Protein–RNA interactions for Protein: G3UXB3

Nkx1-1, NK1 homeobox 1, mousemouse

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx1-1G3UXB3 Mctp2-201ENSMUST00000079323 5802 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Nkx1-1G3UXB3 Zfp677-202ENSMUST00000162659 2917 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Nkx1-1G3UXB3 Robo4-202ENSMUST00000115046 3878 ntAPPRIS ALT2 TSL 2 BASIC8.34□□□□□ -1.07
Nkx1-1G3UXB3 Cops2-203ENSMUST00000110463 3392 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
Nkx1-1G3UXB3 Gm26720-201ENSMUST00000181260 3538 ntTSL 5 BASIC8.34□□□□□ -1.07
Nkx1-1G3UXB3 Vwde-202ENSMUST00000203074 5626 ntAPPRIS P1 TSL 5 BASIC8.34□□□□□ -1.07
Nkx1-1G3UXB3 Oog3-201ENSMUST00000050933 1865 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Nkx1-1G3UXB3 CT009536.1-201ENSMUST00000223774 2151 ntBASIC8.34□□□□□ -1.08
Nkx1-1G3UXB3 Ednra-201ENSMUST00000034029 3625 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.08
Nkx1-1G3UXB3 Gm45534-201ENSMUST00000211449 2339 ntBASIC8.34□□□□□ -1.08
Nkx1-1G3UXB3 Sec16b-203ENSMUST00000111700 4369 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Nkx1-1G3UXB3 Ano9-201ENSMUST00000067836 3019 ntAPPRIS P1 TSL 5 BASIC8.33□□□□□ -1.08
Nkx1-1G3UXB3 Nup98-203ENSMUST00000210682 6694 ntAPPRIS P1 TSL 5 BASIC8.33□□□□□ -1.08
Nkx1-1G3UXB3 Gm17130-201ENSMUST00000201542 2683 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
Nkx1-1G3UXB3 Gm12834-201ENSMUST00000121855 2829 ntBASIC8.33□□□□□ -1.08
Nkx1-1G3UXB3 Plec-202ENSMUST00000054449 15018 ntAPPRIS ALT2 TSL 5 BASIC8.33□□□□□ -1.08
Nkx1-1G3UXB3 Grip1-210ENSMUST00000144825 3250 ntAPPRIS ALT2 TSL 1 (best) BASIC8.33□□□□□ -1.08
Nkx1-1G3UXB3 Ctnnd1-203ENSMUST00000067232 6119 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
Nkx1-1G3UXB3 Gm22774-201ENSMUST00000102084 109 ntBASIC8.33□□□□□ -1.08
Nkx1-1G3UXB3 Trav6-1-201ENSMUST00000103571 338 ntAPPRIS P1 BASIC8.33□□□□□ -1.08
Nkx1-1G3UXB3 Gm15206-201ENSMUST00000119143 454 ntBASIC8.33□□□□□ -1.08
Nkx1-1G3UXB3 Il1rap-203ENSMUST00000166294 3200 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
Nkx1-1G3UXB3 Cd101-202ENSMUST00000167086 3223 ntAPPRIS ALT2 TSL 5 BASIC8.33□□□□□ -1.08
Nkx1-1G3UXB3 Gm28801-201ENSMUST00000188761 449 ntBASIC8.33□□□□□ -1.08
Nkx1-1G3UXB3 Gm29065-201ENSMUST00000188786 487 ntTSL 3 BASIC8.33□□□□□ -1.08
Nkx1-1G3UXB3 Gm29330-201ENSMUST00000190032 699 ntBASIC8.33□□□□□ -1.08
Nkx1-1G3UXB3 Gm28538-201ENSMUST00000190919 2166 ntTSL 5 BASIC8.33□□□□□ -1.08
Nkx1-1G3UXB3 Gm43193-201ENSMUST00000197732 441 ntBASIC8.33□□□□□ -1.08
Nkx1-1G3UXB3 n-TStga1-201ENSMUST00000199903 109 ntBASIC8.33□□□□□ -1.08
Nkx1-1G3UXB3 Speer9-ps1-201ENSMUST00000203447 775 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
Nkx1-1G3UXB3 Gm18405-201ENSMUST00000220743 511 ntBASIC8.33□□□□□ -1.08
Nkx1-1G3UXB3 AC124426.2-201ENSMUST00000220886 404 ntTSL 5 BASIC8.33□□□□□ -1.08
Nkx1-1G3UXB3 AC156790.1-201ENSMUST00000226572 559 ntBASIC8.33□□□□□ -1.08
Nkx1-1G3UXB3 AC154718.1-201ENSMUST00000226676 250 ntBASIC8.33□□□□□ -1.08
Nkx1-1G3UXB3 AC122320.1-201ENSMUST00000227233 105 ntBASIC8.33□□□□□ -1.08
Nkx1-1G3UXB3 Zfp938-201ENSMUST00000041264 2035 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Nkx1-1G3UXB3 Gm14851-201ENSMUST00000077452 351 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Nkx1-1G3UXB3 Gm23460-201ENSMUST00000083258 109 ntBASIC8.33□□□□□ -1.08
Nkx1-1G3UXB3 Sox6-205ENSMUST00000169129 5122 ntAPPRIS ALT2 TSL 1 (best) BASIC8.33□□□□□ -1.08
Nkx1-1G3UXB3 Smpd4-209ENSMUST00000165363 3046 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
Nkx1-1G3UXB3 Gm2136-201ENSMUST00000193945 2577 ntBASIC8.33□□□□□ -1.08
Nkx1-1G3UXB3 Gm3147-202ENSMUST00000201071 1848 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Nkx1-1G3UXB3 Kcnrg-202ENSMUST00000225582 1821 ntAPPRIS ALT2 BASIC8.33□□□□□ -1.08
Nkx1-1G3UXB3 A430089I19Rik-201ENSMUST00000097479 1848 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Nkx1-1G3UXB3 Oprl1-201ENSMUST00000071585 2999 ntAPPRIS P3 TSL 1 (best) BASIC8.33□□□□□ -1.08
Nkx1-1G3UXB3 Gm13477-201ENSMUST00000121620 2687 ntBASIC8.33□□□□□ -1.08
Nkx1-1G3UXB3 3000002C10Rik-203ENSMUST00000144161 3977 ntTSL 2 BASIC8.33□□□□□ -1.08
Nkx1-1G3UXB3 4930467D21Rik-201ENSMUST00000180634 2530 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
Nkx1-1G3UXB3 Luzp1-203ENSMUST00000105849 7438 ntAPPRIS P1 TSL 5 BASIC8.33□□□□□ -1.08
Nkx1-1G3UXB3 Stat1-206ENSMUST00000186857 4241 ntAPPRIS P2 TSL 1 (best) BASIC8.33□□□□□ -1.08
Nkx1-1G3UXB3 Rnf24-202ENSMUST00000110194 5944 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Nkx1-1G3UXB3 Prpf40a-208ENSMUST00000210789 3773 ntAPPRIS ALT2 TSL 5 BASIC8.33□□□□□ -1.08
Nkx1-1G3UXB3 Usp54-202ENSMUST00000035340 6495 ntAPPRIS P1 TSL 5 BASIC8.33□□□□□ -1.08
Nkx1-1G3UXB3 Ccr6-201ENSMUST00000097418 1755 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Nkx1-1G3UXB3 Cfap44-202ENSMUST00000120049 6199 ntAPPRIS P1 TSL 5 BASIC8.33□□□□□ -1.08
Nkx1-1G3UXB3 Olfr1378-202ENSMUST00000213259 4324 ntAPPRIS P1 TSL 5 BASIC8.33□□□□□ -1.08
Nkx1-1G3UXB3 Bbs9-211ENSMUST00000150395 3425 ntAPPRIS P2 TSL 1 (best) BASIC8.32□□□□□ -1.08
Nkx1-1G3UXB3 AC131586.2-202ENSMUST00000227016 2705 ntBASIC8.32□□□□□ -1.08
Nkx1-1G3UXB3 Zscan26-202ENSMUST00000110485 4366 ntAPPRIS P1 TSL 5 BASIC8.32□□□□□ -1.08
Nkx1-1G3UXB3 Bmx-201ENSMUST00000112263 2433 ntAPPRIS ALT2 TSL 5 BASIC8.32□□□□□ -1.08
Nkx1-1G3UXB3 Mbnl3-202ENSMUST00000114875 4649 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
Nkx1-1G3UXB3 Trub1-201ENSMUST00000026072 4300 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
Nkx1-1G3UXB3 Gm14325-201ENSMUST00000108939 1576 ntAPPRIS P1 TSL 2 BASIC8.32□□□□□ -1.08
Nkx1-1G3UXB3 Foxn3-201ENSMUST00000046859 7705 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Nkx1-1G3UXB3 Mttp-202ENSMUST00000098580 3072 ntTSL 5 BASIC8.32□□□□□ -1.08
Nkx1-1G3UXB3 4930432O09Rik-201ENSMUST00000219710 1986 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
Nkx1-1G3UXB3 A330049N07Rik-203ENSMUST00000220010 1989 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
Nkx1-1G3UXB3 4930431P03Rik-204ENSMUST00000228169 1967 ntBASIC8.32□□□□□ -1.08
Nkx1-1G3UXB3 Gm4922-201ENSMUST00000055107 1950 ntAPPRIS P1 TSL 3 BASIC8.32□□□□□ -1.08
Nkx1-1G3UXB3 Nwd1-204ENSMUST00000161254 10792 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
Nkx1-1G3UXB3 Nwd1-209ENSMUST00000228312 10789 ntAPPRIS P1 BASIC8.32□□□□□ -1.08
Nkx1-1G3UXB3 4932413F04Rik-201ENSMUST00000190332 2765 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
Nkx1-1G3UXB3 Gm13103-201ENSMUST00000094522 1833 ntAPPRIS P2 TSL 1 (best) BASIC8.32□□□□□ -1.08
Nkx1-1G3UXB3 Serpina3f-201ENSMUST00000101080 2207 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Nkx1-1G3UXB3 Gm4951-201ENSMUST00000031549 2645 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Nkx1-1G3UXB3 Hist2h2be-201ENSMUST00000090781 2620 ntAPPRIS P1 BASIC8.32□□□□□ -1.08
Nkx1-1G3UXB3 Gm20730-201ENSMUST00000103301 359 ntAPPRIS P1 TSL 5 BASIC8.32□□□□□ -1.08
Nkx1-1G3UXB3 Gm15183-201ENSMUST00000118933 348 ntBASIC8.32□□□□□ -1.08
Nkx1-1G3UXB3 Gm11369-201ENSMUST00000120812 318 ntBASIC8.32□□□□□ -1.08
Nkx1-1G3UXB3 Gm12618-201ENSMUST00000121754 483 ntBASIC8.32□□□□□ -1.08
Nkx1-1G3UXB3 Tmem216-203ENSMUST00000123788 935 ntAPPRIS P1 TSL 3 BASIC8.32□□□□□ -1.08
Nkx1-1G3UXB3 Gm13715-201ENSMUST00000136578 411 ntTSL 3 BASIC8.32□□□□□ -1.08
Nkx1-1G3UXB3 1700047F07Rik-202ENSMUST00000143064 463 ntTSL 5 BASIC8.32□□□□□ -1.08
Nkx1-1G3UXB3 Gm13291-201ENSMUST00000143527 655 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
Nkx1-1G3UXB3 4933406D12Rik-201ENSMUST00000147212 737 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
Nkx1-1G3UXB3 Gm11846-201ENSMUST00000155156 515 ntTSL 2 BASIC8.32□□□□□ -1.08
Nkx1-1G3UXB3 Gm23474-201ENSMUST00000158884 75 ntBASIC8.32□□□□□ -1.08
Nkx1-1G3UXB3 Mir3112-201ENSMUST00000175431 82 ntBASIC8.32□□□□□ -1.08
Nkx1-1G3UXB3 Gm23002-201ENSMUST00000179221 107 ntBASIC8.32□□□□□ -1.08
Nkx1-1G3UXB3 1810053B23Rik-202ENSMUST00000185364 590 ntTSL 3 BASIC8.32□□□□□ -1.08
Nkx1-1G3UXB3 Gm28163-201ENSMUST00000187099 325 ntBASIC8.32□□□□□ -1.08
Nkx1-1G3UXB3 Gm20257-202ENSMUST00000188643 130 ntBASIC8.32□□□□□ -1.08
Nkx1-1G3UXB3 Gm6260-202ENSMUST00000197170 921 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
Nkx1-1G3UXB3 4930500F04Rik-202ENSMUST00000202156 251 ntTSL 3 BASIC8.32□□□□□ -1.08
Nkx1-1G3UXB3 Gm5-202ENSMUST00000202386 420 ntTSL 3 BASIC8.32□□□□□ -1.08
Nkx1-1G3UXB3 Gm44768-201ENSMUST00000205719 393 ntBASIC8.32□□□□□ -1.08
Nkx1-1G3UXB3 Fxyd1-207ENSMUST00000205778 438 ntAPPRIS P1 TSL 3 BASIC8.32□□□□□ -1.08
Nkx1-1G3UXB3 AC154834.1-201ENSMUST00000224697 358 ntBASIC8.32□□□□□ -1.08
Nkx1-1G3UXB3 Gm26128-201ENSMUST00000083170 110 ntBASIC8.32□□□□□ -1.08
Nkx1-1G3UXB3 Mir298-201ENSMUST00000083476 82 ntBASIC8.32□□□□□ -1.08
Retrieved 100 of 76,532 protein–RNA pairs in 122.7 ms