Protein–RNA interactions for Protein: Q9D706

Rpap3, RNA polymerase II-associated protein 3, mousemouse

Predictions only

Length 660 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpap3Q9D706 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Rpap3Q9D706 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.7
Rpap3Q9D706 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC19.39■□□□□ 0.7
Rpap3Q9D706 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC19.39■□□□□ 0.7
Rpap3Q9D706 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Rpap3Q9D706 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Rpap3Q9D706 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Rpap3Q9D706 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Rpap3Q9D706 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Rpap3Q9D706 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Rpap3Q9D706 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC19.39■□□□□ 0.69
Rpap3Q9D706 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC19.39■□□□□ 0.69
Rpap3Q9D706 Gm7791-201ENSMUST00000219066 539 ntBASIC19.39■□□□□ 0.69
Rpap3Q9D706 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Rpap3Q9D706 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Rpap3Q9D706 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Rpap3Q9D706 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Rpap3Q9D706 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
Rpap3Q9D706 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
Rpap3Q9D706 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC19.39■□□□□ 0.69
Rpap3Q9D706 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Rpap3Q9D706 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Rpap3Q9D706 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
Rpap3Q9D706 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Rpap3Q9D706 Mir8112-201ENSMUST00000184382 131 ntBASIC19.38■□□□□ 0.69
Rpap3Q9D706 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Rpap3Q9D706 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Rpap3Q9D706 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Rpap3Q9D706 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Rpap3Q9D706 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Rpap3Q9D706 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Rpap3Q9D706 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
Rpap3Q9D706 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Rpap3Q9D706 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Rpap3Q9D706 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
Rpap3Q9D706 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC19.37■□□□□ 0.69
Rpap3Q9D706 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Rpap3Q9D706 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Rpap3Q9D706 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Rpap3Q9D706 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Rpap3Q9D706 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC19.37■□□□□ 0.69
Rpap3Q9D706 Mir5130-201ENSMUST00000175160 84 ntBASIC19.37■□□□□ 0.69
Rpap3Q9D706 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Rpap3Q9D706 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC19.37■□□□□ 0.69
Rpap3Q9D706 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Rpap3Q9D706 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC19.36■□□□□ 0.69
Rpap3Q9D706 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Rpap3Q9D706 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
Rpap3Q9D706 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
Rpap3Q9D706 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Rpap3Q9D706 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC19.36■□□□□ 0.69
Rpap3Q9D706 Gm4217-201ENSMUST00000182243 1002 ntBASIC19.36■□□□□ 0.69
Rpap3Q9D706 Gm9731-201ENSMUST00000209480 747 ntBASIC19.36■□□□□ 0.69
Rpap3Q9D706 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Rpap3Q9D706 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Rpap3Q9D706 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
Rpap3Q9D706 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Rpap3Q9D706 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC19.36■□□□□ 0.69
Rpap3Q9D706 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
Rpap3Q9D706 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC19.35■□□□□ 0.69
Rpap3Q9D706 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Rpap3Q9D706 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Rpap3Q9D706 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Rpap3Q9D706 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Rpap3Q9D706 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Rpap3Q9D706 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC19.35■□□□□ 0.69
Rpap3Q9D706 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Rpap3Q9D706 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Rpap3Q9D706 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Rpap3Q9D706 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
Rpap3Q9D706 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Rpap3Q9D706 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
Rpap3Q9D706 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Rpap3Q9D706 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
Rpap3Q9D706 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC19.34■□□□□ 0.69
Rpap3Q9D706 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Rpap3Q9D706 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Rpap3Q9D706 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
Rpap3Q9D706 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Rpap3Q9D706 Gm18032-201ENSMUST00000222541 538 ntBASIC19.34■□□□□ 0.69
Rpap3Q9D706 Il3ra-202ENSMUST00000223589 738 ntBASIC19.34■□□□□ 0.69
Rpap3Q9D706 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
Rpap3Q9D706 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Rpap3Q9D706 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Rpap3Q9D706 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Rpap3Q9D706 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Rpap3Q9D706 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Rpap3Q9D706 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Rpap3Q9D706 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Rpap3Q9D706 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.69
Rpap3Q9D706 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.69
Rpap3Q9D706 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Rpap3Q9D706 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Rpap3Q9D706 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.69
Rpap3Q9D706 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.69
Rpap3Q9D706 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Rpap3Q9D706 Gm43272-201ENSMUST00000200599 1584 ntBASIC19.33■□□□□ 0.69
Rpap3Q9D706 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC19.33■□□□□ 0.69
Rpap3Q9D706 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Rpap3Q9D706 Gm16061-201ENSMUST00000122167 857 ntBASIC19.33■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 29.1 ms