Protein–RNA interactions for Protein: Q9JLR1

Sec61a2, Protein transport protein Sec61 subunit alpha isoform 2, mousemouse

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a2Q9JLR1 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
Sec61a2Q9JLR1 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Sec61a2Q9JLR1 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Sec61a2Q9JLR1 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Sec61a2Q9JLR1 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC15.85■□□□□ 0.13
Sec61a2Q9JLR1 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Sec61a2Q9JLR1 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Sec61a2Q9JLR1 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Sec61a2Q9JLR1 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Sec61a2Q9JLR1 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Sec61a2Q9JLR1 Gm5828-201ENSMUST00000071842 1860 ntBASIC15.84■□□□□ 0.13
Sec61a2Q9JLR1 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Sec61a2Q9JLR1 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Sec61a2Q9JLR1 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Sec61a2Q9JLR1 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Sec61a2Q9JLR1 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
Sec61a2Q9JLR1 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC15.84■□□□□ 0.13
Sec61a2Q9JLR1 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Sec61a2Q9JLR1 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC15.84■□□□□ 0.13
Sec61a2Q9JLR1 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC15.84■□□□□ 0.13
Sec61a2Q9JLR1 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Sec61a2Q9JLR1 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Sec61a2Q9JLR1 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
Sec61a2Q9JLR1 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Sec61a2Q9JLR1 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Sec61a2Q9JLR1 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Sec61a2Q9JLR1 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Sec61a2Q9JLR1 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Sec61a2Q9JLR1 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Sec61a2Q9JLR1 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Sec61a2Q9JLR1 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC15.84■□□□□ 0.13
Sec61a2Q9JLR1 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Sec61a2Q9JLR1 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Sec61a2Q9JLR1 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Sec61a2Q9JLR1 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC15.83■□□□□ 0.13
Sec61a2Q9JLR1 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
Sec61a2Q9JLR1 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Sec61a2Q9JLR1 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Sec61a2Q9JLR1 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
Sec61a2Q9JLR1 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Sec61a2Q9JLR1 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Sec61a2Q9JLR1 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
Sec61a2Q9JLR1 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Sec61a2Q9JLR1 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Sec61a2Q9JLR1 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
Sec61a2Q9JLR1 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
Sec61a2Q9JLR1 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
Sec61a2Q9JLR1 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Sec61a2Q9JLR1 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
Sec61a2Q9JLR1 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Sec61a2Q9JLR1 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Sec61a2Q9JLR1 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Sec61a2Q9JLR1 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Sec61a2Q9JLR1 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC15.82■□□□□ 0.12
Sec61a2Q9JLR1 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC15.82■□□□□ 0.12
Sec61a2Q9JLR1 Gm2399-201ENSMUST00000104944 225 ntBASIC15.82■□□□□ 0.12
Sec61a2Q9JLR1 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC15.82■□□□□ 0.12
Sec61a2Q9JLR1 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
Sec61a2Q9JLR1 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC15.82■□□□□ 0.12
Sec61a2Q9JLR1 Gm20049-201ENSMUST00000219950 730 ntBASIC15.82■□□□□ 0.12
Sec61a2Q9JLR1 AC112142.1-201ENSMUST00000228796 918 ntBASIC15.82■□□□□ 0.12
Sec61a2Q9JLR1 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
Sec61a2Q9JLR1 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC15.82■□□□□ 0.12
Sec61a2Q9JLR1 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Sec61a2Q9JLR1 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Sec61a2Q9JLR1 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Sec61a2Q9JLR1 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Sec61a2Q9JLR1 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Sec61a2Q9JLR1 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
Sec61a2Q9JLR1 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Sec61a2Q9JLR1 Gm37374-201ENSMUST00000194954 1829 ntBASIC15.82■□□□□ 0.12
Sec61a2Q9JLR1 Gm44544-201ENSMUST00000207052 1844 ntBASIC15.82■□□□□ 0.12
Sec61a2Q9JLR1 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
Sec61a2Q9JLR1 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Sec61a2Q9JLR1 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Sec61a2Q9JLR1 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
Sec61a2Q9JLR1 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC15.81■□□□□ 0.12
Sec61a2Q9JLR1 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Sec61a2Q9JLR1 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC15.81■□□□□ 0.12
Sec61a2Q9JLR1 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Sec61a2Q9JLR1 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC15.81■□□□□ 0.12
Sec61a2Q9JLR1 Gm44549-201ENSMUST00000208351 577 ntBASIC15.81■□□□□ 0.12
Sec61a2Q9JLR1 Spcs1-207ENSMUST00000228767 1008 ntBASIC15.81■□□□□ 0.12
Sec61a2Q9JLR1 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Sec61a2Q9JLR1 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Sec61a2Q9JLR1 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
Sec61a2Q9JLR1 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Sec61a2Q9JLR1 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Sec61a2Q9JLR1 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
Sec61a2Q9JLR1 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Sec61a2Q9JLR1 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
Sec61a2Q9JLR1 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Sec61a2Q9JLR1 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Sec61a2Q9JLR1 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Sec61a2Q9JLR1 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Sec61a2Q9JLR1 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC15.8■□□□□ 0.12
Sec61a2Q9JLR1 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Sec61a2Q9JLR1 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Sec61a2Q9JLR1 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC15.8■□□□□ 0.12
Sec61a2Q9JLR1 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 20.1 ms