Protein–RNA interactions for Protein: S4R1M3

H2afb2, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb2S4R1M3 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
H2afb2S4R1M3 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
H2afb2S4R1M3 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC17.6■□□□□ 0.41
H2afb2S4R1M3 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
H2afb2S4R1M3 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
H2afb2S4R1M3 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
H2afb2S4R1M3 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC17.6■□□□□ 0.41
H2afb2S4R1M3 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
H2afb2S4R1M3 Gm27275-201ENSMUST00000184318 272 ntBASIC17.6■□□□□ 0.41
H2afb2S4R1M3 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
H2afb2S4R1M3 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC17.6■□□□□ 0.41
H2afb2S4R1M3 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
H2afb2S4R1M3 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
H2afb2S4R1M3 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
H2afb2S4R1M3 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
H2afb2S4R1M3 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
H2afb2S4R1M3 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
H2afb2S4R1M3 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
H2afb2S4R1M3 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
H2afb2S4R1M3 Shroom3-211ENSMUST00000225438 5742 ntBASIC17.6■□□□□ 0.41
H2afb2S4R1M3 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
H2afb2S4R1M3 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
H2afb2S4R1M3 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
H2afb2S4R1M3 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
H2afb2S4R1M3 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC17.59■□□□□ 0.41
H2afb2S4R1M3 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
H2afb2S4R1M3 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
H2afb2S4R1M3 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
H2afb2S4R1M3 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC17.59■□□□□ 0.41
H2afb2S4R1M3 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
H2afb2S4R1M3 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
H2afb2S4R1M3 Gm10654-201ENSMUST00000098653 1633 ntBASIC17.59■□□□□ 0.41
H2afb2S4R1M3 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
H2afb2S4R1M3 Gm13158-201ENSMUST00000122007 736 ntBASIC17.59■□□□□ 0.41
H2afb2S4R1M3 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
H2afb2S4R1M3 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
H2afb2S4R1M3 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
H2afb2S4R1M3 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
H2afb2S4R1M3 Gm9954-202ENSMUST00000198686 4725 ntBASIC17.58■□□□□ 0.41
H2afb2S4R1M3 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
H2afb2S4R1M3 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.41
H2afb2S4R1M3 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.41
H2afb2S4R1M3 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC17.58■□□□□ 0.41
H2afb2S4R1M3 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
H2afb2S4R1M3 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
H2afb2S4R1M3 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC17.58■□□□□ 0.4
H2afb2S4R1M3 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
H2afb2S4R1M3 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC17.58■□□□□ 0.4
H2afb2S4R1M3 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
H2afb2S4R1M3 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
H2afb2S4R1M3 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
H2afb2S4R1M3 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
H2afb2S4R1M3 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
H2afb2S4R1M3 Gm42900-201ENSMUST00000197184 2167 ntBASIC17.57■□□□□ 0.4
H2afb2S4R1M3 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
H2afb2S4R1M3 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
H2afb2S4R1M3 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
H2afb2S4R1M3 Gm45560-201ENSMUST00000211492 1472 ntBASIC17.57■□□□□ 0.4
H2afb2S4R1M3 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
H2afb2S4R1M3 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
H2afb2S4R1M3 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC17.57■□□□□ 0.4
H2afb2S4R1M3 Gm11643-201ENSMUST00000119578 864 ntBASIC17.57■□□□□ 0.4
H2afb2S4R1M3 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
H2afb2S4R1M3 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
H2afb2S4R1M3 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
H2afb2S4R1M3 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
H2afb2S4R1M3 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
H2afb2S4R1M3 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
H2afb2S4R1M3 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
H2afb2S4R1M3 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
H2afb2S4R1M3 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
H2afb2S4R1M3 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC17.56■□□□□ 0.4
H2afb2S4R1M3 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC17.56■□□□□ 0.4
H2afb2S4R1M3 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
H2afb2S4R1M3 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC17.56■□□□□ 0.4
H2afb2S4R1M3 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
H2afb2S4R1M3 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
H2afb2S4R1M3 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
H2afb2S4R1M3 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
H2afb2S4R1M3 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
H2afb2S4R1M3 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
H2afb2S4R1M3 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
H2afb2S4R1M3 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
H2afb2S4R1M3 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
H2afb2S4R1M3 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
H2afb2S4R1M3 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
H2afb2S4R1M3 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
H2afb2S4R1M3 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
H2afb2S4R1M3 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
H2afb2S4R1M3 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC17.56■□□□□ 0.4
H2afb2S4R1M3 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
H2afb2S4R1M3 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
H2afb2S4R1M3 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
H2afb2S4R1M3 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
H2afb2S4R1M3 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC17.55■□□□□ 0.4
H2afb2S4R1M3 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
H2afb2S4R1M3 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
H2afb2S4R1M3 Mir8112-201ENSMUST00000184382 131 ntBASIC17.55■□□□□ 0.4
H2afb2S4R1M3 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC17.55■□□□□ 0.4
H2afb2S4R1M3 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC17.55■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 20.6 ms