Protein–RNA interactions for Protein: Q9DA21

Smco2, Single-pass membrane and coiled-coil domain-containing protein 2, mousemouse

Predictions only

Length 347 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco2Q9DA21 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Smco2Q9DA21 AC135963.1-201ENSMUST00000211640 717 ntBASIC19.82■□□□□ 0.76
Smco2Q9DA21 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Smco2Q9DA21 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
Smco2Q9DA21 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Smco2Q9DA21 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Smco2Q9DA21 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC19.82■□□□□ 0.76
Smco2Q9DA21 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Smco2Q9DA21 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Smco2Q9DA21 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Smco2Q9DA21 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Smco2Q9DA21 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Smco2Q9DA21 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Smco2Q9DA21 Mir2861-201ENSMUST00000175539 82 ntBASIC19.81■□□□□ 0.76
Smco2Q9DA21 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Smco2Q9DA21 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Smco2Q9DA21 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Smco2Q9DA21 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Smco2Q9DA21 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Smco2Q9DA21 Gm7712-202ENSMUST00000222331 1510 ntBASIC19.81■□□□□ 0.76
Smco2Q9DA21 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC19.81■□□□□ 0.76
Smco2Q9DA21 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC19.81■□□□□ 0.76
Smco2Q9DA21 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
Smco2Q9DA21 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Smco2Q9DA21 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC19.8■□□□□ 0.76
Smco2Q9DA21 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
Smco2Q9DA21 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Smco2Q9DA21 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
Smco2Q9DA21 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC19.8■□□□□ 0.76
Smco2Q9DA21 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
Smco2Q9DA21 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
Smco2Q9DA21 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
Smco2Q9DA21 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
Smco2Q9DA21 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
Smco2Q9DA21 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
Smco2Q9DA21 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
Smco2Q9DA21 Gm7977-201ENSMUST00000193787 748 ntBASIC19.8■□□□□ 0.76
Smco2Q9DA21 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC19.8■□□□□ 0.76
Smco2Q9DA21 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Smco2Q9DA21 AC156016.1-201ENSMUST00000227190 1035 ntBASIC19.8■□□□□ 0.76
Smco2Q9DA21 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Smco2Q9DA21 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Smco2Q9DA21 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Smco2Q9DA21 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
Smco2Q9DA21 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC19.8■□□□□ 0.76
Smco2Q9DA21 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Smco2Q9DA21 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Smco2Q9DA21 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Smco2Q9DA21 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Smco2Q9DA21 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Smco2Q9DA21 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
Smco2Q9DA21 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Smco2Q9DA21 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Smco2Q9DA21 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Smco2Q9DA21 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Smco2Q9DA21 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
Smco2Q9DA21 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
Smco2Q9DA21 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
Smco2Q9DA21 Arhgef4-208ENSMUST00000211073 171 ntBASIC19.79■□□□□ 0.76
Smco2Q9DA21 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Smco2Q9DA21 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Smco2Q9DA21 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
Smco2Q9DA21 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Smco2Q9DA21 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Smco2Q9DA21 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Smco2Q9DA21 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Smco2Q9DA21 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Smco2Q9DA21 Gm38308-201ENSMUST00000194934 1809 ntBASIC19.79■□□□□ 0.76
Smco2Q9DA21 Dmtn-207ENSMUST00000228001 2437 ntBASIC19.78■□□□□ 0.76
Smco2Q9DA21 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
Smco2Q9DA21 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
Smco2Q9DA21 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Smco2Q9DA21 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC19.78■□□□□ 0.76
Smco2Q9DA21 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
Smco2Q9DA21 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
Smco2Q9DA21 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Smco2Q9DA21 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC19.78■□□□□ 0.76
Smco2Q9DA21 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Smco2Q9DA21 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Smco2Q9DA21 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Smco2Q9DA21 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
Smco2Q9DA21 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Smco2Q9DA21 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Smco2Q9DA21 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Smco2Q9DA21 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Smco2Q9DA21 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Smco2Q9DA21 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Smco2Q9DA21 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Smco2Q9DA21 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Smco2Q9DA21 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Smco2Q9DA21 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Smco2Q9DA21 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Smco2Q9DA21 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
Smco2Q9DA21 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Smco2Q9DA21 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Smco2Q9DA21 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Smco2Q9DA21 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Smco2Q9DA21 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Smco2Q9DA21 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Smco2Q9DA21 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 27.2 ms