Protein–RNA interactions for Protein: Q9JIS7

Cacna1f, Voltage-dependent L-type calcium channel subunit alpha-1F, mousemouse

Predictions only

Length 1,985 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1fQ9JIS7 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC20.04■□□□□ 0.8
Cacna1fQ9JIS7 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Cacna1fQ9JIS7 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Cacna1fQ9JIS7 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Cacna1fQ9JIS7 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Cacna1fQ9JIS7 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Cacna1fQ9JIS7 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Cacna1fQ9JIS7 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
Cacna1fQ9JIS7 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Cacna1fQ9JIS7 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Cacna1fQ9JIS7 Golph3-205ENSMUST00000228671 2842 ntBASIC20.03■□□□□ 0.8
Cacna1fQ9JIS7 AC125350.1-201ENSMUST00000225115 903 ntBASIC20.03■□□□□ 0.8
Cacna1fQ9JIS7 Otx2os1-206ENSMUST00000228153 787 ntBASIC20.03■□□□□ 0.8
Cacna1fQ9JIS7 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
Cacna1fQ9JIS7 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Cacna1fQ9JIS7 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Cacna1fQ9JIS7 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Cacna1fQ9JIS7 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
Cacna1fQ9JIS7 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Cacna1fQ9JIS7 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
Cacna1fQ9JIS7 AC154855.1-201ENSMUST00000227353 1458 ntBASIC20.03■□□□□ 0.8
Cacna1fQ9JIS7 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC20.03■□□□□ 0.8
Cacna1fQ9JIS7 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Cacna1fQ9JIS7 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Cacna1fQ9JIS7 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Cacna1fQ9JIS7 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC20.02■□□□□ 0.8
Cacna1fQ9JIS7 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Cacna1fQ9JIS7 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Cacna1fQ9JIS7 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
Cacna1fQ9JIS7 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Cacna1fQ9JIS7 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
Cacna1fQ9JIS7 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC20.01■□□□□ 0.79
Cacna1fQ9JIS7 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Cacna1fQ9JIS7 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
Cacna1fQ9JIS7 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Cacna1fQ9JIS7 Gm6627-201ENSMUST00000218299 2386 ntBASIC20.01■□□□□ 0.79
Cacna1fQ9JIS7 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Cacna1fQ9JIS7 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Cacna1fQ9JIS7 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Cacna1fQ9JIS7 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Cacna1fQ9JIS7 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Cacna1fQ9JIS7 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
Cacna1fQ9JIS7 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Cacna1fQ9JIS7 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC20.01■□□□□ 0.79
Cacna1fQ9JIS7 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Cacna1fQ9JIS7 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Cacna1fQ9JIS7 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Cacna1fQ9JIS7 Gm43272-201ENSMUST00000200599 1584 ntBASIC20.01■□□□□ 0.79
Cacna1fQ9JIS7 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC20.01■□□□□ 0.79
Cacna1fQ9JIS7 Gm45141-201ENSMUST00000206502 1888 ntBASIC20■□□□□ 0.79
Cacna1fQ9JIS7 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Cacna1fQ9JIS7 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Cacna1fQ9JIS7 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Cacna1fQ9JIS7 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
Cacna1fQ9JIS7 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Cacna1fQ9JIS7 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Cacna1fQ9JIS7 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC20■□□□□ 0.79
Cacna1fQ9JIS7 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
Cacna1fQ9JIS7 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC20■□□□□ 0.79
Cacna1fQ9JIS7 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC20■□□□□ 0.79
Cacna1fQ9JIS7 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Cacna1fQ9JIS7 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
Cacna1fQ9JIS7 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Cacna1fQ9JIS7 Gm10616-201ENSMUST00000205285 2127 ntBASIC19.99■□□□□ 0.79
Cacna1fQ9JIS7 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Cacna1fQ9JIS7 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Cacna1fQ9JIS7 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Cacna1fQ9JIS7 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Cacna1fQ9JIS7 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Cacna1fQ9JIS7 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Cacna1fQ9JIS7 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
Cacna1fQ9JIS7 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Cacna1fQ9JIS7 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
Cacna1fQ9JIS7 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
Cacna1fQ9JIS7 AC164629.2-201ENSMUST00000217916 270 ntBASIC19.99■□□□□ 0.79
Cacna1fQ9JIS7 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Cacna1fQ9JIS7 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Cacna1fQ9JIS7 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
Cacna1fQ9JIS7 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Cacna1fQ9JIS7 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Cacna1fQ9JIS7 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Cacna1fQ9JIS7 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Cacna1fQ9JIS7 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Cacna1fQ9JIS7 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Cacna1fQ9JIS7 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Cacna1fQ9JIS7 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Cacna1fQ9JIS7 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Cacna1fQ9JIS7 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Cacna1fQ9JIS7 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Cacna1fQ9JIS7 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Cacna1fQ9JIS7 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
Cacna1fQ9JIS7 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Cacna1fQ9JIS7 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC19.97■□□□□ 0.79
Cacna1fQ9JIS7 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Cacna1fQ9JIS7 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
Cacna1fQ9JIS7 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Cacna1fQ9JIS7 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Cacna1fQ9JIS7 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC19.97■□□□□ 0.79
Cacna1fQ9JIS7 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Cacna1fQ9JIS7 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC19.97■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 27.9 ms