Protein–RNA interactions for Protein: Q9Z2L7

Crlf3, Cytokine receptor-like factor 3, mousemouse

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Crlf3Q9Z2L7 Gm5297-201ENSMUST00000198555 1171 ntBASIC17.79■□□□□ 0.44
Crlf3Q9Z2L7 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Crlf3Q9Z2L7 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC17.79■□□□□ 0.44
Crlf3Q9Z2L7 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
Crlf3Q9Z2L7 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Crlf3Q9Z2L7 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Crlf3Q9Z2L7 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Crlf3Q9Z2L7 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Crlf3Q9Z2L7 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
Crlf3Q9Z2L7 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Crlf3Q9Z2L7 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC17.78■□□□□ 0.44
Crlf3Q9Z2L7 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Crlf3Q9Z2L7 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Crlf3Q9Z2L7 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Crlf3Q9Z2L7 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Crlf3Q9Z2L7 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Crlf3Q9Z2L7 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
Crlf3Q9Z2L7 AV356131-201ENSMUST00000206201 750 ntBASIC17.78■□□□□ 0.44
Crlf3Q9Z2L7 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
Crlf3Q9Z2L7 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC17.78■□□□□ 0.44
Crlf3Q9Z2L7 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
Crlf3Q9Z2L7 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
Crlf3Q9Z2L7 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
Crlf3Q9Z2L7 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
Crlf3Q9Z2L7 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
Crlf3Q9Z2L7 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Crlf3Q9Z2L7 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Crlf3Q9Z2L7 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC17.77■□□□□ 0.44
Crlf3Q9Z2L7 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Crlf3Q9Z2L7 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC17.77■□□□□ 0.44
Crlf3Q9Z2L7 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC17.77■□□□□ 0.44
Crlf3Q9Z2L7 Gm13146-201ENSMUST00000118508 780 ntBASIC17.77■□□□□ 0.44
Crlf3Q9Z2L7 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
Crlf3Q9Z2L7 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC17.77■□□□□ 0.44
Crlf3Q9Z2L7 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.44
Crlf3Q9Z2L7 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Crlf3Q9Z2L7 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Crlf3Q9Z2L7 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC17.77■□□□□ 0.44
Crlf3Q9Z2L7 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Crlf3Q9Z2L7 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.43
Crlf3Q9Z2L7 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC17.77■□□□□ 0.43
Crlf3Q9Z2L7 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC17.77■□□□□ 0.43
Crlf3Q9Z2L7 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Crlf3Q9Z2L7 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.43
Crlf3Q9Z2L7 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Crlf3Q9Z2L7 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC17.76■□□□□ 0.43
Crlf3Q9Z2L7 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Crlf3Q9Z2L7 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Crlf3Q9Z2L7 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Crlf3Q9Z2L7 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Crlf3Q9Z2L7 Gm22325-201ENSMUST00000158904 308 ntBASIC17.76■□□□□ 0.43
Crlf3Q9Z2L7 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC17.76■□□□□ 0.43
Crlf3Q9Z2L7 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Crlf3Q9Z2L7 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Crlf3Q9Z2L7 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Crlf3Q9Z2L7 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Crlf3Q9Z2L7 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Crlf3Q9Z2L7 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC17.76■□□□□ 0.43
Crlf3Q9Z2L7 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
Crlf3Q9Z2L7 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
Crlf3Q9Z2L7 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
Crlf3Q9Z2L7 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Crlf3Q9Z2L7 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Crlf3Q9Z2L7 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Crlf3Q9Z2L7 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Crlf3Q9Z2L7 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Crlf3Q9Z2L7 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Crlf3Q9Z2L7 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Crlf3Q9Z2L7 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Crlf3Q9Z2L7 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC17.75■□□□□ 0.43
Crlf3Q9Z2L7 Gm13534-201ENSMUST00000121169 513 ntBASIC17.75■□□□□ 0.43
Crlf3Q9Z2L7 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Crlf3Q9Z2L7 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC17.75■□□□□ 0.43
Crlf3Q9Z2L7 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Crlf3Q9Z2L7 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC17.75■□□□□ 0.43
Crlf3Q9Z2L7 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Crlf3Q9Z2L7 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Crlf3Q9Z2L7 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC17.75■□□□□ 0.43
Crlf3Q9Z2L7 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC17.75■□□□□ 0.43
Crlf3Q9Z2L7 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC17.74■□□□□ 0.43
Crlf3Q9Z2L7 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC17.74■□□□□ 0.43
Crlf3Q9Z2L7 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Crlf3Q9Z2L7 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Crlf3Q9Z2L7 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Crlf3Q9Z2L7 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Crlf3Q9Z2L7 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
Crlf3Q9Z2L7 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Crlf3Q9Z2L7 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Crlf3Q9Z2L7 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC17.74■□□□□ 0.43
Crlf3Q9Z2L7 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Crlf3Q9Z2L7 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Crlf3Q9Z2L7 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Crlf3Q9Z2L7 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Crlf3Q9Z2L7 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Crlf3Q9Z2L7 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Crlf3Q9Z2L7 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Crlf3Q9Z2L7 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Crlf3Q9Z2L7 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Crlf3Q9Z2L7 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
Crlf3Q9Z2L7 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC17.73■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 43.1 ms