Protein–RNA interactions for Protein: Q9DCR2

Ap3s1, AP-3 complex subunit sigma-1, mousemouse

Predictions only

Length 193 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ap3s1Q9DCR2 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Ap3s1Q9DCR2 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Ap3s1Q9DCR2 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.1
Ap3s1Q9DCR2 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Ap3s1Q9DCR2 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ap3s1Q9DCR2 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ap3s1Q9DCR2 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ap3s1Q9DCR2 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Ap3s1Q9DCR2 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ap3s1Q9DCR2 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
Ap3s1Q9DCR2 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ap3s1Q9DCR2 Idnk-204ENSMUST00000226010 1898 ntBASIC15.7■□□□□ 0.1
Ap3s1Q9DCR2 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ap3s1Q9DCR2 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Ap3s1Q9DCR2 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC15.7■□□□□ 0.1
Ap3s1Q9DCR2 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
Ap3s1Q9DCR2 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ap3s1Q9DCR2 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC15.7■□□□□ 0.1
Ap3s1Q9DCR2 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ap3s1Q9DCR2 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC15.7■□□□□ 0.1
Ap3s1Q9DCR2 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Ap3s1Q9DCR2 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Ap3s1Q9DCR2 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Ap3s1Q9DCR2 Gm38345-201ENSMUST00000192635 1748 ntBASIC15.69■□□□□ 0.1
Ap3s1Q9DCR2 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ap3s1Q9DCR2 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Ap3s1Q9DCR2 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC15.69■□□□□ 0.1
Ap3s1Q9DCR2 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ap3s1Q9DCR2 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC15.69■□□□□ 0.1
Ap3s1Q9DCR2 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ap3s1Q9DCR2 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC15.69■□□□□ 0.1
Ap3s1Q9DCR2 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC15.69■□□□□ 0.1
Ap3s1Q9DCR2 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ap3s1Q9DCR2 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Ap3s1Q9DCR2 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
Ap3s1Q9DCR2 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ap3s1Q9DCR2 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
Ap3s1Q9DCR2 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ap3s1Q9DCR2 Gm37563-201ENSMUST00000192580 1513 ntBASIC15.68■□□□□ 0.1
Ap3s1Q9DCR2 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Ap3s1Q9DCR2 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Ap3s1Q9DCR2 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ap3s1Q9DCR2 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ap3s1Q9DCR2 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
Ap3s1Q9DCR2 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ap3s1Q9DCR2 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ap3s1Q9DCR2 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Ap3s1Q9DCR2 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Ap3s1Q9DCR2 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC15.68■□□□□ 0.1
Ap3s1Q9DCR2 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC15.68■□□□□ 0.1
Ap3s1Q9DCR2 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Ap3s1Q9DCR2 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC15.68■□□□□ 0.1
Ap3s1Q9DCR2 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ap3s1Q9DCR2 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC15.68■□□□□ 0.1
Ap3s1Q9DCR2 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ap3s1Q9DCR2 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ap3s1Q9DCR2 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ap3s1Q9DCR2 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC15.67■□□□□ 0.1
Ap3s1Q9DCR2 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ap3s1Q9DCR2 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ap3s1Q9DCR2 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Ap3s1Q9DCR2 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC15.67■□□□□ 0.1
Ap3s1Q9DCR2 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ap3s1Q9DCR2 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ap3s1Q9DCR2 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC15.67■□□□□ 0.1
Ap3s1Q9DCR2 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ap3s1Q9DCR2 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Ap3s1Q9DCR2 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ap3s1Q9DCR2 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ap3s1Q9DCR2 AC165080.2-201ENSMUST00000217491 1530 ntBASIC15.67■□□□□ 0.1
Ap3s1Q9DCR2 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Ap3s1Q9DCR2 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
Ap3s1Q9DCR2 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ap3s1Q9DCR2 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ap3s1Q9DCR2 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
Ap3s1Q9DCR2 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
Ap3s1Q9DCR2 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ap3s1Q9DCR2 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC15.66■□□□□ 0.1
Ap3s1Q9DCR2 Gm11421-201ENSMUST00000122124 294 ntBASIC15.66■□□□□ 0.1
Ap3s1Q9DCR2 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC15.66■□□□□ 0.1
Ap3s1Q9DCR2 Gm9207-201ENSMUST00000198773 1115 ntBASIC15.66■□□□□ 0.1
Ap3s1Q9DCR2 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Ap3s1Q9DCR2 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC15.66■□□□□ 0.1
Ap3s1Q9DCR2 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC15.66■□□□□ 0.1
Ap3s1Q9DCR2 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC15.66■□□□□ 0.1
Ap3s1Q9DCR2 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ap3s1Q9DCR2 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Ap3s1Q9DCR2 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ap3s1Q9DCR2 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ap3s1Q9DCR2 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ap3s1Q9DCR2 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ap3s1Q9DCR2 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
Ap3s1Q9DCR2 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Ap3s1Q9DCR2 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ap3s1Q9DCR2 Hivep3-201ENSMUST00000084306 2973 ntBASIC15.66■□□□□ 0.1
Ap3s1Q9DCR2 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ap3s1Q9DCR2 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ap3s1Q9DCR2 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ap3s1Q9DCR2 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ap3s1Q9DCR2 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 36.8 ms