Protein–RNA interactions for Protein: Q9D439

Cfap53, Cilia- and flagella-associated protein 53, mousemouse

Predictions only

Length 514 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cfap53Q9D439 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Cfap53Q9D439 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Cfap53Q9D439 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Cfap53Q9D439 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC19.28■□□□□ 0.68
Cfap53Q9D439 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Cfap53Q9D439 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Cfap53Q9D439 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Cfap53Q9D439 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Cfap53Q9D439 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Cfap53Q9D439 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Cfap53Q9D439 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Cfap53Q9D439 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Cfap53Q9D439 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Cfap53Q9D439 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Cfap53Q9D439 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Cfap53Q9D439 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Cfap53Q9D439 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Cfap53Q9D439 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Cfap53Q9D439 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC19.27■□□□□ 0.68
Cfap53Q9D439 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
Cfap53Q9D439 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Cfap53Q9D439 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Cfap53Q9D439 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Cfap53Q9D439 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Cfap53Q9D439 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Cfap53Q9D439 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC19.27■□□□□ 0.68
Cfap53Q9D439 Gm13158-201ENSMUST00000122007 736 ntBASIC19.27■□□□□ 0.68
Cfap53Q9D439 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC19.27■□□□□ 0.68
Cfap53Q9D439 Gm29791-202ENSMUST00000207888 369 ntBASIC19.27■□□□□ 0.68
Cfap53Q9D439 AC163280.1-201ENSMUST00000228194 1100 ntBASIC19.27■□□□□ 0.68
Cfap53Q9D439 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Cfap53Q9D439 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Cfap53Q9D439 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC19.27■□□□□ 0.68
Cfap53Q9D439 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
Cfap53Q9D439 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
Cfap53Q9D439 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Cfap53Q9D439 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Cfap53Q9D439 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC19.26■□□□□ 0.67
Cfap53Q9D439 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
Cfap53Q9D439 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Cfap53Q9D439 Idnk-204ENSMUST00000226010 1898 ntBASIC19.26■□□□□ 0.67
Cfap53Q9D439 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Cfap53Q9D439 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Cfap53Q9D439 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Cfap53Q9D439 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
Cfap53Q9D439 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
Cfap53Q9D439 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Cfap53Q9D439 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Cfap53Q9D439 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Cfap53Q9D439 Mir2861-201ENSMUST00000175539 82 ntBASIC19.26■□□□□ 0.67
Cfap53Q9D439 Mir6349-201ENSMUST00000184059 97 ntBASIC19.26■□□□□ 0.67
Cfap53Q9D439 Alkbh1-212ENSMUST00000185301 408 ntBASIC19.26■□□□□ 0.67
Cfap53Q9D439 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC19.26■□□□□ 0.67
Cfap53Q9D439 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Cfap53Q9D439 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Cfap53Q9D439 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Cfap53Q9D439 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Cfap53Q9D439 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Cfap53Q9D439 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Cfap53Q9D439 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC19.26■□□□□ 0.67
Cfap53Q9D439 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
Cfap53Q9D439 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Cfap53Q9D439 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Cfap53Q9D439 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Cfap53Q9D439 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Cfap53Q9D439 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Cfap53Q9D439 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
Cfap53Q9D439 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Cfap53Q9D439 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Cfap53Q9D439 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Cfap53Q9D439 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
Cfap53Q9D439 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Cfap53Q9D439 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Cfap53Q9D439 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Cfap53Q9D439 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Cfap53Q9D439 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Cfap53Q9D439 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Cfap53Q9D439 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Cfap53Q9D439 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
Cfap53Q9D439 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Cfap53Q9D439 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC19.25■□□□□ 0.67
Cfap53Q9D439 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Cfap53Q9D439 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Cfap53Q9D439 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Cfap53Q9D439 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Cfap53Q9D439 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Cfap53Q9D439 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Cfap53Q9D439 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Cfap53Q9D439 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
Cfap53Q9D439 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Cfap53Q9D439 Gm15375-201ENSMUST00000119510 849 ntBASIC19.24■□□□□ 0.67
Cfap53Q9D439 Gm29241-201ENSMUST00000189260 1096 ntBASIC19.24■□□□□ 0.67
Cfap53Q9D439 Trmt13-210ENSMUST00000198454 880 ntBASIC19.24■□□□□ 0.67
Cfap53Q9D439 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Cfap53Q9D439 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
Cfap53Q9D439 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Cfap53Q9D439 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
Cfap53Q9D439 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Cfap53Q9D439 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Cfap53Q9D439 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC19.23■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 27 ms