Protein–RNA interactions for Protein: Q9D0F6

Rfc5, Replication factor C subunit 5, mousemouse

Predictions only

Length 339 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfc5Q9D0F6 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Rfc5Q9D0F6 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Rfc5Q9D0F6 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Rfc5Q9D0F6 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Rfc5Q9D0F6 Gm12085-201ENSMUST00000119263 940 ntBASIC18.25■□□□□ 0.51
Rfc5Q9D0F6 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC18.25■□□□□ 0.51
Rfc5Q9D0F6 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Rfc5Q9D0F6 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC18.25■□□□□ 0.51
Rfc5Q9D0F6 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
Rfc5Q9D0F6 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Rfc5Q9D0F6 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Rfc5Q9D0F6 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
Rfc5Q9D0F6 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Rfc5Q9D0F6 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
Rfc5Q9D0F6 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Rfc5Q9D0F6 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Rfc5Q9D0F6 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC18.24■□□□□ 0.51
Rfc5Q9D0F6 AC135963.1-201ENSMUST00000211640 717 ntBASIC18.24■□□□□ 0.51
Rfc5Q9D0F6 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC18.24■□□□□ 0.51
Rfc5Q9D0F6 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC18.24■□□□□ 0.51
Rfc5Q9D0F6 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Rfc5Q9D0F6 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Rfc5Q9D0F6 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Rfc5Q9D0F6 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Rfc5Q9D0F6 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Rfc5Q9D0F6 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Rfc5Q9D0F6 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Rfc5Q9D0F6 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Rfc5Q9D0F6 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Rfc5Q9D0F6 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
Rfc5Q9D0F6 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Rfc5Q9D0F6 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Rfc5Q9D0F6 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Rfc5Q9D0F6 Gm20472-201ENSMUST00000174403 1240 ntBASIC18.23■□□□□ 0.51
Rfc5Q9D0F6 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Rfc5Q9D0F6 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Rfc5Q9D0F6 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Rfc5Q9D0F6 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
Rfc5Q9D0F6 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Rfc5Q9D0F6 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Rfc5Q9D0F6 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC18.22■□□□□ 0.51
Rfc5Q9D0F6 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC18.22■□□□□ 0.51
Rfc5Q9D0F6 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Rfc5Q9D0F6 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Rfc5Q9D0F6 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Rfc5Q9D0F6 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Rfc5Q9D0F6 Gm24841-201ENSMUST00000158676 357 ntBASIC18.22■□□□□ 0.51
Rfc5Q9D0F6 Gm38027-201ENSMUST00000192315 235 ntBASIC18.22■□□□□ 0.51
Rfc5Q9D0F6 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Rfc5Q9D0F6 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC18.22■□□□□ 0.51
Rfc5Q9D0F6 Gm30025-201ENSMUST00000218555 728 ntBASIC18.22■□□□□ 0.51
Rfc5Q9D0F6 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Rfc5Q9D0F6 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Rfc5Q9D0F6 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Rfc5Q9D0F6 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
Rfc5Q9D0F6 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Rfc5Q9D0F6 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Rfc5Q9D0F6 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
Rfc5Q9D0F6 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Rfc5Q9D0F6 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
Rfc5Q9D0F6 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Rfc5Q9D0F6 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Rfc5Q9D0F6 Mir8112-201ENSMUST00000184382 131 ntBASIC18.21■□□□□ 0.51
Rfc5Q9D0F6 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
Rfc5Q9D0F6 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Rfc5Q9D0F6 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
Rfc5Q9D0F6 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Rfc5Q9D0F6 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Rfc5Q9D0F6 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Rfc5Q9D0F6 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Rfc5Q9D0F6 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Rfc5Q9D0F6 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Rfc5Q9D0F6 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
Rfc5Q9D0F6 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC18.2■□□□□ 0.5
Rfc5Q9D0F6 Gm15565-201ENSMUST00000118890 427 ntBASIC18.2■□□□□ 0.5
Rfc5Q9D0F6 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Rfc5Q9D0F6 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
Rfc5Q9D0F6 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC18.2■□□□□ 0.5
Rfc5Q9D0F6 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
Rfc5Q9D0F6 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Rfc5Q9D0F6 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Rfc5Q9D0F6 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC18.2■□□□□ 0.5
Rfc5Q9D0F6 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Rfc5Q9D0F6 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Rfc5Q9D0F6 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Rfc5Q9D0F6 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Rfc5Q9D0F6 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Rfc5Q9D0F6 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Rfc5Q9D0F6 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Rfc5Q9D0F6 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Rfc5Q9D0F6 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC18.19■□□□□ 0.5
Rfc5Q9D0F6 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Rfc5Q9D0F6 Gm5828-201ENSMUST00000071842 1860 ntBASIC18.19■□□□□ 0.5
Rfc5Q9D0F6 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
Rfc5Q9D0F6 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Rfc5Q9D0F6 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Rfc5Q9D0F6 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Rfc5Q9D0F6 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Rfc5Q9D0F6 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Rfc5Q9D0F6 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 23.6 ms