Protein–RNA interactions for Protein: Q9Z0G9

Cldn3, Claudin-3, mousemouse

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn3Q9Z0G9 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cldn3Q9Z0G9 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC17.79■□□□□ 0.44
Cldn3Q9Z0G9 Gm11643-201ENSMUST00000119578 864 ntBASIC17.79■□□□□ 0.44
Cldn3Q9Z0G9 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC17.79■□□□□ 0.44
Cldn3Q9Z0G9 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC17.79■□□□□ 0.44
Cldn3Q9Z0G9 Gm8520-201ENSMUST00000186517 868 ntBASIC17.79■□□□□ 0.44
Cldn3Q9Z0G9 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Cldn3Q9Z0G9 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cldn3Q9Z0G9 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
Cldn3Q9Z0G9 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cldn3Q9Z0G9 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Cldn3Q9Z0G9 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cldn3Q9Z0G9 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC17.79■□□□□ 0.44
Cldn3Q9Z0G9 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cldn3Q9Z0G9 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cldn3Q9Z0G9 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cldn3Q9Z0G9 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cldn3Q9Z0G9 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cldn3Q9Z0G9 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC17.79■□□□□ 0.44
Cldn3Q9Z0G9 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Cldn3Q9Z0G9 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Cldn3Q9Z0G9 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC17.78■□□□□ 0.44
Cldn3Q9Z0G9 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Cldn3Q9Z0G9 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Cldn3Q9Z0G9 Gm13168-201ENSMUST00000121771 632 ntBASIC17.78■□□□□ 0.44
Cldn3Q9Z0G9 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC17.78■□□□□ 0.44
Cldn3Q9Z0G9 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Cldn3Q9Z0G9 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Cldn3Q9Z0G9 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Cldn3Q9Z0G9 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC17.77■□□□□ 0.44
Cldn3Q9Z0G9 Gm9954-202ENSMUST00000198686 4725 ntBASIC17.77■□□□□ 0.44
Cldn3Q9Z0G9 Gm43702-201ENSMUST00000198772 2546 ntBASIC17.77■□□□□ 0.44
Cldn3Q9Z0G9 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Cldn3Q9Z0G9 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Cldn3Q9Z0G9 Gm15378-201ENSMUST00000121894 207 ntBASIC17.77■□□□□ 0.44
Cldn3Q9Z0G9 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Cldn3Q9Z0G9 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC17.77■□□□□ 0.44
Cldn3Q9Z0G9 Gm18025-201ENSMUST00000221733 862 ntBASIC17.77■□□□□ 0.44
Cldn3Q9Z0G9 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Cldn3Q9Z0G9 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
Cldn3Q9Z0G9 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
Cldn3Q9Z0G9 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC17.77■□□□□ 0.43
Cldn3Q9Z0G9 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
Cldn3Q9Z0G9 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC17.77■□□□□ 0.43
Cldn3Q9Z0G9 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
Cldn3Q9Z0G9 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Cldn3Q9Z0G9 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Cldn3Q9Z0G9 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Cldn3Q9Z0G9 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Cldn3Q9Z0G9 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Cldn3Q9Z0G9 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Cldn3Q9Z0G9 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
Cldn3Q9Z0G9 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC17.76■□□□□ 0.43
Cldn3Q9Z0G9 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Cldn3Q9Z0G9 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Cldn3Q9Z0G9 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Cldn3Q9Z0G9 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC17.76■□□□□ 0.43
Cldn3Q9Z0G9 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Cldn3Q9Z0G9 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Cldn3Q9Z0G9 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Cldn3Q9Z0G9 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Cldn3Q9Z0G9 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Cldn3Q9Z0G9 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Cldn3Q9Z0G9 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Cldn3Q9Z0G9 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Cldn3Q9Z0G9 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Cldn3Q9Z0G9 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Cldn3Q9Z0G9 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Cldn3Q9Z0G9 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Cldn3Q9Z0G9 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Cldn3Q9Z0G9 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
Cldn3Q9Z0G9 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC17.75■□□□□ 0.43
Cldn3Q9Z0G9 Gm27011-201ENSMUST00000182352 972 ntBASIC17.75■□□□□ 0.43
Cldn3Q9Z0G9 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Cldn3Q9Z0G9 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Cldn3Q9Z0G9 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Cldn3Q9Z0G9 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Cldn3Q9Z0G9 Gm37820-201ENSMUST00000194021 2147 ntBASIC17.75■□□□□ 0.43
Cldn3Q9Z0G9 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Cldn3Q9Z0G9 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Cldn3Q9Z0G9 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Cldn3Q9Z0G9 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC17.75■□□□□ 0.43
Cldn3Q9Z0G9 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Cldn3Q9Z0G9 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Cldn3Q9Z0G9 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Cldn3Q9Z0G9 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Cldn3Q9Z0G9 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Cldn3Q9Z0G9 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Cldn3Q9Z0G9 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Cldn3Q9Z0G9 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Cldn3Q9Z0G9 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
Cldn3Q9Z0G9 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC17.74■□□□□ 0.43
Cldn3Q9Z0G9 Gm42545-201ENSMUST00000202755 922 ntBASIC17.74■□□□□ 0.43
Cldn3Q9Z0G9 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Cldn3Q9Z0G9 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
Cldn3Q9Z0G9 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Cldn3Q9Z0G9 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Cldn3Q9Z0G9 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Cldn3Q9Z0G9 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC17.74■□□□□ 0.43
Cldn3Q9Z0G9 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 43.2 ms