Protein–RNA interactions for Protein: Q69ZI1

Sh3rf1, E3 ubiquitin-protein ligase SH3RF1, mousemouse

Predictions only

Length 892 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf1Q69ZI1 Obox4-ps23-201ENSMUST00000175738 1137 ntBASIC6.03□□□□□ -1.44
Sh3rf1Q69ZI1 Gm21560-202ENSMUST00000177670 618 ntAPPRIS ALT2 TSL 5 BASIC6.03□□□□□ -1.44
Sh3rf1Q69ZI1 Gm25065-201ENSMUST00000177914 132 ntBASIC6.03□□□□□ -1.44
Sh3rf1Q69ZI1 Gm9602-202ENSMUST00000177973 615 ntAPPRIS ALT2 TSL 5 BASIC6.03□□□□□ -1.44
Sh3rf1Q69ZI1 Gm21732-201ENSMUST00000179309 1083 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
Sh3rf1Q69ZI1 Gm21773-201ENSMUST00000179355 1083 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
Sh3rf1Q69ZI1 Obox4-ps22-201ENSMUST00000179602 1137 ntBASIC6.03□□□□□ -1.44
Sh3rf1Q69ZI1 Gm21921-201ENSMUST00000180040 1083 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
Sh3rf1Q69ZI1 Gm25891-201ENSMUST00000180050 132 ntBASIC6.03□□□□□ -1.44
Sh3rf1Q69ZI1 Mir6481-201ENSMUST00000184617 110 ntBASIC6.03□□□□□ -1.44
Sh3rf1Q69ZI1 Gm28078-201ENSMUST00000190381 874 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
Sh3rf1Q69ZI1 Gm43652-201ENSMUST00000196219 675 ntBASIC6.03□□□□□ -1.44
Sh3rf1Q69ZI1 4930512P04Rik-201ENSMUST00000197000 424 ntBASIC6.03□□□□□ -1.44
Sh3rf1Q69ZI1 Gm44403-201ENSMUST00000198554 129 ntBASIC6.03□□□□□ -1.44
Sh3rf1Q69ZI1 Gm32754-201ENSMUST00000199442 257 ntTSL 5 BASIC6.03□□□□□ -1.44
Sh3rf1Q69ZI1 Gm5306-201ENSMUST00000203325 757 ntBASIC6.03□□□□□ -1.44
Sh3rf1Q69ZI1 Gm44818-201ENSMUST00000206608 358 ntBASIC6.03□□□□□ -1.44
Sh3rf1Q69ZI1 Noxred1-201ENSMUST00000021423 1101 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
Sh3rf1Q69ZI1 AC154296.2-201ENSMUST00000214696 545 ntBASIC6.03□□□□□ -1.44
Sh3rf1Q69ZI1 Nqo2-201ENSMUST00000021843 1063 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
Sh3rf1Q69ZI1 AC155941.1-201ENSMUST00000220223 529 ntBASIC6.03□□□□□ -1.44
Sh3rf1Q69ZI1 AC132954.1-201ENSMUST00000221017 342 ntBASIC6.03□□□□□ -1.44
Sh3rf1Q69ZI1 AC163743.1-201ENSMUST00000224309 270 ntBASIC6.03□□□□□ -1.44
Sh3rf1Q69ZI1 AL606472.1-201ENSMUST00000224628 275 ntBASIC6.03□□□□□ -1.44
Sh3rf1Q69ZI1 AC166105.1-201ENSMUST00000227512 482 ntBASIC6.03□□□□□ -1.44
Sh3rf1Q69ZI1 AC166574.7-201ENSMUST00000228502 704 ntBASIC6.03□□□□□ -1.44
Sh3rf1Q69ZI1 Gm22810-201ENSMUST00000082741 158 ntBASIC6.03□□□□□ -1.44
Sh3rf1Q69ZI1 Gm7995-201ENSMUST00000089789 429 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
Sh3rf1Q69ZI1 A730009L09Rik-201ENSMUST00000209558 2512 ntAPPRIS P5 TSL 1 (best) BASIC6.03□□□□□ -1.44
Sh3rf1Q69ZI1 Zan-201ENSMUST00000117564 16481 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
Sh3rf1Q69ZI1 Tmprss15-201ENSMUST00000023566 4177 ntAPPRIS P3 TSL 1 (best) BASIC6.03□□□□□ -1.44
Sh3rf1Q69ZI1 Rapgef6-204ENSMUST00000108894 3475 ntTSL 5 BASIC6.03□□□□□ -1.44
Sh3rf1Q69ZI1 Rc3h1-201ENSMUST00000035911 3476 ntAPPRIS ALT2 TSL 5 BASIC6.03□□□□□ -1.44
Sh3rf1Q69ZI1 Gm45562-201ENSMUST00000210015 1537 ntBASIC6.03□□□□□ -1.44
Sh3rf1Q69ZI1 Serpinb11-201ENSMUST00000027566 2084 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
Sh3rf1Q69ZI1 Gm38278-201ENSMUST00000194715 1365 ntBASIC6.03□□□□□ -1.44
Sh3rf1Q69ZI1 Gm11290-204ENSMUST00000224688 3042 ntBASIC6.03□□□□□ -1.44
Sh3rf1Q69ZI1 Olfr1342-202ENSMUST00000216226 3269 ntAPPRIS P1 TSL 2 BASIC6.03□□□□□ -1.44
Sh3rf1Q69ZI1 Gm37101-201ENSMUST00000191656 3660 ntBASIC6.03□□□□□ -1.44
Sh3rf1Q69ZI1 Olfr1065-204ENSMUST00000217586 2174 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
Sh3rf1Q69ZI1 Gm42510-201ENSMUST00000196470 2258 ntBASIC6.02□□□□□ -1.44
Sh3rf1Q69ZI1 Olfr736-205ENSMUST00000215263 2255 ntAPPRIS P1 TSL 5 BASIC6.02□□□□□ -1.44
Sh3rf1Q69ZI1 Tead1-202ENSMUST00000069256 9480 ntAPPRIS ALT1 TSL 1 (best) BASIC6.02□□□□□ -1.45
Sh3rf1Q69ZI1 Ccr9-203ENSMUST00000166236 5197 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
Sh3rf1Q69ZI1 Gm38142-201ENSMUST00000194093 3555 ntBASIC6.02□□□□□ -1.45
Sh3rf1Q69ZI1 AC140299.2-201ENSMUST00000219546 1969 ntBASIC6.02□□□□□ -1.45
Sh3rf1Q69ZI1 Gm26994-201ENSMUST00000182027 1571 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
Sh3rf1Q69ZI1 Gm21693-202ENSMUST00000186047 1576 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
Sh3rf1Q69ZI1 Gm3376-202ENSMUST00000186140 1576 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
Sh3rf1Q69ZI1 Gm21704-202ENSMUST00000187277 1576 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
Sh3rf1Q69ZI1 Gm10352-202ENSMUST00000187842 1576 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
Sh3rf1Q69ZI1 Gm21677-202ENSMUST00000189592 1576 ntAPPRIS P1 TSL 5 BASIC6.02□□□□□ -1.45
Sh3rf1Q69ZI1 Olfr969-202ENSMUST00000213266 1597 ntAPPRIS P1 TSL 2 BASIC6.02□□□□□ -1.45
Sh3rf1Q69ZI1 AC160115.1-201ENSMUST00000224678 1574 ntBASIC6.02□□□□□ -1.45
Sh3rf1Q69ZI1 Mbnl1-207ENSMUST00000192607 4552 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
Sh3rf1Q69ZI1 Gm16513-202ENSMUST00000201663 2485 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
Sh3rf1Q69ZI1 Vmn2r120-201ENSMUST00000165781 2571 ntAPPRIS P1 TSL 5 BASIC6.02□□□□□ -1.45
Sh3rf1Q69ZI1 Olfr1065-201ENSMUST00000213789 2154 ntAPPRIS P1 TSL 3 BASIC6.02□□□□□ -1.45
Sh3rf1Q69ZI1 CT025686.2-201ENSMUST00000227898 3315 ntBASIC6.02□□□□□ -1.45
Sh3rf1Q69ZI1 Trbv13-2-201ENSMUST00000103270 340 ntAPPRIS P1 BASIC6.02□□□□□ -1.45
Sh3rf1Q69ZI1 Trav6-6-201ENSMUST00000103584 344 ntAPPRIS P1 BASIC6.02□□□□□ -1.45
Sh3rf1Q69ZI1 Trav6n-5-201ENSMUST00000103611 338 ntAPPRIS P1 BASIC6.02□□□□□ -1.45
Sh3rf1Q69ZI1 Gm22656-201ENSMUST00000104199 171 ntBASIC6.02□□□□□ -1.45
Sh3rf1Q69ZI1 Gm25917-201ENSMUST00000104267 130 ntBASIC6.02□□□□□ -1.45
Sh3rf1Q69ZI1 Zfp931-202ENSMUST00000108924 962 ntAPPRIS P1 TSL 3 BASIC6.02□□□□□ -1.45
Sh3rf1Q69ZI1 Gm3033-201ENSMUST00000112792 438 ntAPPRIS P1 TSL 5 BASIC6.02□□□□□ -1.45
Sh3rf1Q69ZI1 Gm13379-201ENSMUST00000118053 621 ntBASIC6.02□□□□□ -1.45
Sh3rf1Q69ZI1 Gm13603-201ENSMUST00000119404 83 ntBASIC6.02□□□□□ -1.45
Sh3rf1Q69ZI1 Xlr3e-ps-201ENSMUST00000119644 682 ntBASIC6.02□□□□□ -1.45
Sh3rf1Q69ZI1 Gm14159-201ENSMUST00000119832 451 ntBASIC6.02□□□□□ -1.45
Sh3rf1Q69ZI1 Gm6587-201ENSMUST00000120219 613 ntBASIC6.02□□□□□ -1.45
Sh3rf1Q69ZI1 Gm12399-201ENSMUST00000121475 446 ntBASIC6.02□□□□□ -1.45
Sh3rf1Q69ZI1 Vmn1r-ps116-201ENSMUST00000121544 292 ntBASIC6.02□□□□□ -1.45
Sh3rf1Q69ZI1 Rhox11-ps1-201ENSMUST00000121945 387 ntBASIC6.02□□□□□ -1.45
Sh3rf1Q69ZI1 Gm12066-201ENSMUST00000123592 443 ntTSL 3 BASIC6.02□□□□□ -1.45
Sh3rf1Q69ZI1 Grip1os2-201ENSMUST00000153898 722 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
Sh3rf1Q69ZI1 Mir1945-201ENSMUST00000157919 78 ntBASIC6.02□□□□□ -1.45
Sh3rf1Q69ZI1 Gm16164-201ENSMUST00000160078 468 ntBASIC6.02□□□□□ -1.45
Sh3rf1Q69ZI1 Gm17631-201ENSMUST00000171980 69 ntAPPRIS P1 TSL 5 BASIC6.02□□□□□ -1.45
Sh3rf1Q69ZI1 Olfr758-ps1-201ENSMUST00000173901 841 ntBASIC6.02□□□□□ -1.45
Sh3rf1Q69ZI1 Trav6d-7-201ENSMUST00000178650 358 ntAPPRIS P1 BASIC6.02□□□□□ -1.45
Sh3rf1Q69ZI1 Trav6n-7-201ENSMUST00000179607 358 ntAPPRIS P1 BASIC6.02□□□□□ -1.45
Sh3rf1Q69ZI1 Gm7952-201ENSMUST00000180540 984 ntBASIC6.02□□□□□ -1.45
Sh3rf1Q69ZI1 Mrgprc4-ps-201ENSMUST00000186018 964 ntBASIC6.02□□□□□ -1.45
Sh3rf1Q69ZI1 1700023F02Rik-202ENSMUST00000188279 412 ntTSL 2 BASIC6.02□□□□□ -1.45
Sh3rf1Q69ZI1 6430511E19Rik-201ENSMUST00000192772 3835 ntBASIC6.02□□□□□ -1.45
Sh3rf1Q69ZI1 Gm37501-201ENSMUST00000192830 691 ntBASIC6.02□□□□□ -1.45
Sh3rf1Q69ZI1 Ighv5-3-201ENSMUST00000195336 322 ntBASIC6.02□□□□□ -1.45
Sh3rf1Q69ZI1 Gm42805-201ENSMUST00000196158 276 ntBASIC6.02□□□□□ -1.45
Sh3rf1Q69ZI1 Gm43729-201ENSMUST00000196949 499 ntTSL 3 BASIC6.02□□□□□ -1.45
Sh3rf1Q69ZI1 Trav6d-6-201ENSMUST00000197754 344 ntAPPRIS P1 BASIC6.02□□□□□ -1.45
Sh3rf1Q69ZI1 Gm33178-201ENSMUST00000212090 257 ntBASIC6.02□□□□□ -1.45
Sh3rf1Q69ZI1 Olfr1240-201ENSMUST00000215362 1074 ntAPPRIS P1 BASIC6.02□□□□□ -1.45
Sh3rf1Q69ZI1 AC110381.1-201ENSMUST00000218987 586 ntBASIC6.02□□□□□ -1.45
Sh3rf1Q69ZI1 C230072F16Rik-203ENSMUST00000220322 1136 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
Sh3rf1Q69ZI1 Gm7753-201ENSMUST00000221007 867 ntBASIC6.02□□□□□ -1.45
Sh3rf1Q69ZI1 Gm11360-201ENSMUST00000221898 262 ntBASIC6.02□□□□□ -1.45
Sh3rf1Q69ZI1 AC164618.1-201ENSMUST00000225769 592 ntBASIC6.02□□□□□ -1.45
Sh3rf1Q69ZI1 AC138718.1-201ENSMUST00000225947 1009 ntBASIC6.02□□□□□ -1.45
Sh3rf1Q69ZI1 CT030238.4-203ENSMUST00000227343 836 ntBASIC6.02□□□□□ -1.45
Retrieved 100 of 76,532 protein–RNA pairs in 78.6 ms