUST00000192393 1498 ntBASIC5.07□□□□□ -1.6
Rpp40Q8R1F9 Dst-215ENSMUST00000185269 16340 ntTSL 5 BASIC5.06□□□□□ -1.6
Rpp40Q8R1F9 4930402F11Rik-204ENSMUST00000208612 1405 ntTSL 5 BASIC5.06□□□□□ -1.6
Rpp40Q8R1F9 9430007A20Rik-201ENSMUST00000030328 1406 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
Rpp40Q8R1F9 Olfr676-204ENSMUST00000219602 2802 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
Rpp40Q8R1F9 Olfr733-202ENSMUST00000214372 3530 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
Rpp40Q8R1F9 Olfr1331-203ENSMUST00000216589 3139 ntAPPRIS ALT2 TSL 5 BASIC5.06□□□□□ -1.6
Rpp40Q8R1F9 Tgif1-202ENSMUST00000118283 1388 ntAPPRIS ALT1 TSL 1 (best) BASIC5.06□□□□□ -1.6
Rpp40Q8R1F9 Slc22a30-202ENSMUST00000096269 2255 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
Rpp40Q8R1F9 Gm12520-201ENSMUST00000117493 316 ntBASIC5.06□□□□□ -1.6
Rpp40Q8R1F9 Vmn1r-ps126-201ENSMUST00000117681 926 ntBASIC5.06□□□□□ -1.6
Rpp40Q8R1F9 Gm15981-201ENSMUST00000119196 457 ntBASIC5.06□□□□□ -1.6
Rpp40Q8R1F9 Gm13745-201ENSMUST00000121994 527 ntBASIC5.06□□□□□ -1.6
Rpp40Q8R1F9 2210408F21Rik-202ENSMUST00000124811 384 ntTSL 2 BASIC5.06□□□□□ -1.6
Rpp40Q8R1F9 Rrm2b-203ENSMUST00000137636 900 ntTSL 5 BASIC5.06□□□□□ -1.6
Rpp40Q8R1F9 Gm14368-201ENSMUST00000145305 415 ntBASIC5.06□□□□□ -1.6
Rpp40Q8R1F9 Gm13632-201ENSMUST00000150119 384 ntTSL 5 BASIC5.06□□□□□ -1.6
Rpp40Q8R1F9 Gm22819-201ENSMUST00000157445 303 ntBASIC5.06□□□□□ -1.6
Rpp40Q8R1F9 Gm4134-201ENSMUST00000173244 563 ntBASIC5.06□□□□□ -1.6
Rpp40Q8R1F9 Mir6943-201ENSMUST00000185186 66 ntBASIC5.06□□□□□ -1.6
Rpp40Q8R1F9 Mrgprc1-ps-201ENSMUST00000185552 952 ntBASIC5.06□□□□□ -1.6
Rpp40Q8R1F9 Gm29020-201ENSMUST00000191166 290 ntTSL 5 BASIC5.06□□□□□ -1.6
Rpp40Q8R1F9 AC136146.1-201ENSMUST00000196180 91 ntBASIC5.06□□□□□ -1.6
Rpp40Q8R1F9 Igkv12-47-201ENSMUST00000196961 356 ntBASIC5.06□□□□□ -1.6
Rpp40Q8R1F9 Traj59-202ENSMUST00000197589 62 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
Rpp40Q8R1F9 Gm42663-201ENSMUST00000199883 351 ntBASIC5.06□□□□□ -1.6
Rpp40Q8R1F9 AC120011.1-201ENSMUST00000202147 744 ntBASIC5.06□□□□□ -1.6
Rpp40Q8R1F9 Gm19761-201ENSMUST00000205372 391 ntBASIC5.06□□□□□ -1.6
Rpp40Q8R1F9 Gm45032-201ENSMUST00000205375 520 ntBASIC5.06□□□□□ -1.6
Rpp40Q8R1F9 Gm45052-201ENSMUST00000206457 405 ntTSL 2 BASIC5.06□□□□□ -1.6
Rpp40Q8R1F9 Gm18258-201ENSMUST00000210413 542 ntBASIC5.06□□□□□ -1.6
Rpp40Q8R1F9 Gm45830-201ENSMUST00000212945 344 ntTSL 5 BASIC5.06□□□□□ -1.6
Rpp40Q8R1F9 AC173345.3-201ENSMUST00000221245 1093 ntBASIC5.06□□□□□ -1.6
Rpp40Q8R1F9 Gm17915-201ENSMUST00000222077 548 ntBASIC5.06□□□□□ -1.6
Rpp40Q8R1F9 1700011B04Rik-211ENSMUST00000222690 394 ntTSL 5 BASIC5.06□□□□□ -1.6
Rpp40Q8R1F9 AC107369.1-201ENSMUST00000227373 860 ntBASIC5.06□□□□□ -1.6
Rpp40Q8R1F9 Olfr482-201ENSMUST00000081184 972 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
Rpp40Q8R1F9 Gm23102-201ENSMUST00000083724 116 ntBASIC5.06□□□□□ -1.6
Rpp40Q8R1F9 Gm6177-201ENSMUST00000085589 465 ntBASIC5.06□□□□□ -1.6
Rpp40Q8R1F9 Cnot4-203ENSMUST00000114993 3473 ntAPPRIS P4 TSL 1 (best) BASIC5.06□□□□□ -1.6
Rpp40Q8R1F9 Gm26582-201ENSMUST00000181481 3135 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
Rpp40Q8R1F9 Skint4-201ENSMUST00000069769 3367 ntAPPRIS ALT2 TSL 2 BASIC5.06□□□□□ -1.6
Rpp40Q8R1F9 Xiap-202ENSMUST00000055483 6374 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
Rpp40Q8R1F9 Gm44027-201ENSMUST00000203419 3480 ntBASIC5.06□□□□□ -1.6
Rpp40Q8R1F9 Lrp1b-208ENSMUST00000167270 10071 ntTSL 5 BASIC5.06□□□□□ -1.6
Rpp40Q8R1F9 Lin28b-201ENSMUST00000079390 5402 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
Rpp40Q8R1F9 Gm20541-201ENSMUST00000173035 1406 ntBASIC5.06□□□□□ -1.6
Rpp40Q8R1F9 4933436I01Rik-201ENSMUST00000026325 1426 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
Rpp40Q8R1F9 Spef2-206ENSMUST00000208854 7038 ntAPPRIS ALT2 TSL 5 BASIC5.05□□□□□ -1.6
Rpp40Q8R1F9 1700017N19Rik-201ENSMUST00000041162 1691 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
Rpp40Q8R1F9 Hnmt-201ENSMUST00000051416 1656 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
Rpp40Q8R1F9 Olfr1252-202ENSMUST00000213196 3331 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
Rpp40Q8R1F9 Vmn1r81-204ENSMUST00000228482 13495 ntAPPRIS ALT2 BASIC5.05□□□□□ -1.6
Rpp40Q8R1F9 Gm19619-201ENSMUST00000200707 3201 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
Rpp40Q8R1F9 Fbxl13-202ENSMUST00000115234 2143 ntTSL 5 BASIC5.05□□□□□ -1.6
Rpp40Q8R1F9 Akr1c14-202ENSMUST00000118717 3183 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
Rpp40Q8R1F9 Tnfrsf26-201ENSMUST00000055723 3107 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
Rpp40Q8R1F9 Zfp119b-202ENSMUST00000189452 2078 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
Rpp40Q8R1F9 Acsl4-204ENSMUST00000112907 5137 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
Rpp40Q8R1F9 Traj7-201ENSMUST00000103733 59 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
Rpp40Q8R1F9 Gm25537-201ENSMUST00000103851 109 ntBASIC5.05□□□□□ -1.6
Rpp40Q8R1F9 Gm24855-201ENSMUST00000104848 97 ntBASIC5.05□□□□□ -1.6
Rpp40Q8R1F9 Gm15206-201ENSMUST00000119143 454 ntBASIC5.05□□□□□ -1.6
Rpp40Q8R1F9 Gm15738-201ENSMUST00000131985 275 ntTSL 5 BASIC5.05□□□□□ -1.6
Rpp40Q8R1F9 Gm15591-201ENSMUST00000138539 627 ntTSL 5 BASIC5.05□□□□□ -1.6
Rpp40Q8R1F9 Gm13219-202ENSMUST00000152599 685 ntTSL 3 BASIC5.05□□□□□ -1.6
Rpp40Q8R1F9 Gm24251-201ENSMUST00000157324 114 ntBASIC5.05□□□□□ -1.6
Rpp40Q8R1F9 Gm24751-201ENSMUST00000157844 102 ntBASIC5.05□□□□□ -1.6
Rpp40Q8R1F9 Gm23179-201ENSMUST00000158693 304 ntBASIC5.05□□□□□ -1.6
Rpp40Q8R1F9 Gm18415-201ENSMUST00000177464 647 ntBASIC5.05□□□□□ -1.6
Retrieved 100 of 76,532 protein–RNA pairs in 75.8 ms