Protein–RNA interactions for Protein: Q9Z0Y9

Nr1h3, Oxysterols receptor LXR-alpha, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr1h3Q9Z0Y9 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.64
Nr1h3Q9Z0Y9 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
Nr1h3Q9Z0Y9 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
Nr1h3Q9Z0Y9 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC19.08■□□□□ 0.64
Nr1h3Q9Z0Y9 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.64
Nr1h3Q9Z0Y9 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Nr1h3Q9Z0Y9 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
Nr1h3Q9Z0Y9 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Nr1h3Q9Z0Y9 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Nr1h3Q9Z0Y9 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
Nr1h3Q9Z0Y9 Gm35558-201ENSMUST00000222675 2219 ntBASIC19.07■□□□□ 0.64
Nr1h3Q9Z0Y9 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC19.07■□□□□ 0.64
Nr1h3Q9Z0Y9 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
Nr1h3Q9Z0Y9 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Nr1h3Q9Z0Y9 Gm21362-201ENSMUST00000194272 928 ntBASIC19.07■□□□□ 0.64
Nr1h3Q9Z0Y9 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC19.07■□□□□ 0.64
Nr1h3Q9Z0Y9 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Nr1h3Q9Z0Y9 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC19.07■□□□□ 0.64
Nr1h3Q9Z0Y9 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Nr1h3Q9Z0Y9 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
Nr1h3Q9Z0Y9 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
Nr1h3Q9Z0Y9 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
Nr1h3Q9Z0Y9 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Nr1h3Q9Z0Y9 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Nr1h3Q9Z0Y9 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC19.06■□□□□ 0.64
Nr1h3Q9Z0Y9 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
Nr1h3Q9Z0Y9 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Nr1h3Q9Z0Y9 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Nr1h3Q9Z0Y9 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Nr1h3Q9Z0Y9 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Nr1h3Q9Z0Y9 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC19.06■□□□□ 0.64
Nr1h3Q9Z0Y9 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Nr1h3Q9Z0Y9 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Nr1h3Q9Z0Y9 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Nr1h3Q9Z0Y9 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Nr1h3Q9Z0Y9 Gm2274-201ENSMUST00000184539 609 ntBASIC19.06■□□□□ 0.64
Nr1h3Q9Z0Y9 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC19.06■□□□□ 0.64
Nr1h3Q9Z0Y9 Gm45058-201ENSMUST00000205810 766 ntBASIC19.06■□□□□ 0.64
Nr1h3Q9Z0Y9 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC19.06■□□□□ 0.64
Nr1h3Q9Z0Y9 Prorsd1-201ENSMUST00000039900 918 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Nr1h3Q9Z0Y9 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Nr1h3Q9Z0Y9 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC19.06■□□□□ 0.64
Nr1h3Q9Z0Y9 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Nr1h3Q9Z0Y9 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Nr1h3Q9Z0Y9 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Nr1h3Q9Z0Y9 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Nr1h3Q9Z0Y9 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Nr1h3Q9Z0Y9 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Nr1h3Q9Z0Y9 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Nr1h3Q9Z0Y9 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Nr1h3Q9Z0Y9 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Nr1h3Q9Z0Y9 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Nr1h3Q9Z0Y9 Gm38308-201ENSMUST00000194934 1809 ntBASIC19.05■□□□□ 0.64
Nr1h3Q9Z0Y9 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
Nr1h3Q9Z0Y9 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC19.05■□□□□ 0.64
Nr1h3Q9Z0Y9 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Nr1h3Q9Z0Y9 Gm4974-201ENSMUST00000209974 875 ntBASIC19.05■□□□□ 0.64
Nr1h3Q9Z0Y9 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC19.05■□□□□ 0.64
Nr1h3Q9Z0Y9 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Nr1h3Q9Z0Y9 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
Nr1h3Q9Z0Y9 AC121961.1-201ENSMUST00000218594 1779 ntBASIC19.05■□□□□ 0.64
Nr1h3Q9Z0Y9 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC19.05■□□□□ 0.64
Nr1h3Q9Z0Y9 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Nr1h3Q9Z0Y9 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Nr1h3Q9Z0Y9 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Nr1h3Q9Z0Y9 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Nr1h3Q9Z0Y9 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Nr1h3Q9Z0Y9 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Nr1h3Q9Z0Y9 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Nr1h3Q9Z0Y9 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC19.04■□□□□ 0.64
Nr1h3Q9Z0Y9 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC19.04■□□□□ 0.64
Nr1h3Q9Z0Y9 Gm10013-201ENSMUST00000106074 672 ntBASIC19.04■□□□□ 0.64
Nr1h3Q9Z0Y9 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
Nr1h3Q9Z0Y9 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Nr1h3Q9Z0Y9 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Nr1h3Q9Z0Y9 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Nr1h3Q9Z0Y9 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC19.04■□□□□ 0.64
Nr1h3Q9Z0Y9 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC19.04■□□□□ 0.64
Nr1h3Q9Z0Y9 Gm43353-201ENSMUST00000199224 1295 ntBASIC19.04■□□□□ 0.64
Nr1h3Q9Z0Y9 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Nr1h3Q9Z0Y9 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC19.04■□□□□ 0.64
Nr1h3Q9Z0Y9 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
Nr1h3Q9Z0Y9 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Nr1h3Q9Z0Y9 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Nr1h3Q9Z0Y9 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Nr1h3Q9Z0Y9 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Nr1h3Q9Z0Y9 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Nr1h3Q9Z0Y9 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Nr1h3Q9Z0Y9 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Nr1h3Q9Z0Y9 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
Nr1h3Q9Z0Y9 Grk6-206ENSMUST00000224995 2971 ntBASIC19.03■□□□□ 0.64
Nr1h3Q9Z0Y9 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Nr1h3Q9Z0Y9 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Nr1h3Q9Z0Y9 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
Nr1h3Q9Z0Y9 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Nr1h3Q9Z0Y9 Mir5130-201ENSMUST00000175160 84 ntBASIC19.03■□□□□ 0.64
Nr1h3Q9Z0Y9 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC19.03■□□□□ 0.64
Nr1h3Q9Z0Y9 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC19.03■□□□□ 0.64
Nr1h3Q9Z0Y9 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC19.03■□□□□ 0.64
Nr1h3Q9Z0Y9 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC19.03■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 20.2 ms