Protein–RNA interactions for Protein: P55066

Ncan, Neurocan core protein, mousemouse

Predictions only

Length 1,268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NcanP55066 Gm15675-201ENSMUST00000130486 3681 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
NcanP55066 Gm37767-201ENSMUST00000193239 1834 ntBASIC5.09□□□□□ -1.59
NcanP55066 Mrc1-201ENSMUST00000028045 5374 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
NcanP55066 Gm15624-203ENSMUST00000204811 3402 ntBASIC5.09□□□□□ -1.59
NcanP55066 Olfr1330-202ENSMUST00000105035 1027 ntAPPRIS P1 TSL 3 BASIC5.09□□□□□ -1.59
NcanP55066 Sva-202ENSMUST00000117406 645 ntAPPRIS ALT2 TSL 1 (best) BASIC5.09□□□□□ -1.59
NcanP55066 Vmn1r-ps102-201ENSMUST00000120663 886 ntBASIC5.09□□□□□ -1.59
NcanP55066 Gm14732-201ENSMUST00000121372 545 ntBASIC5.09□□□□□ -1.59
NcanP55066 Gm16259-201ENSMUST00000145241 553 ntBASIC5.09□□□□□ -1.59
NcanP55066 Cldn34-ps-201ENSMUST00000145498 600 ntBASIC5.09□□□□□ -1.59
NcanP55066 A930041C12Rik-201ENSMUST00000149156 537 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
NcanP55066 Obox4-ps29-201ENSMUST00000175956 1134 ntBASIC5.09□□□□□ -1.59
NcanP55066 Scgb2a2-201ENSMUST00000179814 1107 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.59
NcanP55066 Gm37243-201ENSMUST00000193407 595 ntBASIC5.09□□□□□ -1.59
NcanP55066 Gm34732-201ENSMUST00000195441 445 ntTSL 3 BASIC5.09□□□□□ -1.59
NcanP55066 Gm37614-201ENSMUST00000195645 210 ntBASIC5.09□□□□□ -1.59
NcanP55066 4930401A07Rik-202ENSMUST00000216155 360 ntTSL 2 BASIC5.09□□□□□ -1.59
NcanP55066 Gm35371-201ENSMUST00000216204 579 ntTSL 5 BASIC5.09□□□□□ -1.59
NcanP55066 Gm40477-202ENSMUST00000221505 881 ntTSL 3 BASIC5.09□□□□□ -1.59
NcanP55066 CT485612.3-201ENSMUST00000222179 408 ntBASIC5.09□□□□□ -1.59
NcanP55066 AC122448.1-201ENSMUST00000226317 772 ntBASIC5.09□□□□□ -1.59
NcanP55066 Sprr2e-201ENSMUST00000068399 647 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
NcanP55066 Gm22868-201ENSMUST00000083955 164 ntBASIC5.09□□□□□ -1.59
NcanP55066 Rsph4a-201ENSMUST00000169670 3650 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
NcanP55066 Pls3-203ENSMUST00000114058 3032 ntTSL 5 BASIC5.09□□□□□ -1.6
NcanP55066 Olfr1279-203ENSMUST00000216697 3385 ntAPPRIS ALT1 TSL 5 BASIC5.08□□□□□ -1.6
NcanP55066 Zfp955b-201ENSMUST00000099414 1638 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
NcanP55066 Neb-201ENSMUST00000028320 10298 ntTSL 5 BASIC5.08□□□□□ -1.6
NcanP55066 Map3k19-201ENSMUST00000061512 3936 ntAPPRIS P2 TSL 5 BASIC5.08□□□□□ -1.6
NcanP55066 Olfr459-203ENSMUST00000214976 3770 ntAPPRIS P1 TSL 2 BASIC5.08□□□□□ -1.6
NcanP55066 Olfr390-202ENSMUST00000120081 3604 ntAPPRIS P1 TSL 2 BASIC5.08□□□□□ -1.6
NcanP55066 Plcb4-201ENSMUST00000035646 3635 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
NcanP55066 Gm44175-201ENSMUST00000204863 4256 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
NcanP55066 Zfp280c-201ENSMUST00000072292 4045 ntAPPRIS ALT2 TSL 1 (best) BASIC5.08□□□□□ -1.6
NcanP55066 Vmn2r79-201ENSMUST00000164462 2556 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
NcanP55066 Gm25833-201ENSMUST00000104137 133 ntBASIC5.08□□□□□ -1.6
NcanP55066 Gm12149-201ENSMUST00000117511 654 ntBASIC5.08□□□□□ -1.6
NcanP55066 Gm12105-201ENSMUST00000120846 779 ntBASIC5.08□□□□□ -1.6
NcanP55066 Gm13132-201ENSMUST00000121194 472 ntBASIC5.08□□□□□ -1.6
NcanP55066 Gm22718-201ENSMUST00000122701 315 ntBASIC5.08□□□□□ -1.6
NcanP55066 Spin2-ps4-201ENSMUST00000126395 762 ntBASIC5.08□□□□□ -1.6
NcanP55066 Spin2-ps3-201ENSMUST00000148147 762 ntBASIC5.08□□□□□ -1.6
NcanP55066 Gm23168-201ENSMUST00000157156 143 ntBASIC5.08□□□□□ -1.6
NcanP55066 Gm22361-201ENSMUST00000158435 176 ntBASIC5.08□□□□□ -1.6
NcanP55066 Gm17152-201ENSMUST00000172430 535 ntBASIC5.08□□□□□ -1.6
NcanP55066 Vmn1r-ps71-201ENSMUST00000172648 924 ntBASIC5.08□□□□□ -1.6
NcanP55066 Gm13249-201ENSMUST00000177803 345 ntBASIC5.08□□□□□ -1.6
NcanP55066 Gm13144-201ENSMUST00000179385 345 ntBASIC5.08□□□□□ -1.6
NcanP55066 1700025F22Rik-203ENSMUST00000181284 562 ntTSL 3 BASIC5.08□□□□□ -1.6
NcanP55066 Stk-ps2-204ENSMUST00000187808 616 ntBASIC5.08□□□□□ -1.6
NcanP55066 Olfr258-ps1-201ENSMUST00000192471 891 ntBASIC5.08□□□□□ -1.6
NcanP55066 Gm37005-201ENSMUST00000193281 1164 ntBASIC5.08□□□□□ -1.6
NcanP55066 Ube2l3-ps1-201ENSMUST00000199777 436 ntBASIC5.08□□□□□ -1.6
NcanP55066 Gm44232-201ENSMUST00000204537 225 ntBASIC5.08□□□□□ -1.6
NcanP55066 Gm45507-201ENSMUST00000210611 519 ntTSL 5 BASIC5.08□□□□□ -1.6
NcanP55066 Gm45499-201ENSMUST00000211656 280 ntBASIC5.08□□□□□ -1.6
NcanP55066 Gm6980-201ENSMUST00000214327 1003 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
NcanP55066 AC131720.3-201ENSMUST00000219113 275 ntBASIC5.08□□□□□ -1.6
NcanP55066 Gm18510-201ENSMUST00000219335 1096 ntBASIC5.08□□□□□ -1.6
NcanP55066 Fam228b-208ENSMUST00000219898 288 ntAPPRIS ALT2 TSL 3 BASIC5.08□□□□□ -1.6
NcanP55066 Gm3338-201ENSMUST00000220982 269 ntBASIC5.08□□□□□ -1.6
NcanP55066 Vmn1r89-206ENSMUST00000227319 985 ntBASIC5.08□□□□□ -1.6
NcanP55066 Olfr135-201ENSMUST00000076245 1079 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
NcanP55066 Olfr492-201ENSMUST00000079865 945 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
NcanP55066 C87977-203ENSMUST00000105755 1802 ntAPPRIS ALT2 TSL 5 BASIC5.08□□□□□ -1.6
NcanP55066 Btbd35f13-201ENSMUST00000177912 1701 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
NcanP55066 Bche-201ENSMUST00000029367 6210 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
NcanP55066 Olfr198-202ENSMUST00000208244 2200 ntAPPRIS P1 TSL 2 BASIC5.08□□□□□ -1.6
NcanP55066 Gm37137-201ENSMUST00000195138 2684 ntBASIC5.08□□□□□ -1.6
NcanP55066 Vmn1r218-203ENSMUST00000227050 10364 ntAPPRIS P2 BASIC5.08□□□□□ -1.6
NcanP55066 Gm37890-201ENSMUST00000195610 3992 ntBASIC5.07□□□□□ -1.6
NcanP55066 Olfr1231-202ENSMUST00000216144 3961 ntAPPRIS P1 TSL 3 BASIC5.07□□□□□ -1.6
NcanP55066 Slc22a29-205ENSMUST00000222533 1473 ntTSL 5 BASIC5.07□□□□□ -1.6
NcanP55066 Xkrx-201ENSMUST00000033611 2876 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
NcanP55066 Gm43466-201ENSMUST00000197836 5214 ntBASIC5.07□□□□□ -1.6
NcanP55066 Cd226-201ENSMUST00000037142 2357 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
NcanP55066 Gm11782-201ENSMUST00000131675 2804 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
NcanP55066 Gm45304-201ENSMUST00000210303 2828 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
NcanP55066 Olfr446-203ENSMUST00000215686 4210 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
NcanP55066 Olfr446-204ENSMUST00000216199 4218 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
NcanP55066 Vmn1r203-202ENSMUST00000227520 8227 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
NcanP55066 Clk1-201ENSMUST00000034868 1796 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
NcanP55066 Olfr1443-203ENSMUST00000215134 3995 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
NcanP55066 Vcam1-201ENSMUST00000029574 3469 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
NcanP55066 Gm17275-201ENSMUST00000181811 2550 ntTSL 5 BASIC5.07□□□□□ -1.6
NcanP55066 Igkv8-19-201ENSMUST00000103389 305 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
NcanP55066 Gm12649-201ENSMUST00000137509 581 ntTSL 3 BASIC5.07□□□□□ -1.6
NcanP55066 Gm13985-201ENSMUST00000154409 621 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
NcanP55066 Gm23755-201ENSMUST00000157578 343 ntBASIC5.07□□□□□ -1.6
NcanP55066 Gm24689-201ENSMUST00000157760 104 ntBASIC5.07□□□□□ -1.6
NcanP55066 Gm25907-201ENSMUST00000158486 125 ntBASIC5.07□□□□□ -1.6
NcanP55066 Gm25535-201ENSMUST00000175364 125 ntBASIC5.07□□□□□ -1.6
NcanP55066 G530012D18Rik-201ENSMUST00000178024 420 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
NcanP55066 Gm27249-201ENSMUST00000185049 328 ntBASIC5.07□□□□□ -1.6
NcanP55066 Gm28471-201ENSMUST00000185994 615 ntBASIC5.07□□□□□ -1.6
NcanP55066 Gm37073-201ENSMUST00000192469 1222 ntBASIC5.07□□□□□ -1.6
NcanP55066 Gm7142-201ENSMUST00000194232 586 ntBASIC5.07□□□□□ -1.6
NcanP55066 Gm17781-201ENSMUST00000195232 649 ntBASIC5.07□□□□□ -1.6
NcanP55066 1700012D16Rik-201ENSMUST00000197231 577 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
NcanP55066 Gm38413-201ENSMUST00000197852 348 ntTSL 2 BASIC5.07□□□□□ -1.6
Retrieved 100 of 76,532 protein–RNA pairs in 99.2 ms